CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L75L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp375L75LL893LsynctGctA20724171260.8263852942-2944
ORF1ab/nsp375L75LL893LsynCtgTtg2072433450.1614072942-2944
ORF1ab/nsp375L75LL893LsynctGctT207242460.01187032942-2944
ORF1ab/nsp375L75LL893LsynctGctC2072450.0002412662942-2944
ORF1ab/nsp375L75LL893LsynCtGTtA2072420.00009650652942-2944

Details of the mutation L75L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp375L75LctGctA1712620724All0.003276
ORF1ab/nsp375L75LCtgTtg334520724All0.00064
ORF1ab/nsp375L75LctGctT24620724All0.000047
ORF1ab/nsp375L75LctGctC520724All0.000001
ORF1ab/nsp375L75LCtGTtA220724All0
ORF1ab/nsp375L75LctGctA88348834AY.7.10.995605
ORF1ab/nsp375L75LctGctA50695074AY.70.993532
ORF1ab/nsp375L75LctGctT55074AY.70.00098
ORF1ab/nsp375L75LctGctA17691769AY.7.20.989374
ORF1ab/nsp375L75LCtgTtg13141318AY.200.051069
ORF1ab/nsp375L75LctGctA31318AY.200.000117
ORF1ab/nsp375L75LctGctC11318AY.200.000039
ORF1ab/nsp375L75LctGctA475904B.1.1.70.000425
ORF1ab/nsp375L75LCtgTtg397904B.1.1.70.000355
ORF1ab/nsp375L75LctGctT32904B.1.1.70.000029
ORF1ab/nsp375L75LCtgTtg748748B.1.6230.401288
ORF1ab/nsp375L75LCtgTtg217226AY.1030.001347
ORF1ab/nsp375L75LctGctA8226AY.1030.00005
ORF1ab/nsp375L75LctGctT1226AY.1030.000006
ORF1ab/nsp375L75LCtgTtg195195A.61
ORF1ab/nsp375L75LctGctA99154B.1.617.20.000373
ORF1ab/nsp375L75LCtgTtg50154B.1.617.20.000188
ORF1ab/nsp375L75LctGctT5154B.1.617.20.000019
ORF1ab/nsp375L75LctGctA137146AY.420.005512
ORF1ab/nsp375L75LCtgTtg9146AY.420.000362
ORF1ab/nsp375L75LctGctA84115AY.40.000131
ORF1ab/nsp375L75LCtgTtg21115AY.40.000033
ORF1ab/nsp375L75LctGctT10115AY.40.000016
ORF1ab/nsp375L75LCtgTtg7395P.10.00115
ORF1ab/nsp375L75LctGctA1495P.10.000221
ORF1ab/nsp375L75LctGctT895P.10.000126
ORF1ab/nsp375L75LctGctA7181AY.360.010523
ORF1ab/nsp375L75LCtgTtg1081AY.360.001482
ORF1ab/nsp375L75LctGctT7474AY.240.031897
ORF1ab/nsp375L75LctGctA7072B.1.5260.001645
ORF1ab/nsp375L75LCtgTtg272B.1.5260.000047
ORF1ab/nsp375L75LctGctA2864AY.430.000124
ORF1ab/nsp375L75LctGctT2664AY.430.000115
ORF1ab/nsp375L75LCtgTtg1064AY.430.000044
ORF1ab/nsp375L75LCtgTtg3243B.10.000293
ORF1ab/nsp375L75LctGctA843B.10.000073
ORF1ab/nsp375L75LctGctT343B.10.000027
ORF1ab/nsp375L75LctGctA3839AY.60.001563
ORF1ab/nsp375L75LCtgTtg139AY.60.000041
