CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L809del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3809L809del2L1627del2delcTAc--630.55144-5146
ORF1ab/nsp3809L809del2L1627del2delCTA--G610.1666675144-5146
ORF1ab/nsp3809L809del2L1627del2delCTAT--610.1666675144-5146
ORF1ab/nsp3809L809del2L1627del2delCTa--a610.1666675144-5146

Details of the mutation L809del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3809L809del2cTAc--36All0.000001
ORF1ab/nsp3809L809del2CTA--G16All0
ORF1ab/nsp3809L809del2CTAT--16All0
ORF1ab/nsp3809L809del2CTa--a16All0
ORF1ab/nsp3809L809del2cTAc--11AY.440.000006
ORF1ab/nsp3809L809del2CTa--a11B.10.000009
ORF1ab/nsp3809L809del2CTA--G11B.1.1.70.000001
ORF1ab/nsp3809L809del2CTAT--11B.1.20.000009
ORF1ab/nsp3809L809del2cTAc--11P.1.10.000318
ORF1ab/nsp3809L809del2cTAc--11Q.20.000613