CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L944F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3944L944FL1762FnonsynCttTtt5545520.996395549-5551
ORF1ab/nsp3944L944FL1762FnonsynCtTTtC55420.003610115549-5551

Details of the mutation L944F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3944L944FCttTtt552554All0.000106
ORF1ab/nsp3944L944FCtTTtC2554All0
ORF1ab/nsp3944L944FCttTtt108108B.1.1.70.000097
ORF1ab/nsp3944L944FCttTtt4343AY.270.002783
ORF1ab/nsp3944L944FCttTtt4242M.10.976744
ORF1ab/nsp3944L944FCttTtt3434AY.60.001398
ORF1ab/nsp3944L944FCttTtt3131B.1.4270.001565
ORF1ab/nsp3944L944FCttTtt2121B.1.617.20.000079
ORF1ab/nsp3944L944FCttTtt1717AY.130.002737
ORF1ab/nsp3944L944FCttTtt1515AY.40.000023
ORF1ab/nsp3944L944FCttTtt1414AY.1030.000087
ORF1ab/nsp3944L944FCttTtt1313B.1.1600.000405
ORF1ab/nsp3944L944FCttTtt1212AY.730.007984
ORF1ab/nsp3944L944FCttTtt1212B.1.5510.015484
ORF1ab/nsp3944L944FCttTtt1111AY.440.000067
ORF1ab/nsp3944L944FCttTtt1111B.1.20.000097
ORF1ab/nsp3944L944FCttTtt1111B.1.6210.000974
ORF1ab/nsp3944L944FCttTtt99AY.250.000054
ORF1ab/nsp3944L944FCttTtt99B.10.000082
ORF1ab/nsp3944L944FCttTtt88P.10.000126
ORF1ab/nsp3944L944FCttTtt77B.1.6230.003755
ORF1ab/nsp3944L944FCttTtt66AY.1020.000159
ORF1ab/nsp3944L944FCttTtt66AY.200.000233
ORF1ab/nsp3944L944FCttTtt66B.1.10.000109
ORF1ab/nsp3944L944FCttTtt66P.1.140.000287
ORF1ab/nsp3944L944FCttTtt55AY.470.000156
ORF1ab/nsp3944L944FCttTtt55AY.700.001043
ORF1ab/nsp3944L944FCttTtt55B.1.5260.000118
ORF1ab/nsp3944L944FCttTtt44AY.30.00004
ORF1ab/nsp3944L944FCttTtt44Q.10.000505
ORF1ab/nsp3944L944FCttTtt33AY.1000.000138
ORF1ab/nsp3944L944FCttTtt33AY.50.000062
ORF1ab/nsp3944L944FCttTtt33AY.75.10.000541
ORF1ab/nsp3944L944FCttTtt33B.400.001093
ORF1ab/nsp3944L944FCtTTtC220.111111
ORF1ab/nsp3944L944FCttTtt22AY.230.000139
ORF1ab/nsp3944L944FCttTtt22AY.260.000057
ORF1ab/nsp3944L944FCttTtt22AY.390.000049
ORF1ab/nsp3944L944FCttTtt22AY.4.20.000043
ORF1ab/nsp3944L944FCttTtt22AY.430.000009
ORF1ab/nsp3944L944FCttTtt22B.1.1.2940.002532
ORF1ab/nsp3944L944FCttTtt22B.1.1.5190.000079
ORF1ab/nsp3944L944FCttTtt22B.1.177.320.002699
ORF1ab/nsp3944L944FCttTtt22B.1.2580.000133
ORF1ab/nsp3944L944FCttTtt22B.1.3240.00321
ORF1ab/nsp3944L944FCttTtt22B.1.4290.000047
ORF1ab/nsp3944L944FCttTtt22B.1.5250.000226
ORF1ab/nsp3944L944FCttTtt22N.90.011905
ORF1ab/nsp3944L944FCttTtt11A.280.002646
ORF1ab/nsp3944L944FCttTtt11AE.80.000489
ORF1ab/nsp3944L944FCttTtt11AY.1160.000287
ORF1ab/nsp3944L944FCttTtt11AY.116.10.000311
ORF1ab/nsp3944L944FCttTtt11AY.330.000067
ORF1ab/nsp3944L944FCttTtt11AY.350.000233
ORF1ab/nsp3944L944FCttTtt11AY.360.000148
ORF1ab/nsp3944L944FCttTtt11AY.460.000104
ORF1ab/nsp3944L944FCttTtt11AY.550.000917
ORF1ab/nsp3944L944FCttTtt11AY.680.000274
ORF1ab/nsp3944L944FCttTtt11AY.690.000187
ORF1ab/nsp3944L944FCttTtt11AY.9.20.000037
ORF1ab/nsp3944L944FCttTtt11AY.950.000761
ORF1ab/nsp3944L944FCttTtt11B.1.1.100.001115
ORF1ab/nsp3944L944FCttTtt11B.1.1.1740.003378
ORF1ab/nsp3944L944FCttTtt11B.1.1.330.000421
ORF1ab/nsp3944L944FCttTtt11B.1.1.4860.001577
ORF1ab/nsp3944L944FCttTtt11B.1.1110.001175
ORF1ab/nsp3944L944FCttTtt11B.1.1770.000013
ORF1ab/nsp3944L944FCttTtt11B.1.177.600.000218
ORF1ab/nsp3944L944FCttTtt11B.1.2320.000537
ORF1ab/nsp3944L944FCttTtt11B.1.2340.000132
ORF1ab/nsp3944L944FCttTtt11B.1.2430.00007
ORF1ab/nsp3944L944FCttTtt11B.1.3200.001245
ORF1ab/nsp3944L944FCttTtt11B.1.3490.000715
ORF1ab/nsp3944L944FCttTtt11B.1.3510.00003
ORF1ab/nsp3944L944FCttTtt11B.1.360.000146
ORF1ab/nsp3944L944FCttTtt11B.1.3690.000285
ORF1ab/nsp3944L944FCttTtt11B.1.438.10.000107
ORF1ab/nsp3944L944FCttTtt11B.1.5380.008065
ORF1ab/nsp3944L944FCttTtt11B.1.564.10.001577
ORF1ab/nsp3944L944FCttTtt11B.1.5750.000303
ORF1ab/nsp3944L944FCttTtt11B.1.5810.009434
ORF1ab/nsp3944L944FCttTtt11B.1.5880.00091
ORF1ab/nsp3944L944FCttTtt11B.60.00091
ORF1ab/nsp3944L944FCttTtt11D.20.000075
ORF1ab/nsp3944L944FCttTtt11P.1.170.000162
ORF1ab/nsp3944L944FCttTtt11P.30.001595
ORF1ab/nsp3944L944FCttTtt11Q.80.000165