CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 829 | M829I | M1647I | nonsyn | atG | atT | 2623 | 1709 | 0.651544 | 5204-5206 |
ORF1ab/nsp3 | 829 | M829I | M1647I | nonsyn | atG | atA | 2623 | 756 | 0.28822 | 5204-5206 |
ORF1ab/nsp3 | 829 | M829I | M1647I | nonsyn | atG | atC | 2623 | 158 | 0.0602364 | 5204-5206 |
Details of the mutation M829I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1709 | 2623 | All | 0.000327 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 756 | 2623 | All | 0.000145 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 158 | 2623 | All | 0.00003 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 595 | 733 | B.1.1.7 | 0.000533 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 83 | 733 | B.1.1.7 | 0.000074 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 55 | 733 | B.1.1.7 | 0.000049 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 202 | 249 | AY.4 | 0.000314 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 43 | 249 | AY.4 | 0.000067 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 4 | 249 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 245 | 246 | AY.5 | 0.005059 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 246 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 92 | 107 | B.1.617.2 | 0.000346 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 9 | 107 | B.1.617.2 | 0.000034 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 6 | 107 | B.1.617.2 | 0.000023 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 70 | 83 | B.1 | 0.000641 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 13 | 83 | B.1 | 0.000119 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 72 | 72 | B.1.243 | 0.00501 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 71 | 71 | B.1.1.10 | 0.079153 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 66 | 66 | B.1.552 | 1 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 32 | 57 | B.1.2 | 0.000282 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 25 | 57 | B.1.2 | 0.00022 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 45 | 53 | B.1.1 | 0.000816 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 6 | 53 | B.1.1 | 0.000109 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 53 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 53 | 53 | B.1.1.231 | 0.164087 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 47 | 52 | AY.43 | 0.000208 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 4 | 52 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 52 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 26 | 36 | AY.102 | 0.000689 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 9 | 36 | AY.102 | 0.000239 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 36 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 29 | 36 | AY.44 | 0.000177 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 6 | 36 | AY.44 | 0.000037 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 36 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 33 | 35 | AY.39 | 0.000815 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 35 | AY.39 | 0.000049 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 29 | 29 | B.1.1.214 | 0.001608 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 26 | 26 | B.1.527 | 0.096296 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 25 | 25 | B.1.467 | 1 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 23 | 23 | B.1.1.50 | 0.015614 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 14 | 23 | P.1 | 0.000221 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 6 | 23 | P.1 | 0.000095 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 3 | 23 | P.1 | 0.000047 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 13 | 21 | AY.25 | 0.000078 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 8 | 21 | AY.25 | 0.000048 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 15 | 20 | AY.3 | 0.000149 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 4 | 20 | AY.3 | 0.00004 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 20 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 7 | 20 | B.1.427 | 0.000353 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 7 | 20 | B.1.427 | 0.000353 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 6 | 20 | B.1.427 | 0.000303 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 20 | 20 | Q.1 | 0.002527 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 19 | 19 | AY.4.1 | 0.014012 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 19 | 19 | B.1.1.317 | 0.007822 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 15 | 19 | B.1.160 | 0.000468 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 2 | 19 | B.1.160 | 0.000062 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 19 | B.1.160 | 0.000062 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 17 | 17 | B.1.1.434 | 0.005925 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 17 | 17 | B.1.1.519 | 0.000675 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 15 | 15 | AY.26 | 0.000425 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 15 | 15 | B.1.617.1 | 0.001934 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 14 | 14 | B.1.36 | 0.002043 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 13 | 13 | B.1.160.30 | 0.03869 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 11 | 12 | B.1.429 | 0.000259 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 12 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 10 | 11 | AY.103 | 0.000062 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 11 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 7 | 11 | B.1.177 | 0.000092 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 2 | 11 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 11 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 9 | 10 | AY.4.2 | 0.000195 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 10 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 6 | 8 | AY.9.1 | 0.000502 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 8 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 8 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 7 | 7 | B.1.1.222 | 0.001428 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 5 | 6 | AY.42 | 0.000201 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 6 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 4 | 6 | AY.84 | 0.00175 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 6 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 6 | 6 | B.1.1.356 | 0.051282 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 6 | 6 | P.2 | 0.00112 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 5 | 5 | B.1.526 | 0.000118 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 3 | 4 | AY.100 | 0.000138 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 4 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 4 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 4 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 3 | 4 | AY.27 | 0.000194 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 4 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 4 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 4 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 4 | 4 | AY.99.1 | 0.006211 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 4 | 4 | B.1.1.433 | 0.005698 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 4 | 4 | B.1.362 | 0.006163 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 3 | B.1.346 | 0.003932 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 3 | B.1.621 | 0.000177 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 3 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 2 | 3 | D.2 | 0.00015 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 3 | D.2 | 0.000075 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 2 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 2 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 2 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 2 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.1.194 | 0.009901 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.1.269 | 0.002706 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.1.305 | 0.007722 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.1.369 | 0.000892 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.177.56 | 0.001335 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.258.14 | 0.001961 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.470 | 0.002809 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 2 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 2 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AE.1 | 0.011364 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | AY.5.1 | 0.003759 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | B.1.1.132 | 0.014925 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.145 | 0.037037 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.181 | 0.004545 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.218 | 0.007692 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.261 | 0.008621 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp3 | 829 | M829I | atG | atA | 1 | 1 | B.1.1.373 | 0.02381 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.389 | 0.006061 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.485 | 0.016667 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.118 | 0.006711 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.39 | 0.015385 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.36.12 | 0.009615 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.36.37 | 0.002778 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.381 | 0.007812 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.587 | 0.001898 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | B.10 | 0.008264 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp3 | 829 | M829I | atG | atT | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp3 | 829 | M829I | atG | atC | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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