CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L431L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3431L431LL1249LsynctCctT765276030.9935964010-4012
ORF1ab/nsp3431L431LL1249LsynctCctA7652440.005750134010-4012
ORF1ab/nsp3431L431LL1249LsynctCctG765230.0003920544010-4012
ORF1ab/nsp3431L431LL1249LsynCtCTtA765210.0001306854010-4012
ORF1ab/nsp3431L431LL1249LsynCtCTtG765210.0001306854010-4012

Details of the mutation L431L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3431L431LctCctT76037652All0.001454
ORF1ab/nsp3431L431LctCctA447652All0.000008
ORF1ab/nsp3431L431LctCctG37652All0.000001
ORF1ab/nsp3431L431LCtCTtA17652All0
ORF1ab/nsp3431L431LCtCTtG17652All0
ORF1ab/nsp3431L431LctCctT36123612AY.30.035926
ORF1ab/nsp3431L431LctCctT12661278B.1.1.70.001133
ORF1ab/nsp3431L431LctCctA121278B.1.1.70.000011
ORF1ab/nsp3431L431LctCctT292292B.1.177.550.680653
ORF1ab/nsp3431L431LctCctT285291AY.40.000444
ORF1ab/nsp3431L431LctCctA6291AY.40.000009
ORF1ab/nsp3431L431LctCctT199199AY.1030.001236
ORF1ab/nsp3431L431LctCctT174174AY.4.10.128319
ORF1ab/nsp3431L431LctCctT159160C.370.018454
ORF1ab/nsp3431L431LctCctA1160C.370.000116
ORF1ab/nsp3431L431LctCctT139139B.1.617.20.000523
ORF1ab/nsp3431L431LctCctT104104AY.60.004277
ORF1ab/nsp3431L431LctCctT9598B.1.20.000837
ORF1ab/nsp3431L431LctCctA398B.1.20.000026
ORF1ab/nsp3431L431LctCctT7979AY.320.042066
ORF1ab/nsp3431L431LctCctT7676AY.420.003057
ORF1ab/nsp3431L431LctCctT6970B.1.1770.000909
ORF1ab/nsp3431L431LctCctA170B.1.1770.000013
ORF1ab/nsp3431L431LctCctT5959B.1.1.5190.002343
ORF1ab/nsp3431L431LctCctT5455AY.440.000329
ORF1ab/nsp3431L431LctCctA155AY.440.000006
ORF1ab/nsp3431L431LctCctT5555B.1.5260.001293
ORF1ab/nsp3431L431LctCctT3643B.10.00033
ORF1ab/nsp3431L431LctCctA743B.10.000064
ORF1ab/nsp3431L431LctCctT3939B.1.1.3680.12037
ORF1ab/nsp3431L431LctCctT3838AY.200.001477
ORF1ab/nsp3431L431LctCctT3838AY.540.003623
ORF1ab/nsp3431L431LctCctT3535R.10.00315
ORF1ab/nsp3431L431LctCctT3132AY.430.000137
ORF1ab/nsp3431L431LctCctA132AY.430.000004
ORF1ab/nsp3431L431LctCctT3031AY.250.00018
ORF1ab/nsp3431L431LctCctA131AY.250.000006
ORF1ab/nsp3431L431LctCctT2828AY.390.000692
ORF1ab/nsp3431L431LctCctT2323B.1.110.30.016523
ORF1ab/nsp3431L431LctCctT2222AY.1020.000583
ORF1ab/nsp3431L431LctCctT2122B.1.1600.000655
ORF1ab/nsp3431L431LctCctG122B.1.1600.000031
ORF1ab/nsp3431L431LctCctT2121AY.1170.001775
ORF1ab/nsp3431L431LctCctT2121B.1.2580.001397
ORF1ab/nsp3431L431LctCctT2020B.1.4270.00101
ORF1ab/nsp3431L431LctCctT1519B.1.5250.001697
ORF1ab/nsp3431L431LctCctA419B.1.5250.000453
ORF1ab/nsp3431L431LctCctT1717AY.610.001781
ORF1ab/nsp3431L431LctCctT1515Q.30.002175
ORF1ab/nsp3431L431LctCctT1414AY.1200.000521
ORF1ab/nsp3431L431LctCctT1414AY.290.000221
ORF1ab/nsp3431L431LctCctT1414B.1.10.000254
ORF1ab/nsp3431L431LctCctT1314P.10.000205
ORF1ab/nsp3431L431LctCctG114P.10.000016
ORF1ab/nsp3431L431LctCctT1212AY.4.20.00026
