CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L312F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3312L312FL1130FnonsynCttTtt5873587313653-3655

Details of the mutation L312F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3312L312FCttTtt58735873All0.001123
ORF1ab/nsp3312L312FCttTtt867867B.1.1.70.000776
ORF1ab/nsp3312L312FCttTtt853853AY.390.021079
ORF1ab/nsp3312L312FCttTtt472472AY.40.000735
ORF1ab/nsp3312L312FCttTtt359359AY.1030.002229
ORF1ab/nsp3312L312FCttTtt249249B.10.002281
ORF1ab/nsp3312L312FCttTtt183183AY.440.001114
ORF1ab/nsp3312L312FCttTtt172172B.1.438.10.018449
ORF1ab/nsp3312L312FCttTtt169169P.1.170.027337
ORF1ab/nsp3312L312FCttTtt166166AY.420.006678
ORF1ab/nsp3312L312FCttTtt158158AY.460.016445
ORF1ab/nsp3312L312FCttTtt141141B.1.617.20.000531
ORF1ab/nsp3312L312FCttTtt125125AY.430.000554
ORF1ab/nsp3312L312FCttTtt122122B.1.20.001074
ORF1ab/nsp3312L312FCttTtt109109B.1.10.001977
ORF1ab/nsp3312L312FCttTtt9898AY.20.0349
ORF1ab/nsp3312L312FCttTtt9292B.1.1600.002869
ORF1ab/nsp3312L312FCttTtt8383P.10.001308
ORF1ab/nsp3312L312FCttTtt8080B.1.4290.001882
ORF1ab/nsp3312L312FCttTtt7474AY.270.004789
ORF1ab/nsp3312L312FCttTtt7474B.1.3110.020319
ORF1ab/nsp3312L312FCttTtt6767AY.30.000666
ORF1ab/nsp3312L312FCttTtt6767B.1.1770.000882
ORF1ab/nsp3312L312FCttTtt6666AY.250.000397
ORF1ab/nsp3312L312FCttTtt5858B.1.2340.007653
ORF1ab/nsp3312L312FCttTtt3939C.36.30.022121
ORF1ab/nsp3312L312FCttTtt3636AY.140.003168
ORF1ab/nsp3312L312FCttTtt3535B.1.360.005107
ORF1ab/nsp3312L312FCttTtt3131AY.46.60.002238
ORF1ab/nsp3312L312FCttTtt2929B.1.2430.002018
ORF1ab/nsp3312L312FCttTtt2424B.1.1.1070.774194
ORF1ab/nsp3312L312FCttTtt2424C.370.002786
ORF1ab/nsp3312L312FCttTtt2222B.1.3510.000654
ORF1ab/nsp3312L312FCttTtt1818AY.340.001745
ORF1ab/nsp3312L312FCttTtt1717AY.1020.000451
ORF1ab/nsp3312L312FCttTtt1616B.1.1.5190.000635
ORF1ab/nsp3312L312FCttTtt1616B.1.2210.001137
ORF1ab/nsp3312L312FCttTtt1515AY.200.000583
ORF1ab/nsp3312L312FCttTtt1515B.1.1.4240.681818
ORF1ab/nsp3312L312FCttTtt1515B.1.3690.004278
ORF1ab/nsp3312L312FCttTtt1515B.1.5260.000353
ORF1ab/nsp3312L312FCttTtt1414AE.80.006846
ORF1ab/nsp3312L312FCttTtt1414AY.1190.000494
ORF1ab/nsp3312L312FCttTtt1414AY.260.000396
ORF1ab/nsp3312L312FCttTtt1414AY.46.10.014374
ORF1ab/nsp3312L312FCttTtt1414B.1.2580.000932
ORF1ab/nsp3312L312FCttTtt1313R.10.00117
ORF1ab/nsp3312L312FCttTtt1212B.1.6210.001062
ORF1ab/nsp3312L312FCttTtt1111B.1.1.500.007468
ORF1ab/nsp3312L312FCttTtt1111B.1.4160.013959
ORF1ab/nsp3312L312FCttTtt1111B.1.5950.002871
ORF1ab/nsp3312L312FCttTtt1010AY.1050.006431
ORF1ab/nsp3312L312FCttTtt1010AY.610.001048
ORF1ab/nsp3312L312FCttTtt99AY.46.40.001481
ORF1ab/nsp3312L312FCttTtt99P.20.00168
