CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L689R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3689L689RL1507RnonsyncTtcGt430.754784-4786
ORF1ab/nsp3689L689RL1507RnonsyncTTcGA410.254784-4786

Details of the mutation L689R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3689L689RcTtcGt34All0.000001
ORF1ab/nsp3689L689RcTTcGA14All0
ORF1ab/nsp3689L689RcTTcGA12B.10.000009
ORF1ab/nsp3689L689RcTtcGt12B.10.000009
ORF1ab/nsp3689L689RcTtcGt11B.1.1.70.000001
ORF1ab/nsp3689L689RcTtcGt11B.1.5260.000024