ORF1ab/nsp3431L431LctCctT1212AY.920.003447
ORF1ab/nsp3431L431LctCctT1212B.1.3510.000357
ORF1ab/nsp3431L431LctCctT1212B.1.596.10.11215
ORF1ab/nsp3431L431LctCctT1111B.1.3490.007863
ORF1ab/nsp3431L431LctCctT1010B.1.258.170.00104
ORF1ab/nsp3431L431LctCctT99AY.50.000186
ORF1ab/nsp3431L431LctCctT88AY.930.002185
ORF1ab/nsp3431L431LctCctT88B.1.1.4160.00724
ORF1ab/nsp3431L431LctCctT78B.1.5960.00061
ORF1ab/nsp3431L431LctCctA18B.1.5960.000087
ORF1ab/nsp3431L431LctCctT77AY.840.003062
ORF1ab/nsp3431L431LctCctT77B.1.1.2650.022082
ORF1ab/nsp3431L431LctCctT77B.1.177.160.004651
ORF1ab/nsp3431L431LctCctT46AY.1190.000141
ORF1ab/nsp3431L431LctCctA26AY.1190.000071
ORF1ab/nsp3431L431LctCctT56AY.260.000142
ORF1ab/nsp3431L431LctCctA16AY.260.000028
ORF1ab/nsp3431L431LctCctT66AY.46.60.000433
ORF1ab/nsp3431L431LctCctT66AY.470.000187
ORF1ab/nsp3431L431LctCctT56B.1.36.290.002587
ORF1ab/nsp3431L431LctCctA16B.1.36.290.000517
ORF1ab/nsp3431L431LctCctT66B.1.6210.000531
ORF1ab/nsp3431L431LctCctT66P.1.140.000287
ORF1ab/nsp3431L431LctCctT350.166667
ORF1ab/nsp3431L431LctCctA250.111111
ORF1ab/nsp3431L431LctCctT55AY.230.000349
ORF1ab/nsp3431L431LctCctT55B.1.3890.00501
ORF1ab/nsp3431L431LctCctT55B.1.4290.000118
ORF1ab/nsp3431L431LctCctT55B.1.6180.020161
ORF1ab/nsp3431L431LctCctT55B.1.621.10.002529
ORF1ab/nsp3431L431LctCctT55C.37.10.013089
ORF1ab/nsp3431L431LctCctT44AY.1000.000184
ORF1ab/nsp3431L431LctCctT44AY.1130.00057
ORF1ab/nsp3431L431LctCctT44AY.46.40.000658
ORF1ab/nsp3431L431LctCctT44B0.000511
ORF1ab/nsp3431L431LctCctT44B.1.1.2080.04878
ORF1ab/nsp3431L431LctCctT44B.1.2410.003247
ORF1ab/nsp3431L431LctCctT44B.1.2430.000278
ORF1ab/nsp3431L431LctCctT44B.1.351.20.00121
ORF1ab/nsp3431L431LctCctT44B.1.360.000584
ORF1ab/nsp3431L431LctCctT33A.20.001985
ORF1ab/nsp3431L431LctCctT33AY.1060.001005
ORF1ab/nsp3431L431LctCctT33AY.1140.000693
ORF1ab/nsp3431L431LctCctT33AY.1180.000188
ORF1ab/nsp3431L431LctCctT33AY.170.02459
ORF1ab/nsp3431L431LctCctT33AY.690.00056
ORF1ab/nsp3431L431LctCctT33AY.7.10.000338
ORF1ab/nsp3431L431LctCctT33AY.730.001996
ORF1ab/nsp3431L431LctCctT33AY.740.000347
ORF1ab/nsp3431L431LctCctT33AY.950.002283
ORF1ab/nsp3431L431LctCctT33AY.99.20.000276
ORF1ab/nsp3431L431LctCctT33B.1.1.280.000934
ORF1ab/nsp3431L431LctCctT33B.1.1.4530.025424
ORF1ab/nsp3431L431LctCctT33B.1.177.750.003122
ORF1ab/nsp3431L431LctCctT33B.1.258.140.002941
ORF1ab/nsp3431L431LctCctT33B.1.5610.001191
ORF1ab/nsp3431L431LctCctT33P.1.150.000697
ORF1ab/nsp3431L431LctCctT22A.2.5.30.020619
ORF1ab/nsp3431L431LctCctT22AY.1040.003968
ORF1ab/nsp3431L431LctCctT22AY.1100.000225
ORF1ab/nsp3431L431LctCctT22AY.1110.000366
ORF1ab/nsp3431L431LctCctT22AY.1160.000574
ORF1ab/nsp3431L431LctCctT22AY.270.000129
ORF1ab/nsp3431L431LctCctT22AY.340.000194
ORF1ab/nsp3431L431LctCctT22AY.370.000632
ORF1ab/nsp3431L431LctCctT22AY.39.10.000079
ORF1ab/nsp3431L431LctCctT22AY.630.000774
ORF1ab/nsp3431L431LctCctT22AY.680.000547
