CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = M1788I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31788M1788IM2606InonsynatGatA53242526930.9896898081-8083
ORF1ab/nsp31788M1788IM2606InonsynatGatT532425250.009860648081-8083
ORF1ab/nsp31788M1788IM2606InonsynatGatC53242240.0004507728081-8083

Details of the mutation M1788I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31788M1788IatGatA5269353242All0.010078
ORF1ab/nsp31788M1788IatGatT52553242All0.0001
ORF1ab/nsp31788M1788IatGatC2453242All0.000005
ORF1ab/nsp31788M1788IatGatA5117651177B.1.20.450624
ORF1ab/nsp31788M1788IatGatT151177B.1.20.000009
ORF1ab/nsp31788M1788IatGatA645645B.1.5960.056204
ORF1ab/nsp31788M1788IatGatA434446B.10.003975
ORF1ab/nsp31788M1788IatGatT12446B.10.00011
ORF1ab/nsp31788M1788IatGatT117184B.1.1.70.000105
ORF1ab/nsp31788M1788IatGatA67184B.1.1.70.00006
ORF1ab/nsp31788M1788IatGatT5262AY.40.000081
ORF1ab/nsp31788M1788IatGatA962AY.40.000014
ORF1ab/nsp31788M1788IatGatC162AY.40.000002
ORF1ab/nsp31788M1788IatGatT3752AY.250.000223
ORF1ab/nsp31788M1788IatGatA1552AY.250.00009
ORF1ab/nsp31788M1788IatGatT3552B.1.617.20.000132
ORF1ab/nsp31788M1788IatGatA1752B.1.617.20.000064
ORF1ab/nsp31788M1788IatGatA3745B.1.10.000671
ORF1ab/nsp31788M1788IatGatT845B.1.10.000145
ORF1ab/nsp31788M1788IatGatT2830AY.430.000124
ORF1ab/nsp31788M1788IatGatA230AY.430.000009
ORF1ab/nsp31788M1788IatGatT2430P.10.000378
ORF1ab/nsp31788M1788IatGatA630P.10.000095
ORF1ab/nsp31788M1788IatGatA1528B.1.4290.000353
ORF1ab/nsp31788M1788IatGatT1228B.1.4290.000282
ORF1ab/nsp31788M1788IatGatC128B.1.4290.000024
ORF1ab/nsp31788M1788IatGatA2727B.1.1.5190.001072
ORF1ab/nsp31788M1788IatGatA1021AY.1030.000062
ORF1ab/nsp31788M1788IatGatT1021AY.1030.000062
ORF1ab/nsp31788M1788IatGatC121AY.1030.000006
ORF1ab/nsp31788M1788IatGatT1818B.1.1.390.009174
ORF1ab/nsp31788M1788IatGatT1216AY.30.000119
ORF1ab/nsp31788M1788IatGatA416AY.30.00004
ORF1ab/nsp31788M1788IatGatC1616B.1.2580.001065
ORF1ab/nsp31788M1788IatGatA1616B.1.5950.004175
ORF1ab/nsp31788M1788IatGatA1515B.1.177.730.008494
ORF1ab/nsp31788M1788IatGatA1515B.1.4080.055351
ORF1ab/nsp31788M1788IatGatT1212B.1.1.2140.000665
ORF1ab/nsp31788M1788IatGatA1212B.1.2340.001583
ORF1ab/nsp31788M1788IatGatA1212C.160.012725
ORF1ab/nsp31788M1788IatGatT710AY.260.000198
ORF1ab/nsp31788M1788IatGatA310AY.260.000085
ORF1ab/nsp31788M1788IatGatT89AY.290.000126
ORF1ab/nsp31788M1788IatGatA19AY.290.000016