ORF1ab/nsp375L75LCtgTtg1736B.1.20.00015
ORF1ab/nsp375L75LctGctA1736B.1.20.00015
ORF1ab/nsp375L75LctGctC136B.1.20.000009
ORF1ab/nsp375L75LctGctT136B.1.20.000009
ORF1ab/nsp375L75LctGctA2434AY.440.000146
ORF1ab/nsp375L75LCtgTtg934AY.440.000055
ORF1ab/nsp375L75LctGctT134AY.440.000006
ORF1ab/nsp375L75LctGctA2933B.1.2210.00206
ORF1ab/nsp375L75LCtgTtg433B.1.2210.000284
ORF1ab/nsp375L75LctGctA2729B.1.3510.000803
ORF1ab/nsp375L75LCtgTtg229B.1.3510.000059
ORF1ab/nsp375L75LCtgTtg1428AY.30.000139
ORF1ab/nsp375L75LctGctA1128AY.30.000109
ORF1ab/nsp375L75LctGctT328AY.30.00003
ORF1ab/nsp375L75LCtgTtg1220B.1.1770.000158
ORF1ab/nsp375L75LctGctA620B.1.1770.000079
ORF1ab/nsp375L75LctGctC220B.1.1770.000026
ORF1ab/nsp375L75LctGctT1818B.1.3200.022416
ORF1ab/nsp375L75LctGctA1717AY.110.022758
ORF1ab/nsp375L75LctGctA1317AY.1210.001759
ORF1ab/nsp375L75LctGctT317AY.1210.000406
ORF1ab/nsp375L75LCtGTtA117AY.1210.000135
ORF1ab/nsp375L75LCtgTtg1616B.1.3240.025682
ORF1ab/nsp375L75LctGctT816B.1.4290.000188
ORF1ab/nsp375L75LctGctA516B.1.4290.000118
ORF1ab/nsp375L75LCtgTtg316B.1.4290.000071
ORF1ab/nsp375L75LctGctA1315AY.50.000268
ORF1ab/nsp375L75LCtgTtg215AY.50.000041
ORF1ab/nsp375L75LctGctA914AY.250.000054
ORF1ab/nsp375L75LCtgTtg514AY.250.00003
ORF1ab/nsp375L75LctGctA1414B.1.6370.001023
ORF1ab/nsp375L75LctGctA1313AY.1130.001851
ORF1ab/nsp375L75LctGctA1212AY.880.01061
ORF1ab/nsp375L75LctGctA1010AY.1060.003349
ORF1ab/nsp375L75LctGctA610AY.1110.001099
ORF1ab/nsp375L75LCtgTtg410AY.1110.000733
ORF1ab/nsp375L75LctGctA510B.1.1600.000156
ORF1ab/nsp375L75LCtgTtg410B.1.1600.000125
ORF1ab/nsp375L75LctGctT110B.1.1600.000031
ORF1ab/nsp375L75LctGctA1010B.1.30.026178
ORF1ab/nsp375L75LctGctA59AY.450.000608
ORF1ab/nsp375L75LCtgTtg49AY.450.000487
ORF1ab/nsp375L75LctGctA89AY.840.0035
ORF1ab/nsp375L75LCtgTtg19AY.840.000437
ORF1ab/nsp375L75LctGctT99B.1.3110.002471
ORF1ab/nsp375L75LctGctA78AY.290.00011
ORF1ab/nsp375L75LCtgTtg18AY.290.000016
ORF1ab/nsp375L75LCtgTtg48B.1.10.000073
ORF1ab/nsp375L75LctGctT28B.1.10.000036
ORF1ab/nsp375L75LctGctA28B.1.10.000036
ORF1ab/nsp375L75LCtgTtg68B.1.2340.000792
ORF1ab/nsp375L75LctGctA28B.1.2340.000264
ORF1ab/nsp375L75LCtgTtg67AY.1020.000159
ORF1ab/nsp375L75LctGctA17AY.1020.000027
ORF1ab/nsp375L75LctGctA57AY.390.000124
ORF1ab/nsp375L75LCtgTtg27AY.390.000049
ORF1ab/nsp375L75LctGctA67AY.750.000336
ORF1ab/nsp375L75LCtgTtg17AY.750.000056
