CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L862F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3862L862FL1680FnonsynttGttT11018880.806545303-5305
ORF1ab/nsp3862L862FL1680FnonsynttGttC11012130.193465303-5305

Details of the mutation L862F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3862L862FttGttT8881101All0.00017
ORF1ab/nsp3862L862FttGttC2131101All0.000041
ORF1ab/nsp3862L862FttGttC123209AY.40.000191
ORF1ab/nsp3862L862FttGttT86209AY.40.000134
ORF1ab/nsp3862L862FttGttT162173B.1.617.20.00061
ORF1ab/nsp3862L862FttGttC11173B.1.617.20.000041
ORF1ab/nsp3862L862FttGttT7985B.1.1.70.000071
ORF1ab/nsp3862L862FttGttC685B.1.1.70.000005
ORF1ab/nsp3862L862FttGttT7676AY.430.000337
ORF1ab/nsp3862L862FttGttC3744B.1.20.000326
ORF1ab/nsp3862L862FttGttT744B.1.20.000062
ORF1ab/nsp3862L862FttGttT3044D.20.002251
ORF1ab/nsp3862L862FttGttC1444D.20.001051
ORF1ab/nsp3862L862FttGttT4040AY.30.000398
ORF1ab/nsp3862L862FttGttT3839B.10.000348
ORF1ab/nsp3862L862FttGttC139B.10.000009
ORF1ab/nsp3862L862FttGttT3435AY.330.00227
ORF1ab/nsp3862L862FttGttC135AY.330.000067
ORF1ab/nsp3862L862FttGttT3535AY.440.000213
ORF1ab/nsp3862L862FttGttT2424AY.1200.000892
ORF1ab/nsp3862L862FttGttT2121AY.250.000126
ORF1ab/nsp3862L862FttGttT1717AY.1020.000451
ORF1ab/nsp3862L862FttGttT1717B.1.4290.0004
ORF1ab/nsp3862L862FttGttT1516B.1.10.000272
ORF1ab/nsp3862L862FttGttC116B.1.10.000018
ORF1ab/nsp3862L862FttGttT1616P.20.002986
ORF1ab/nsp3862L862FttGttT1213AY.1030.000075
ORF1ab/nsp3862L862FttGttC113AY.1030.000006
ORF1ab/nsp3862L862FttGttT1111AY.7.10.00124
ORF1ab/nsp3862L862FttGttT910AY.390.000222
ORF1ab/nsp3862L862FttGttC110AY.390.000025
ORF1ab/nsp3862L862FttGttT1010AY.710.004751
ORF1ab/nsp3862L862FttGttT1010B.1.1.280.003112
ORF1ab/nsp3862L862FttGttT88AY.260.000226
ORF1ab/nsp3862L862FttGttT88B.1.36.10.009122
ORF1ab/nsp3862L862FttGttT77B.1.5610.002779
ORF1ab/nsp3862L862FttGttC55AY.560.008026
ORF1ab/nsp3862L862FttGttT55AY.810.00996
ORF1ab/nsp3862L862FttGttT55B.1.240.20.151515
ORF1ab/nsp3862L862FttGttT45B.1.2580.000266
ORF1ab/nsp3862L862FttGttC15B.1.2580.000067
ORF1ab/nsp3862L862FttGttT34AY.1190.000106
ORF1ab/nsp3862L862FttGttC14AY.1190.000035
ORF1ab/nsp3862L862FttGttT44AY.90.00027
ORF1ab/nsp3862L862FttGttT44B.1.1770.000053
ORF1ab/nsp3862L862FttGttT44P.10.000063
ORF1ab/nsp3862L862FttGttT33AY.1000.000138
ORF1ab/nsp3862L862FttGttT33AY.200.000117
ORF1ab/nsp3862L862FttGttT33AY.470.000093
ORF1ab/nsp3862L862FttGttT33AY.50.000062
ORF1ab/nsp3862L862FttGttT33B.1.1600.000094
ORF1ab/nsp3862L862FttGttT33B.1.177.810.000568
ORF1ab/nsp3862L862FttGttT23B.1.2230.005556