ORF1ab/nsp31788M1788IatGatA69B.1.5260.000141
ORF1ab/nsp31788M1788IatGatT39B.1.5260.000071
ORF1ab/nsp31788M1788IatGatT88AY.4.20.000174
ORF1ab/nsp31788M1788IatGatT68B.1.1770.000079
ORF1ab/nsp31788M1788IatGatA28B.1.1770.000026
ORF1ab/nsp31788M1788IatGatA88B.1.2430.000557
ORF1ab/nsp31788M1788IatGatT77B.1.5030.017413
ORF1ab/nsp31788M1788IatGatA77B.1.5800.028455
ORF1ab/nsp31788M1788IatGatA46AY.440.000024
ORF1ab/nsp31788M1788IatGatT26AY.440.000012
ORF1ab/nsp31788M1788IatGatA46B0.000511
ORF1ab/nsp31788M1788IatGatT26B0.000256
ORF1ab/nsp31788M1788IatGatA66B.1.5670.02
ORF1ab/nsp31788M1788IatGatT45AY.1020.000106
ORF1ab/nsp31788M1788IatGatA15AY.1020.000027
ORF1ab/nsp31788M1788IatGatT55B.1.1.280.001556
ORF1ab/nsp31788M1788IatGatA55B.1.1.3350.064935
ORF1ab/nsp31788M1788IatGatA45B.1.2400.000862
ORF1ab/nsp31788M1788IatGatT15B.1.2400.000216
ORF1ab/nsp31788M1788IatGatA55B.1.3960.003529
ORF1ab/nsp31788M1788IatGatT55P.1.160.001871
ORF1ab/nsp31788M1788IatGatT44AY.1190.000141
ORF1ab/nsp31788M1788IatGatT44AY.500.003197
ORF1ab/nsp31788M1788IatGatT34AY.90.000203
ORF1ab/nsp31788M1788IatGatA14AY.90.000068
ORF1ab/nsp31788M1788IatGatT44AY.990.004197
ORF1ab/nsp31788M1788IatGatT44B.1.1.3170.001647
ORF1ab/nsp31788M1788IatGatA23AY.230.000139
ORF1ab/nsp31788M1788IatGatT13AY.230.00007
ORF1ab/nsp31788M1788IatGatT33AY.360.000445
ORF1ab/nsp31788M1788IatGatT23AY.390.000049
ORF1ab/nsp31788M1788IatGatA13AY.390.000025
ORF1ab/nsp31788M1788IatGatA23AY.750.000112
ORF1ab/nsp31788M1788IatGatT13AY.750.000056
ORF1ab/nsp31788M1788IatGatT33AY.9.20.00011
ORF1ab/nsp31788M1788IatGatT33B.1.1.3260.005282
ORF1ab/nsp31788M1788IatGatT33B.1.1.3970.006757
ORF1ab/nsp31788M1788IatGatA33B.1.1390.002199
ORF1ab/nsp31788M1788IatGatA33B.1.3670.002377
ORF1ab/nsp31788M1788IatGatT13B.1.3750.00082
ORF1ab/nsp31788M1788IatGatA13B.1.3750.00082
ORF1ab/nsp31788M1788IatGatC13B.1.3750.00082
ORF1ab/nsp31788M1788IatGatT33B.1.4040.003906
ORF1ab/nsp31788M1788IatGatA33B.1.5640.001278
ORF1ab/nsp31788M1788IatGatA33B.1.5770.002062
ORF1ab/nsp31788M1788IatGatT23B.1.6230.001073
ORF1ab/nsp31788M1788IatGatA13B.1.6230.000536
ORF1ab/nsp31788M1788IatGatT120.055556
ORF1ab/nsp31788M1788IatGatA120.055556
ORF1ab/nsp31788M1788IatGatT22A.10.000564
ORF1ab/nsp31788M1788IatGatA22AY.1170.000169
ORF1ab/nsp31788M1788IatGatA12AY.1200.000037
ORF1ab/nsp31788M1788IatGatT12AY.1200.000037
ORF1ab/nsp31788M1788IatGatT22AY.39.10.000079
ORF1ab/nsp31788M1788IatGatT22AY.420.00008
ORF1ab/nsp31788M1788IatGatT12AY.470.000031