ORF1ab/nsp375L75LctGctA47AY.980.000316
ORF1ab/nsp375L75LCtgTtg27AY.980.000158
ORF1ab/nsp375L75LctGctT17AY.980.000079
ORF1ab/nsp375L75LCtgTtg77B.1.110.30.005029
ORF1ab/nsp375L75LctGctT77B.1.4360.007202
ORF1ab/nsp375L75LCtgTtg77C.36.30.003971
ORF1ab/nsp375L75LCtgTtg57Q.80.000825
ORF1ab/nsp375L75LctGctA27Q.80.00033
ORF1ab/nsp375L75LCtgTtg46AY.46.60.000289
ORF1ab/nsp375L75LctGctA26AY.46.60.000144
ORF1ab/nsp375L75LctGctA66B.1.1.2160.005343
ORF1ab/nsp375L75LctGctA66P.1.70.001916
ORF1ab/nsp375L75LctGctT350.166667
ORF1ab/nsp375L75LctGctA250.111111
ORF1ab/nsp375L75LCtgTtg35AY.1000.000138
ORF1ab/nsp375L75LctGctA25AY.1000.000092
ORF1ab/nsp375L75LCtgTtg35AY.1170.000254
ORF1ab/nsp375L75LctGctA25AY.1170.000169
ORF1ab/nsp375L75LctGctA45AY.230.000279
ORF1ab/nsp375L75LCtgTtg15AY.230.00007
ORF1ab/nsp375L75LCtgTtg35AY.330.0002
ORF1ab/nsp375L75LctGctT15AY.330.000067
ORF1ab/nsp375L75LctGctA15AY.330.000067
ORF1ab/nsp375L75LctGctA55AY.4.30.004209
ORF1ab/nsp375L75LCtgTtg45AY.9.20.000147
ORF1ab/nsp375L75LctGctT15AY.9.20.000037
ORF1ab/nsp375L75LCtgTtg35B.1.1.2140.000166
ORF1ab/nsp375L75LctGctA15B.1.1.2140.000055
ORF1ab/nsp375L75LctGctT15B.1.1.2140.000055
ORF1ab/nsp375L75LCtgTtg55B.1.177.750.005203
ORF1ab/nsp375L75LCtgTtg55B.1.2580.000333
ORF1ab/nsp375L75LCtgTtg55P.1.140.000239
ORF1ab/nsp375L75LctGctA44AY.1180.000251
ORF1ab/nsp375L75LCtgTtg44AY.220.008368
ORF1ab/nsp375L75LCtgTtg34AY.260.000085
ORF1ab/nsp375L75LctGctA14AY.260.000028
ORF1ab/nsp375L75LctGctT44AY.340.000388
ORF1ab/nsp375L75LctGctA34AY.460.000312
ORF1ab/nsp375L75LCtgTtg14AY.460.000104
ORF1ab/nsp375L75LctGctA44AY.5.30.00135
ORF1ab/nsp375L75LctGctA44AY.580.00363
ORF1ab/nsp375L75LctGctA24AY.640.00119
ORF1ab/nsp375L75LCtgTtg24AY.640.00119
ORF1ab/nsp375L75LCtgTtg44B.1.564.10.006309
ORF1ab/nsp375L75LctGctA44B.1.5750.001214
ORF1ab/nsp375L75LctGctA24B.1.6210.000177
ORF1ab/nsp375L75LCtgTtg14B.1.6210.000089
ORF1ab/nsp375L75LctGctT14B.1.6210.000089
ORF1ab/nsp375L75LCtgTtg34C.360.002732
ORF1ab/nsp375L75LctGctA14C.360.000911
ORF1ab/nsp375L75LctGctT34C.370.000348
ORF1ab/nsp375L75LctGctA14C.370.000116
ORF1ab/nsp375L75LCtgTtg34D.20.000225
ORF1ab/nsp375L75LctGctT14D.20.000075
ORF1ab/nsp375L75LCtgTtg44P.1.10.001271
ORF1ab/nsp375L75LctGctT23AY.1190.000071
ORF1ab/nsp375L75LctGctA13AY.1190.000035
ORF1ab/nsp375L75LctGctA23AY.16.10.00094