ORF1ab/nsp3312L312FCttTtt88AY.290.000126
ORF1ab/nsp3312L312FCttTtt88AY.750.000448
ORF1ab/nsp3312L312FCttTtt88B.1.177.620.009535
ORF1ab/nsp3312L312FCttTtt88B.1.36.90.025723
ORF1ab/nsp3312L312FCttTtt88P.1.70.002554
ORF1ab/nsp3312L312FCttTtt77AY.470.000218
ORF1ab/nsp3312L312FCttTtt77AY.60.000288
ORF1ab/nsp3312L312FCttTtt77AY.880.006189
ORF1ab/nsp3312L312FCttTtt77AY.98.10.000339
ORF1ab/nsp3312L312FCttTtt77B.1.177.860.001284
ORF1ab/nsp3312L312FCttTtt77B.1.2400.001509
ORF1ab/nsp3312L312FCttTtt77B.1.466.20.002739
ORF1ab/nsp3312L312FCttTtt77B.1.5960.00061
ORF1ab/nsp3312L312FCttTtt66A.2.5.10.028846
ORF1ab/nsp3312L312FCttTtt66AY.4.20.00013
ORF1ab/nsp3312L312FCttTtt66AY.99.20.000553
ORF1ab/nsp3312L312FCttTtt66B.1.214.20.003597
ORF1ab/nsp3312L312FCttTtt66B.1.30.015707
ORF1ab/nsp3312L312FCttTtt55A.190.04717
ORF1ab/nsp3312L312FCttTtt55AY.640.002976
ORF1ab/nsp3312L312FCttTtt55AY.810.00996
ORF1ab/nsp3312L312FCttTtt55B.1.1.2140.000277
ORF1ab/nsp3312L312FCttTtt55B.1.1.3060.002192
ORF1ab/nsp3312L312FCttTtt55B.1.2410.004058
ORF1ab/nsp3312L312FCttTtt55B.1.4700.007022
ORF1ab/nsp3312L312FCttTtt55D.20.000375
ORF1ab/nsp3312L312FCttTtt44AY.450.000487
ORF1ab/nsp3312L312FCttTtt44AY.50.000083
ORF1ab/nsp3312L312FCttTtt44AY.920.001149
ORF1ab/nsp3312L312FCttTtt44B.1.1.10.001307
ORF1ab/nsp3312L312FCttTtt44B.1.1.3110.001433
ORF1ab/nsp3312L312FCttTtt44B.1.1.5250.021858
ORF1ab/nsp3312L312FCttTtt44B.1.3490.002859
ORF1ab/nsp3312L312FCttTtt44B.1.5250.000453
ORF1ab/nsp3312L312FCttTtt44B.1.6120.01061
ORF1ab/nsp3312L312FCttTtt44B.1.617.30.01194
ORF1ab/nsp3312L312FCttTtt44B.1.6370.000292
ORF1ab/nsp3312L312FCttTtt44P.1.140.000191
ORF1ab/nsp3312L312FCttTtt44Q.30.00058
ORF1ab/nsp3312L312FCttTtt33A.2.5.20.004717
ORF1ab/nsp3312L312FCttTtt33AD.20.000657
ORF1ab/nsp3312L312FCttTtt33AP.10.004505
ORF1ab/nsp3312L312FCttTtt33AY.1070.001398
ORF1ab/nsp3312L312FCttTtt33AY.1180.000188
ORF1ab/nsp3312L312FCttTtt33AY.120.10.000963
ORF1ab/nsp3312L312FCttTtt33AY.1210.000406
ORF1ab/nsp3312L312FCttTtt33AY.360.000445
ORF1ab/nsp3312L312FCttTtt33AY.480.001395
ORF1ab/nsp3312L312FCttTtt33B.1.1.2180.023077
ORF1ab/nsp3312L312FCttTtt33B.1.1620.015075
ORF1ab/nsp3312L312FCttTtt33B.1.36.290.001552
ORF1ab/nsp3312L312FCttTtt33B.1.36.370.008333
ORF1ab/nsp3312L312FCttTtt33B.1.4000.001287
ORF1ab/nsp3312L312FCttTtt33B.1.5500.041096
ORF1ab/nsp3312L312FCttTtt33B.1.617.10.000387
ORF1ab/nsp3312L312FCttTtt22A.20.001324
ORF1ab/nsp3312L312FCttTtt22AY.1000.000092
ORF1ab/nsp3312L312FCttTtt22AY.1130.000285
ORF1ab/nsp3312L312FCttTtt22AY.1200.000074
ORF1ab/nsp3312L312FCttTtt22AY.190.002281
ORF1ab/nsp3312L312FCttTtt22AY.230.000139
ORF1ab/nsp3312L312FCttTtt22AY.4.50.000215
ORF1ab/nsp3312L312FCttTtt22AY.46.50.000397
