CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L75P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp375L75PL893PnonsyncTgcCg59550.9322032942-2944
ORF1ab/nsp375L75PL893PnonsyncTGcCA5930.05084752942-2944
ORF1ab/nsp375L75PL893PnonsyncTGcCT5910.01694922942-2944

Details of the mutation L75P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp375L75PcTgcCg5559All0.000011
ORF1ab/nsp375L75PcTGcCA359All0.000001
ORF1ab/nsp375L75PcTGcCT159All0
ORF1ab/nsp375L75PcTgcCg1616B.1.1.70.000014
ORF1ab/nsp375L75PcTgcCg66AY.250.000036
ORF1ab/nsp375L75PcTgcCg44B.1.438.10.000429
ORF1ab/nsp375L75PcTgcCg23AY.430.000009
ORF1ab/nsp375L75PcTGcCA13AY.430.000004
ORF1ab/nsp375L75PcTgcCg33B.1.617.20.000011
ORF1ab/nsp375L75PcTGcCT120.055556
ORF1ab/nsp375L75PcTgcCg120.055556
ORF1ab/nsp375L75PcTgcCg22AY.290.000032
ORF1ab/nsp375L75PcTgcCg22AY.440.000012
ORF1ab/nsp375L75PcTGcCA12AY.590.00053
ORF1ab/nsp375L75PcTgcCg12AY.590.00053
ORF1ab/nsp375L75PcTgcCg22B.1.4290.000047
ORF1ab/nsp375L75PcTgcCg22P.1.100.000539
ORF1ab/nsp375L75PcTgcCg11AY.1020.000027
ORF1ab/nsp375L75PcTgcCg11AY.270.000065
ORF1ab/nsp375L75PcTgcCg11AY.30.00001
ORF1ab/nsp375L75PcTgcCg11AY.300.000396
ORF1ab/nsp375L75PcTgcCg11AY.370.000316
ORF1ab/nsp375L75PcTgcCg11AY.40.000002
ORF1ab/nsp375L75PcTGcCA11AY.70.000196
ORF1ab/nsp375L75PcTgcCg11AY.91.10.004065
ORF1ab/nsp375L75PcTgcCg11B0.000128
ORF1ab/nsp375L75PcTgcCg11B.10.000009
ORF1ab/nsp375L75PcTgcCg11B.1.177.440.000519
ORF1ab/nsp375L75PcTgcCg11B.1.20.000009
ORF1ab/nsp375L75PcTgcCg11B.1.2430.00007
ORF1ab/nsp375L75PcTgcCg11B.1.5260.000024
ORF1ab/nsp375L75PcTgcCg11B.1.6210.000089