CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L550F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3550L550FL1368FnonsynCttTtt535314367-4369

Details of the mutation L550F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3550L550FCttTtt5353All0.00001
ORF1ab/nsp3550L550FCttTtt1111AY.340.001067
ORF1ab/nsp3550L550FCttTtt77B.1.1.70.000006
ORF1ab/nsp3550L550FCttTtt55AY.40.000008
ORF1ab/nsp3550L550FCttTtt55B.1.617.20.000019
ORF1ab/nsp3550L550FCttTtt33AY.1190.000106
ORF1ab/nsp3550L550FCttTtt33B.10.000027
ORF1ab/nsp3550L550FCttTtt33B.1.10.000054
ORF1ab/nsp3550L550FCttTtt22AY.440.000012
ORF1ab/nsp3550L550FCttTtt22B.1.1770.000026
ORF1ab/nsp3550L550FCttTtt22B.1.360.000292
ORF1ab/nsp3550L550FCttTtt11AY.430.000004
ORF1ab/nsp3550L550FCttTtt11AY.460.000104
ORF1ab/nsp3550L550FCttTtt11AY.470.000031
ORF1ab/nsp3550L550FCttTtt11B.1.1.10.000327
ORF1ab/nsp3550L550FCttTtt11B.1.177.160.000664
ORF1ab/nsp3550L550FCttTtt11B.1.177.210.000076
ORF1ab/nsp3550L550FCttTtt11B.1.20.000009
ORF1ab/nsp3550L550FCttTtt11B.1.2340.000132
ORF1ab/nsp3550L550FCttTtt11B.1.5260.000024
ORF1ab/nsp3550L550FCttTtt11B.1.5960.000087