ORF1ab/nsp31788M1788IatGatA12AY.470.000031
ORF1ab/nsp31788M1788IatGatT12AY.75.10.00018
ORF1ab/nsp31788M1788IatGatA12AY.75.10.00018
ORF1ab/nsp31788M1788IatGatT22AY.980.000158
ORF1ab/nsp31788M1788IatGatA22AY.99.20.000184
ORF1ab/nsp31788M1788IatGatT12AZ.20.000821
ORF1ab/nsp31788M1788IatGatA12AZ.20.000821
ORF1ab/nsp31788M1788IatGatT22B.1.1.10.000653
ORF1ab/nsp31788M1788IatGatA22B.1.1.1920.004619
ORF1ab/nsp31788M1788IatGatA22B.1.1.2160.001781
ORF1ab/nsp31788M1788IatGatT12B.1.1.2840.000107
ORF1ab/nsp31788M1788IatGatC12B.1.1.2840.000107
ORF1ab/nsp31788M1788IatGatA22B.1.177.860.000367
ORF1ab/nsp31788M1788IatGatA22B.1.2060.001631
ORF1ab/nsp31788M1788IatGatA22B.1.2140.007326
ORF1ab/nsp31788M1788IatGatT12B.1.2320.000537
ORF1ab/nsp31788M1788IatGatA12B.1.2320.000537
ORF1ab/nsp31788M1788IatGatA22B.1.2650.002541
ORF1ab/nsp31788M1788IatGatA22B.1.3510.000059
ORF1ab/nsp31788M1788IatGatA22B.1.3690.00057
ORF1ab/nsp31788M1788IatGatA22B.1.4270.000101
ORF1ab/nsp31788M1788IatGatT22B.1.5210.00995
ORF1ab/nsp31788M1788IatGatA22B.1.5820.000981
ORF1ab/nsp31788M1788IatGatA12P.1.120.000484
ORF1ab/nsp31788M1788IatGatT12P.1.120.000484
ORF1ab/nsp31788M1788IatGatC11A.2.40.003367
ORF1ab/nsp31788M1788IatGatA11A.2.5.10.004808
ORF1ab/nsp31788M1788IatGatT11A.23.10.000704
ORF1ab/nsp31788M1788IatGatA11AD.20.000219
ORF1ab/nsp31788M1788IatGatT11AY.1160.000287
ORF1ab/nsp31788M1788IatGatA11AY.1180.000063
ORF1ab/nsp31788M1788IatGatT11AY.120.000316
ORF1ab/nsp31788M1788IatGatT11AY.1210.000135
ORF1ab/nsp31788M1788IatGatT11AY.140.000088
ORF1ab/nsp31788M1788IatGatT11AY.160.00038
ORF1ab/nsp31788M1788IatGatA11AY.200.000039
ORF1ab/nsp31788M1788IatGatT11AY.3.10.000085
ORF1ab/nsp31788M1788IatGatA11AY.46.10.001027
ORF1ab/nsp31788M1788IatGatA11AY.50.000021
ORF1ab/nsp31788M1788IatGatA11AY.5.30.000337
ORF1ab/nsp31788M1788IatGatA11AY.520.000814
ORF1ab/nsp31788M1788IatGatA11AY.570.000656
ORF1ab/nsp31788M1788IatGatA11AY.60.000041
ORF1ab/nsp31788M1788IatGatT11AY.640.000595
ORF1ab/nsp31788M1788IatGatT11AY.690.000187
ORF1ab/nsp31788M1788IatGatT11AY.9.10.000084
ORF1ab/nsp31788M1788IatGatT11AY.950.000761
ORF1ab/nsp31788M1788IatGatT11B.1.1.1340.011364
ORF1ab/nsp31788M1788IatGatA11B.1.1.1580.012195
ORF1ab/nsp31788M1788IatGatA11B.1.1.1610.003534
ORF1ab/nsp31788M1788IatGatA11B.1.1.1770.019231
ORF1ab/nsp31788M1788IatGatA11B.1.1.2070.001182
ORF1ab/nsp31788M1788IatGatC11B.1.1.2660.012195
ORF1ab/nsp31788M1788IatGatT11B.1.1.2940.001266