ORF1ab/nsp375L75LCtgTtg13AY.16.10.00047
ORF1ab/nsp375L75LctGctA23AY.470.000062
ORF1ab/nsp375L75LCtgTtg13AY.470.000031
ORF1ab/nsp375L75LctGctA13AY.590.00053
ORF1ab/nsp375L75LCtGTtA13AY.590.00053
ORF1ab/nsp375L75LCtgTtg13AY.590.00053
ORF1ab/nsp375L75LCtgTtg33B.1.1.2800.009259
ORF1ab/nsp375L75LctGctA33B.1.1.4340.001046
ORF1ab/nsp375L75LCtgTtg33B.1.1.5190.000119
ORF1ab/nsp375L75LCtgTtg33B.1.177.440.001557
ORF1ab/nsp375L75LctGctA23B.1.2430.000139
ORF1ab/nsp375L75LctGctT13B.1.2430.00007
ORF1ab/nsp375L75LCtgTtg33B.1.3670.002377
ORF1ab/nsp375L75LctGctA33B.1.4990.003151
ORF1ab/nsp375L75LctGctA33B.300.044118
ORF1ab/nsp375L75LctGctA33P.1.170.000485
ORF1ab/nsp375L75LCtgTtg33Q.10.000379
ORF1ab/nsp375L75LctGctT33R.10.00027
ORF1ab/nsp375L75LCtgTtg22A0.000774
ORF1ab/nsp375L75LctGctA22A.250.036364
ORF1ab/nsp375L75LctGctA22AY.120.000632
ORF1ab/nsp375L75LctGctA22AY.3.10.000171
ORF1ab/nsp375L75LctGctA22AY.320.001065
ORF1ab/nsp375L75LctGctA22AY.380.000999
ORF1ab/nsp375L75LctGctA12AY.4.20.000022
ORF1ab/nsp375L75LctGctT12AY.4.20.000022
ORF1ab/nsp375L75LctGctA22AY.480.00093
ORF1ab/nsp375L75LctGctA22AY.490.00639
ORF1ab/nsp375L75LctGctA22AY.510.001818
ORF1ab/nsp375L75LctGctA12AY.550.000917
ORF1ab/nsp375L75LCtgTtg12AY.550.000917
ORF1ab/nsp375L75LctGctA22AY.560.00321
ORF1ab/nsp375L75LCtgTtg12AY.670.000464
ORF1ab/nsp375L75LctGctA12AY.670.000464
ORF1ab/nsp375L75LctGctT12AY.910.00073
ORF1ab/nsp375L75LCtgTtg12AY.910.00073
ORF1ab/nsp375L75LctGctA22AY.920.000575
ORF1ab/nsp375L75LctGctA22AY.99.10.003106
ORF1ab/nsp375L75LCtgTtg22B.1.1.3510.005587
ORF1ab/nsp375L75LctGctA12B.1.1.3780.007299
ORF1ab/nsp375L75LCtgTtg12B.1.1.3780.007299
ORF1ab/nsp375L75LCtgTtg22B.1.2410.001623
ORF1ab/nsp375L75LCtgTtg22B.1.258.210.015504
ORF1ab/nsp375L75LCtgTtg22B.1.36.170.000988
ORF1ab/nsp375L75LCtgTtg22B.1.36.180.00084
ORF1ab/nsp375L75LCtgTtg22B.1.5250.000226
ORF1ab/nsp375L75LCtgTtg22B.1.5740.004301
ORF1ab/nsp375L75LCtgTtg11A.20.000662
ORF1ab/nsp375L75LctGctA11A.2.50.000499
ORF1ab/nsp375L75LCtgTtg11A.23.10.000704
ORF1ab/nsp375L75LCtgTtg11AY.1040.001984
ORF1ab/nsp375L75LctGctA11AY.1100.000113
ORF1ab/nsp375L75LCtgTtg11AY.1160.000287
ORF1ab/nsp375L75LctGctT11AY.1200.000037
ORF1ab/nsp375L75LCtgTtg11AY.120.10.000321
ORF1ab/nsp375L75LctGctA11AY.140.000088
ORF1ab/nsp375L75LctGctA11AY.160.00038
ORF1ab/nsp375L75LctGctA11AY.210.001898