ORF1ab/nsp3312L312FCttTtt22AY.540.000191
ORF1ab/nsp3312L312FCttTtt22AY.620.000871
ORF1ab/nsp3312L312FCttTtt22AY.680.000547
ORF1ab/nsp3312L312FCttTtt22AY.700.000417
ORF1ab/nsp3312L312FCttTtt22AY.75.10.000361
ORF1ab/nsp3312L312FCttTtt22B0.000256
ORF1ab/nsp3312L312FCttTtt22B.1.1.1570.001826
ORF1ab/nsp3312L312FCttTtt22B.1.1.2200.003717
ORF1ab/nsp3312L312FCttTtt22B.1.1.2220.000408
ORF1ab/nsp3312L312FCttTtt22B.1.1.2320.00363
ORF1ab/nsp3312L312FCttTtt22B.1.1.280.000622
ORF1ab/nsp3312L312FCttTtt22B.1.1.3480.001592
ORF1ab/nsp3312L312FCttTtt22B.1.1260.002551
ORF1ab/nsp3312L312FCttTtt22B.1.1270.004396
ORF1ab/nsp3312L312FCttTtt22B.1.1530.037736
ORF1ab/nsp3312L312FCttTtt22B.1.160.160.001859
ORF1ab/nsp3312L312FCttTtt22B.1.177.180.00232
ORF1ab/nsp3312L312FCttTtt22B.1.177.230.006472
ORF1ab/nsp3312L312FCttTtt22B.1.177.60.001953
ORF1ab/nsp3312L312FCttTtt22B.1.177.90.002663
ORF1ab/nsp3312L312FCttTtt22B.1.2360.004107
ORF1ab/nsp3312L312FCttTtt22B.1.2370.00995
ORF1ab/nsp3312L312FCttTtt22B.1.2980.004228
ORF1ab/nsp3312L312FCttTtt22B.1.3200.002491
ORF1ab/nsp3312L312FCttTtt22B.1.36.360.001204
ORF1ab/nsp3312L312FCttTtt22B.1.3800.013245
ORF1ab/nsp3312L312FCttTtt22B.1.5170.000854
ORF1ab/nsp3312L312FCttTtt22B.1.5640.000852
ORF1ab/nsp3312L312FCttTtt22P.1.150.000465
ORF1ab/nsp3312L312FCttTtt11A.2.20.001689
ORF1ab/nsp3312L312FCttTtt11A.230.010526
ORF1ab/nsp3312L312FCttTtt11AD.2.10.045455
ORF1ab/nsp3312L312FCttTtt11AE.40.043478
ORF1ab/nsp3312L312FCttTtt11AY.1060.000335
ORF1ab/nsp3312L312FCttTtt11AY.1170.000085
ORF1ab/nsp3312L312FCttTtt11AY.120.2.10.000498
ORF1ab/nsp3312L312FCttTtt11AY.16.10.00047
ORF1ab/nsp3312L312FCttTtt11AY.300.000396
ORF1ab/nsp3312L312FCttTtt11AY.320.000532
ORF1ab/nsp3312L312FCttTtt11AY.330.000067
ORF1ab/nsp3312L312FCttTtt11AY.380.000499
ORF1ab/nsp3312L312FCttTtt11AY.39.10.00004
ORF1ab/nsp3312L312FCttTtt11AY.5.40.000277
ORF1ab/nsp3312L312FCttTtt11AY.710.000475
ORF1ab/nsp3312L312FCttTtt11AY.740.000116
ORF1ab/nsp3312L312FCttTtt11AY.90.000068
ORF1ab/nsp3312L312FCttTtt11AY.9.10.000084
ORF1ab/nsp3312L312FCttTtt11AY.9.20.000037
ORF1ab/nsp3312L312FCttTtt11AY.910.00073
ORF1ab/nsp3312L312FCttTtt11AY.950.000761
ORF1ab/nsp3312L312FCttTtt11AY.970.001701
ORF1ab/nsp3312L312FCttTtt11AY.980.000079
ORF1ab/nsp3312L312FCttTtt11AZ.50.003509
ORF1ab/nsp3312L312FCttTtt11B.1.1.1010.01
ORF1ab/nsp3312L312FCttTtt11B.1.1.1530.001095
ORF1ab/nsp3312L312FCttTtt11B.1.1.2070.001182
ORF1ab/nsp3312L312FCttTtt11B.1.1.2690.001353
ORF1ab/nsp3312L312FCttTtt11B.1.1.270.00565
ORF1ab/nsp3312L312FCttTtt11B.1.1.2840.000107
ORF1ab/nsp3312L312FCttTtt11B.1.1.2890.002083
ORF1ab/nsp3312L312FCttTtt11B.1.1.2940.001266
ORF1ab/nsp3312L312FCttTtt11B.1.1.3050.003861
ORF1ab/nsp3312L312FCttTtt11B.1.1.3170.000412