ORF1ab/nsp3431L431LctCctT22AY.9.20.000073
ORF1ab/nsp3431L431LctCctT22AY.980.000158
ORF1ab/nsp3431L431LCtCTtG12B.1.1.330.000421
ORF1ab/nsp3431L431LCtCTtA12B.1.1.330.000421
ORF1ab/nsp3431L431LctCctT22B.1.177.210.000153
ORF1ab/nsp3431L431LctCctT22B.1.177.570.000562
ORF1ab/nsp3431L431LctCctT22B.1.36.160.002849
ORF1ab/nsp3431L431LctCctT22B.1.3750.001639
ORF1ab/nsp3431L431LctCctT22B.1.4160.002538
ORF1ab/nsp3431L431LctCctT22B.1.4970.00063
ORF1ab/nsp3431L431LctCctT22B.1.5760.001813
ORF1ab/nsp3431L431LctCctT22B.1.5770.001375
ORF1ab/nsp3431L431LctCctT22B.1.5800.00813
ORF1ab/nsp3431L431LctCctT22B.1.617.10.000258
ORF1ab/nsp3431L431LctCctT22P.1.70.000639
ORF1ab/nsp3431L431LctCctT22Z.10.00578
ORF1ab/nsp3431L431LctCctT11A.23.10.000704
ORF1ab/nsp3431L431LctCctT11A.270.001656
ORF1ab/nsp3431L431LctCctT11A.290.005319
ORF1ab/nsp3431L431LctCctT11AU.30.00211
ORF1ab/nsp3431L431LctCctT11AY.1050.000643
ORF1ab/nsp3431L431LctCctT11AY.120.2.10.000498
ORF1ab/nsp3431L431LctCctT11AY.360.000148
ORF1ab/nsp3431L431LctCctT11AY.4.30.000842
ORF1ab/nsp3431L431LctCctT11AY.450.000122
ORF1ab/nsp3431L431LctCctT11AY.460.000104
ORF1ab/nsp3431L431LctCctT11AY.5.30.000337
ORF1ab/nsp3431L431LctCctT11AY.530.000288
ORF1ab/nsp3431L431LctCctT11AY.550.000917
ORF1ab/nsp3431L431LctCctT11AY.590.00053
ORF1ab/nsp3431L431LctCctT11AY.620.000436
ORF1ab/nsp3431L431LctCctT11AY.660.00107
ORF1ab/nsp3431L431LctCctT11AY.7.20.000559
ORF1ab/nsp3431L431LctCctT11AY.770.001127
ORF1ab/nsp3431L431LctCctT11AY.90.000068
ORF1ab/nsp3431L431LctCctT11AY.9.10.000084
ORF1ab/nsp3431L431LctCctT11B.1.1.100.001115
ORF1ab/nsp3431L431LctCctT11B.1.1.2070.001182
ORF1ab/nsp3431L431LctCctT11B.1.1.2140.000055
ORF1ab/nsp3431L431LctCctT11B.1.1.2840.000107
ORF1ab/nsp3431L431LctCctT11B.1.1.2850.006536
ORF1ab/nsp3431L431LctCctT11B.1.1.3180.000302
ORF1ab/nsp3431L431LctCctT11B.1.1.3540.004386
ORF1ab/nsp3431L431LctCctT11B.1.1.3690.000446
ORF1ab/nsp3431L431LctCctT11B.1.1.3850.004464
ORF1ab/nsp3431L431LctCctT11B.1.1.3970.002252
ORF1ab/nsp3431L431LctCctT11B.1.177.870.000728
ORF1ab/nsp3431L431LctCctG11B.1.2210.000071
ORF1ab/nsp3431L431LctCctT11B.1.221.30.000833
ORF1ab/nsp3431L431LctCctT11B.1.3110.000275
ORF1ab/nsp3431L431LctCctT11B.1.36.240.006173
ORF1ab/nsp3431L431LctCctT11B.1.36.270.000763
ORF1ab/nsp3431L431LctCctT11B.1.3690.000285
ORF1ab/nsp3431L431LctCctT11B.1.3930.028571
ORF1ab/nsp3431L431LctCctT11B.1.4110.003704
ORF1ab/nsp3431L431LctCctT11B.1.4560.003268
ORF1ab/nsp3431L431LctCctT11B.1.4680.005714
ORF1ab/nsp3431L431LctCctT11B.1.4700.001404
ORF1ab/nsp3431L431LctCctT11B.1.4930.025641
ORF1ab/nsp3431L431LctCctT11B.1.5790.011236
ORF1ab/nsp3431L431LctCctT11B.1.6360.006711
ORF1ab/nsp3431L431LctCctT11B.30.000831
ORF1ab/nsp3431L431LctCctT11B.400.000364
ORF1ab/nsp3431L431LctCctT11C.390.018868
ORF1ab/nsp3431L431LctCctT11D.20.000075
ORF1ab/nsp3431L431LctCctT11N.50.001767
ORF1ab/nsp3431L431LctCctT11P.1.170.000162
ORF1ab/nsp3431L431LctCctT11Q.10.000126