ORF1ab/nsp3862L862FttGttC13B.1.2230.002778
ORF1ab/nsp3862L862FttGttT33Q.40.001364
ORF1ab/nsp3862L862FttGttC22AY.1210.000271
ORF1ab/nsp3862L862FttGttT22AY.760.009662
ORF1ab/nsp3862L862FttGttT22AY.9.20.000073
ORF1ab/nsp3862L862FttGttT22AY.98.10.000097
ORF1ab/nsp3862L862FttGttT22B.1.1.3260.003521
ORF1ab/nsp3862L862FttGttT22B.1.1.4200.002012
ORF1ab/nsp3862L862FttGttT22B.1.177.540.001213
ORF1ab/nsp3862L862FttGttT22B.1.2410.001623
ORF1ab/nsp3862L862FttGttT22B.1.258.170.000208
ORF1ab/nsp3862L862FttGttT22B.1.360.000292
ORF1ab/nsp3862L862FttGttT22B.1.3670.001585
ORF1ab/nsp3862L862FttGttT22B.1.5070.022472
ORF1ab/nsp3862L862FttGttT22B.1.5250.000226
ORF1ab/nsp3862L862FttGttT22P.1.170.000324
ORF1ab/nsp3862L862FttGttT22P.1.40.001953
ORF1ab/nsp3862L862FttGttT11A.2.20.001689
ORF1ab/nsp3862L862FttGttC11AY.1010.00049
ORF1ab/nsp3862L862FttGttT11AY.1080.001103
ORF1ab/nsp3862L862FttGttT11AY.110.001339
ORF1ab/nsp3862L862FttGttT11AY.1130.000142
ORF1ab/nsp3862L862FttGttC11AY.1160.000287
ORF1ab/nsp3862L862FttGttT11AY.16.10.00047
ORF1ab/nsp3862L862FttGttT11AY.290.000016
ORF1ab/nsp3862L862FttGttT11AY.360.000148
ORF1ab/nsp3862L862FttGttT11AY.4.20.000022
ORF1ab/nsp3862L862FttGttC11AY.400.000964
ORF1ab/nsp3862L862FttGttC11AY.420.00004
ORF1ab/nsp3862L862FttGttT11AY.590.00053
ORF1ab/nsp3862L862FttGttT11AY.610.000105
ORF1ab/nsp3862L862FttGttT11AY.680.000274
ORF1ab/nsp3862L862FttGttC11AY.750.000056
ORF1ab/nsp3862L862FttGttT11AY.75.10.00018
ORF1ab/nsp3862L862FttGttT11AY.820.001357
ORF1ab/nsp3862L862FttGttT11AY.9.10.000084
ORF1ab/nsp3862L862FttGttT11AY.900.000684
ORF1ab/nsp3862L862FttGttT11AY.980.000079
ORF1ab/nsp3862L862FttGttT11AY.99.20.000092
ORF1ab/nsp3862L862FttGttC11B.1.1.100.001115
ORF1ab/nsp3862L862FttGttT11B.1.1.2160.00089
ORF1ab/nsp3862L862FttGttT11B.1.1.2840.000107
ORF1ab/nsp3862L862FttGttC11B.1.1.330.000421
ORF1ab/nsp3862L862FttGttT11B.1.1.4090.002833
ORF1ab/nsp3862L862FttGttT11B.1.1.740.00431
ORF1ab/nsp3862L862FttGttT11B.1.1040.00369
ORF1ab/nsp3862L862FttGttT11B.1.177.770.000726
ORF1ab/nsp3862L862FttGttT11B.1.2210.000071
ORF1ab/nsp3862L862FttGttT11B.1.3110.000275
ORF1ab/nsp3862L862FttGttT11B.1.36.160.001425
ORF1ab/nsp3862L862FttGttT11B.1.36.220.001208
ORF1ab/nsp3862L862FttGttT11B.1.36.290.000517
ORF1ab/nsp3862L862FttGttT11B.1.3980.002976
ORF1ab/nsp3862L862FttGttT11B.1.4220.000812
ORF1ab/nsp3862L862FttGttT11B.1.5260.000024
ORF1ab/nsp3862L862FttGttT11B.1.5820.000491
ORF1ab/nsp3862L862FttGttT11B.1.617.10.000129
ORF1ab/nsp3862L862FttGttT11P.1.140.000048
ORF1ab/nsp3862L862FttGttT11Q.10.000126
ORF1ab/nsp3862L862FttGttT11W.40.001351