ORF1ab/nsp375L75LCtgTtg11AY.300.000396
ORF1ab/nsp375L75LctGctA11AY.400.000964
ORF1ab/nsp375L75LCtgTtg11AY.410.000294
ORF1ab/nsp375L75LctGctA11AY.46.10.001027
ORF1ab/nsp375L75LctGctA11AY.540.000095
ORF1ab/nsp375L75LctGctA11AY.690.000187
ORF1ab/nsp375L75LctGctA11AY.730.000665
ORF1ab/nsp375L75LctGctT11AY.740.000116
ORF1ab/nsp375L75LctGctA11AY.75.10.00018
ORF1ab/nsp375L75LCtgTtg11AY.820.001357
ORF1ab/nsp375L75LctGctA11AY.860.00083
ORF1ab/nsp375L75LCtgTtg11AY.9.10.000084
ORF1ab/nsp375L75LctGctA11AY.900.000684
ORF1ab/nsp375L75LctGctA11AY.950.000761
ORF1ab/nsp375L75LctGctA11AY.98.10.000048
ORF1ab/nsp375L75LctGctA11AY.990.001049
ORF1ab/nsp375L75LctGctA11B0.000128
ORF1ab/nsp375L75LctGctA11B.1.1.1760.000439
ORF1ab/nsp375L75LctGctA11B.1.1.1810.004545
ORF1ab/nsp375L75LctGctT11B.1.1.2220.000204
ORF1ab/nsp375L75LCtgTtg11B.1.1.280.000311
ORF1ab/nsp375L75LCtgTtg11B.1.1.2860.002899
ORF1ab/nsp375L75LctGctA11B.1.1.2880.001916
ORF1ab/nsp375L75LctGctA11B.1.1.3040.002809
ORF1ab/nsp375L75LctGctA11B.1.1.3260.001761
ORF1ab/nsp375L75LctGctA11B.1.1.3740.002375
ORF1ab/nsp375L75LCtgTtg11B.1.1.700.000341
ORF1ab/nsp375L75LctGctA11B.1.160.280.002924
ORF1ab/nsp375L75LctGctA11B.1.177.20.004545
ORF1ab/nsp375L75LCtgTtg11B.1.177.580.001332
ORF1ab/nsp375L75LCtgTtg11B.1.177.70.000165
ORF1ab/nsp375L75LCtgTtg11B.1.177.730.000566
ORF1ab/nsp375L75LctGctA11B.1.177.770.000726
ORF1ab/nsp375L75LCtgTtg11B.1.177.860.000183
ORF1ab/nsp375L75LCtgTtg11B.1.177.870.000728
ORF1ab/nsp375L75LctGctA11B.1.2060.000816
ORF1ab/nsp375L75LCtgTtg11B.1.2100.002132
ORF1ab/nsp375L75LCtgTtg11B.1.2140.003663
ORF1ab/nsp375L75LCtgTtg11B.1.2390.001221
ORF1ab/nsp375L75LCtgTtg11B.1.258.60.019608
ORF1ab/nsp375L75LctGctT11B.1.3260.007576
ORF1ab/nsp375L75LCtgTtg11B.1.3460.001311
ORF1ab/nsp375L75LctGctC11B.1.360.000146
ORF1ab/nsp375L75LctGctA11B.1.3690.000285
ORF1ab/nsp375L75LCtgTtg11B.1.3890.001002
ORF1ab/nsp375L75LCtgTtg11B.1.4000.000429
ORF1ab/nsp375L75LctGctA11B.1.4160.001269
ORF1ab/nsp375L75LCtgTtg11B.1.440.008333
ORF1ab/nsp375L75LCtgTtg11B.1.4530.003236
ORF1ab/nsp375L75LctGctT11B.1.5820.000491
ORF1ab/nsp375L75LCtgTtg11B.1.5960.000087
ORF1ab/nsp375L75LctGctA11B.1.596.10.009346
ORF1ab/nsp375L75LctGctA11B.1.6340.003425
ORF1ab/nsp375L75LctGctA11N.50.001767
ORF1ab/nsp375L75LCtgTtg11P.1.150.000232
ORF1ab/nsp375L75LCtgTtg11P.1.20.001156
ORF1ab/nsp375L75LctGctA11P.1.80.004785