CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1788 | M1788I | M2606I | nonsyn | atG | atA | 53242 | 52693 | 0.989689 | 8081-8083 |
ORF1ab/nsp3 | 1788 | M1788I | M2606I | nonsyn | atG | atT | 53242 | 525 | 0.00986064 | 8081-8083 |
ORF1ab/nsp3 | 1788 | M1788I | M2606I | nonsyn | atG | atC | 53242 | 24 | 0.000450772 | 8081-8083 |
Details of the mutation M1788I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 52693 | 53242 | All | 0.010078 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 525 | 53242 | All | 0.0001 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 24 | 53242 | All | 0.000005 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 51176 | 51177 | B.1.2 | 0.450624 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 51177 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 645 | 645 | B.1.596 | 0.056204 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 434 | 446 | B.1 | 0.003975 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 12 | 446 | B.1 | 0.00011 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 117 | 184 | B.1.1.7 | 0.000105 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 67 | 184 | B.1.1.7 | 0.00006 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 52 | 62 | AY.4 | 0.000081 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 9 | 62 | AY.4 | 0.000014 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 62 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 37 | 52 | AY.25 | 0.000223 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 15 | 52 | AY.25 | 0.00009 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 35 | 52 | B.1.617.2 | 0.000132 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 17 | 52 | B.1.617.2 | 0.000064 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 37 | 45 | B.1.1 | 0.000671 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 8 | 45 | B.1.1 | 0.000145 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 28 | 30 | AY.43 | 0.000124 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 30 | AY.43 | 0.000009 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 24 | 30 | P.1 | 0.000378 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 6 | 30 | P.1 | 0.000095 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 15 | 28 | B.1.429 | 0.000353 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 12 | 28 | B.1.429 | 0.000282 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 28 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 27 | 27 | B.1.1.519 | 0.001072 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 10 | 21 | AY.103 | 0.000062 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 10 | 21 | AY.103 | 0.000062 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 21 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 18 | 18 | B.1.1.39 | 0.009174 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 12 | 16 | AY.3 | 0.000119 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 4 | 16 | AY.3 | 0.00004 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 16 | 16 | B.1.258 | 0.001065 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 16 | 16 | B.1.595 | 0.004175 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 15 | 15 | B.1.177.73 | 0.008494 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 15 | 15 | B.1.408 | 0.055351 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 12 | 12 | B.1.1.214 | 0.000665 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 12 | 12 | B.1.234 | 0.001583 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 12 | 12 | C.16 | 0.012725 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 7 | 10 | AY.26 | 0.000198 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 3 | 10 | AY.26 | 0.000085 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 8 | 9 | AY.29 | 0.000126 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 9 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 6 | 9 | B.1.526 | 0.000141 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 9 | B.1.526 | 0.000071 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 8 | 8 | AY.4.2 | 0.000174 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 6 | 8 | B.1.177 | 0.000079 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 8 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 8 | 8 | B.1.243 | 0.000557 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 7 | 7 | B.1.503 | 0.017413 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 7 | 7 | B.1.580 | 0.028455 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 4 | 6 | AY.44 | 0.000024 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 6 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 4 | 6 | B | 0.000511 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 6 | B | 0.000256 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 6 | 6 | B.1.567 | 0.02 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 4 | 5 | AY.102 | 0.000106 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 5 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 5 | 5 | B.1.1.28 | 0.001556 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 5 | 5 | B.1.1.335 | 0.064935 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 4 | 5 | B.1.240 | 0.000862 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 5 | B.1.240 | 0.000216 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 5 | 5 | B.1.396 | 0.003529 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 5 | 5 | P.1.16 | 0.001871 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 4 | 4 | AY.119 | 0.000141 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 4 | 4 | AY.50 | 0.003197 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 4 | AY.9 | 0.000203 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 4 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 4 | 4 | AY.99 | 0.004197 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 3 | AY.23 | 0.000139 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 3 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 3 | AY.39 | 0.000049 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 3 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 3 | AY.75 | 0.000112 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 3 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 3 | B.1.1.326 | 0.005282 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 3 | B.1.1.397 | 0.006757 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 3 | 3 | B.1.367 | 0.002377 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 3 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 3 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 3 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 3 | 3 | B.1.404 | 0.003906 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 3 | 3 | B.1.577 | 0.002062 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 3 | B.1.623 | 0.001073 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 3 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | AZ.2 | 0.000821 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | AZ.2 | 0.000821 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.1.192 | 0.004619 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 2 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.206 | 0.001631 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.214 | 0.007326 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.265 | 0.002541 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 2 | 2 | B.1.521 | 0.00995 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 2 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 2 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.1.134 | 0.011364 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.158 | 0.012195 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.177 | 0.019231 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 1 | B.1.1.266 | 0.012195 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.5 | 0.008333 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.177.72 | 0.00339 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.211 | 0.025 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.264 | 0.012346 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.363 | 0.012987 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.443 | 0.004673 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atC | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.566 | 0.019231 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.585 | 0.027778 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | B.1.81 | 0.021277 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atT | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp3 | 1788 | M1788I | atG | atA | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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