ORF1ab/nsp31788M1788IatGatA11B.1.1.3060.000438
ORF1ab/nsp31788M1788IatGatT11B.1.1.330.000421
ORF1ab/nsp31788M1788IatGatA11B.1.1.3370.003597
ORF1ab/nsp31788M1788IatGatA11B.1.1.3480.000796
ORF1ab/nsp31788M1788IatGatA11B.1.1.4020.011111
ORF1ab/nsp31788M1788IatGatA11B.1.1.50.008333
ORF1ab/nsp31788M1788IatGatT11B.1.1.500.000679
ORF1ab/nsp31788M1788IatGatA11B.1.1.630.000386
ORF1ab/nsp31788M1788IatGatA11B.1.1110.001175
ORF1ab/nsp31788M1788IatGatT11B.1.1460.004237
ORF1ab/nsp31788M1788IatGatT11B.1.1470.000756
ORF1ab/nsp31788M1788IatGatA11B.1.1570.002985
ORF1ab/nsp31788M1788IatGatA11B.1.1600.000031
ORF1ab/nsp31788M1788IatGatT11B.1.177.350.000691
ORF1ab/nsp31788M1788IatGatA11B.1.177.70.000165
ORF1ab/nsp31788M1788IatGatT11B.1.177.720.00339
ORF1ab/nsp31788M1788IatGatA11B.1.2110.025
ORF1ab/nsp31788M1788IatGatA11B.1.2210.000071
ORF1ab/nsp31788M1788IatGatA11B.1.2640.012346
ORF1ab/nsp31788M1788IatGatA11B.1.2790.000514
ORF1ab/nsp31788M1788IatGatA11B.1.3110.000275
ORF1ab/nsp31788M1788IatGatA11B.1.3240.001605
ORF1ab/nsp31788M1788IatGatT11B.1.3360.002439
ORF1ab/nsp31788M1788IatGatA11B.1.3490.000715
ORF1ab/nsp31788M1788IatGatT11B.1.360.000146
ORF1ab/nsp31788M1788IatGatA11B.1.3610.001289
ORF1ab/nsp31788M1788IatGatA11B.1.3630.012987
ORF1ab/nsp31788M1788IatGatA11B.1.3820.008929
ORF1ab/nsp31788M1788IatGatA11B.1.3950.007042
ORF1ab/nsp31788M1788IatGatA11B.1.4000.000429
ORF1ab/nsp31788M1788IatGatA11B.1.4430.004673
ORF1ab/nsp31788M1788IatGatA11B.1.4480.002625
ORF1ab/nsp31788M1788IatGatT11B.1.5090.000866
ORF1ab/nsp31788M1788IatGatA11B.1.5170.000427
ORF1ab/nsp31788M1788IatGatA11B.1.5230.002451
ORF1ab/nsp31788M1788IatGatC11B.1.5250.000113
ORF1ab/nsp31788M1788IatGatA11B.1.5300.007143
ORF1ab/nsp31788M1788IatGatT11B.1.5330.009615
ORF1ab/nsp31788M1788IatGatA11B.1.5650.00081
ORF1ab/nsp31788M1788IatGatA11B.1.5660.019231
ORF1ab/nsp31788M1788IatGatA11B.1.5740.002151
ORF1ab/nsp31788M1788IatGatA11B.1.5760.000907
ORF1ab/nsp31788M1788IatGatA11B.1.5850.027778
ORF1ab/nsp31788M1788IatGatA11B.1.6090.000479
ORF1ab/nsp31788M1788IatGatA11B.1.6120.002653
ORF1ab/nsp31788M1788IatGatA11B.1.621.10.000506
ORF1ab/nsp31788M1788IatGatT11B.1.6370.000073
ORF1ab/nsp31788M1788IatGatA11B.1.810.021277
ORF1ab/nsp31788M1788IatGatT11C.140.004329
ORF1ab/nsp31788M1788IatGatT11P.1.140.000048
ORF1ab/nsp31788M1788IatGatT11P.1.150.000232
ORF1ab/nsp31788M1788IatGatA11Q.10.000126
ORF1ab/nsp31788M1788IatGatT11Q.40.000455
ORF1ab/nsp31788M1788IatGatA11R.10.00009