ORF1ab/nsp3312L312FCttTtt11B.1.1.3180.000302
ORF1ab/nsp3312L312FCttTtt11B.1.1.3260.001761
ORF1ab/nsp3312L312FCttTtt11B.1.1.3690.000446
ORF1ab/nsp3312L312FCttTtt11B.1.1.370.000193
ORF1ab/nsp3312L312FCttTtt11B.1.1.3750.011905
ORF1ab/nsp3312L312FCttTtt11B.1.1.3980.003226
ORF1ab/nsp3312L312FCttTtt11B.1.1.4130.006897
ORF1ab/nsp3312L312FCttTtt11B.1.1.4160.000905
ORF1ab/nsp3312L312FCttTtt11B.1.1.4320.001266
ORF1ab/nsp3312L312FCttTtt11B.1.1030.019231
ORF1ab/nsp3312L312FCttTtt11B.1.1190.010526
ORF1ab/nsp3312L312FCttTtt11B.1.1390.000733
ORF1ab/nsp3312L312FCttTtt11B.1.1570.002985
ORF1ab/nsp3312L312FCttTtt11B.1.160.220.006757
ORF1ab/nsp3312L312FCttTtt11B.1.177.160.000664
ORF1ab/nsp3312L312FCttTtt11B.1.177.20.004545
ORF1ab/nsp3312L312FCttTtt11B.1.177.40.000211
ORF1ab/nsp3312L312FCttTtt11B.1.177.510.004566
ORF1ab/nsp3312L312FCttTtt11B.1.177.600.000218
ORF1ab/nsp3312L312FCttTtt11B.1.177.650.000665
ORF1ab/nsp3312L312FCttTtt11B.1.177.730.000566
ORF1ab/nsp3312L312FCttTtt11B.1.177.830.001481
ORF1ab/nsp3312L312FCttTtt11B.1.1790.003759
ORF1ab/nsp3312L312FCttTtt11B.1.1890.004292
ORF1ab/nsp3312L312FCttTtt11B.1.2320.000537
ORF1ab/nsp3312L312FCttTtt11B.1.2390.001221
ORF1ab/nsp3312L312FCttTtt11B.1.2650.001271
ORF1ab/nsp3312L312FCttTtt11B.1.36.100.004785
ORF1ab/nsp3312L312FCttTtt11B.1.36.180.00042
ORF1ab/nsp3312L312FCttTtt11B.1.36.310.001751
ORF1ab/nsp3312L312FCttTtt11B.1.36.350.002604
ORF1ab/nsp3312L312FCttTtt11B.1.3960.000706
ORF1ab/nsp3312L312FCttTtt11B.1.3990.001934
ORF1ab/nsp3312L312FCttTtt11B.1.4030.003268
ORF1ab/nsp3312L312FCttTtt11B.1.4270.00005
ORF1ab/nsp3312L312FCttTtt11B.1.4280.00102
ORF1ab/nsp3312L312FCttTtt11B.1.4330.003195
ORF1ab/nsp3312L312FCttTtt11B.1.4800.002488
ORF1ab/nsp3312L312FCttTtt11B.1.4970.000315
ORF1ab/nsp3312L312FCttTtt11B.1.5510.00129
ORF1ab/nsp3312L312FCttTtt11B.1.5620.018519
ORF1ab/nsp3312L312FCttTtt11B.1.5650.00081
ORF1ab/nsp3312L312FCttTtt11B.1.5750.000303
ORF1ab/nsp3312L312FCttTtt11B.1.575.10.002439
ORF1ab/nsp3312L312FCttTtt11B.1.5760.000907
ORF1ab/nsp3312L312FCttTtt11B.1.6090.000479
ORF1ab/nsp3312L312FCttTtt11B.1.6230.000536
ORF1ab/nsp3312L312FCttTtt11B.1.6260.005714
ORF1ab/nsp3312L312FCttTtt11B.1.6270.00202
ORF1ab/nsp3312L312FCttTtt11B.1.80.001972
ORF1ab/nsp3312L312FCttTtt11B.100.008264
ORF1ab/nsp3312L312FCttTtt11B.30.000831
ORF1ab/nsp3312L312FCttTtt11B.450.003831
ORF1ab/nsp3312L312FCttTtt11C.10.002392
ORF1ab/nsp3312L312FCttTtt11C.230.005814
ORF1ab/nsp3312L312FCttTtt11N.60.007092
ORF1ab/nsp3312L312FCttTtt11P.1.10.000318
ORF1ab/nsp3312L312FCttTtt11P.1.100.000269
ORF1ab/nsp3312L312FCttTtt11P.1.160.000374
ORF1ab/nsp3312L312FCttTtt11P.1.80.004785
ORF1ab/nsp3312L312FCttTtt11Q.10.000126
ORF1ab/nsp3312L312FCttTtt11Q.70.001111