CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1791L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31791L1791LL2609LsynctCctT687466030.9605768090-8092
ORF1ab/nsp31791L1791LL2609LsynctCctA68742410.03505968090-8092
ORF1ab/nsp31791L1791LL2609LsynctCctG6874290.00421888090-8092
ORF1ab/nsp31791L1791LL2609LsynCtCTtA687410.0001454768090-8092

Details of the mutation L1791L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31791L1791LctCctT66036874All0.001263
ORF1ab/nsp31791L1791LctCctA2416874All0.000046
ORF1ab/nsp31791L1791LctCctG296874All0.000006
ORF1ab/nsp31791L1791LCtCTtA16874All0
ORF1ab/nsp31791L1791LctCctT12861310B.1.1.70.001151
ORF1ab/nsp31791L1791LctCctA171310B.1.1.70.000015
ORF1ab/nsp31791L1791LctCctG71310B.1.1.70.000006
ORF1ab/nsp31791L1791LctCctT926931AY.430.004103
ORF1ab/nsp31791L1791LctCctA5931AY.430.000022
ORF1ab/nsp31791L1791LctCctT294307AY.40.000458
ORF1ab/nsp31791L1791LctCctG11307AY.40.000017
ORF1ab/nsp31791L1791LctCctA2307AY.40.000003
ORF1ab/nsp31791L1791LctCctT294302B.1.617.20.001107
ORF1ab/nsp31791L1791LctCctA7302B.1.617.20.000026
ORF1ab/nsp31791L1791LctCctG1302B.1.617.20.000004
ORF1ab/nsp31791L1791LctCctT288288B.1.4270.014543
ORF1ab/nsp31791L1791LctCctT257264AY.1030.001596
ORF1ab/nsp31791L1791LctCctA7264AY.1030.000043
ORF1ab/nsp31791L1791LctCctT262262AH.30.996198
ORF1ab/nsp31791L1791LctCctT202205AY.440.00123
ORF1ab/nsp31791L1791LctCctA3205AY.440.000018
ORF1ab/nsp31791L1791LctCctT199200AY.30.001979
ORF1ab/nsp31791L1791LctCctA1200AY.30.00001
ORF1ab/nsp31791L1791LctCctT143145B.1.20.001259
ORF1ab/nsp31791L1791LctCctA2145B.1.20.000018
ORF1ab/nsp31791L1791LctCctT133141B.10.001218
ORF1ab/nsp31791L1791LctCctA8141B.10.000073
ORF1ab/nsp31791L1791LctCctT138138AY.50.00285
ORF1ab/nsp31791L1791LctCctT136136B.1.177.60.132812
ORF1ab/nsp31791L1791LctCctT120120AY.4.50.012899
ORF1ab/nsp31791L1791LctCctT112118P.10.001764
ORF1ab/nsp31791L1791LctCctA5118P.10.000079
ORF1ab/nsp31791L1791LctCctG1118P.10.000016
ORF1ab/nsp31791L1791LctCctT101103AY.250.000607
ORF1ab/nsp31791L1791LctCctA2103AY.250.000012
ORF1ab/nsp31791L1791LctCctA7176B.1.1.280.022098
ORF1ab/nsp31791L1791LctCctT576B.1.1.280.001556
ORF1ab/nsp31791L1791LctCctT7272B.1.1.3110.025788
ORF1ab/nsp31791L1791LctCctT6666B.1.10.001197
ORF1ab/nsp31791L1791LctCctT6666B.1.5260.001551
ORF1ab/nsp31791L1791LctCctT6263AY.1000.002852
ORF1ab/nsp31791L1791LctCctA163AY.1000.000046
ORF1ab/nsp31791L1791LctCctT6363AY.200.002449
ORF1ab/nsp31791L1791LctCctT5563B.1.1770.000724
ORF1ab/nsp31791L1791LctCctA863B.1.1770.000105
ORF1ab/nsp31791L1791LctCctA6062AY.39.10.002377
ORF1ab/nsp31791L1791LctCctT262AY.39.10.000079
ORF1ab/nsp31791L1791LctCctT5858B.1.177.210.004435
ORF1ab/nsp31791L1791LctCctT4040B.1.36.80.04
ORF1ab/nsp31791L1791LctCctT3939AY.9.20.001432
ORF1ab/nsp31791L1791LctCctT3737B.1.2580.002462
ORF1ab/nsp31791L1791LctCctT3636B.1.595.30.947368
ORF1ab/nsp31791L1791LctCctT3435AY.290.000536
ORF1ab/nsp31791L1791LctCctG135AY.290.000016
ORF1ab/nsp31791L1791LctCctT3333B.1.6210.002921
ORF1ab/nsp31791L1791LctCctT3131AY.350.007224
ORF1ab/nsp31791L1791LctCctT3030B.1.177.550.06993
ORF1ab/nsp31791L1791LctCctT2929R.10.00261
ORF1ab/nsp31791L1791LctCctT2727B.1.1.5190.001072
ORF1ab/nsp31791L1791LctCctT2525AY.130.004024
ORF1ab/nsp31791L1791LctCctT2224AY.390.000544
ORF1ab/nsp31791L1791LctCctA224AY.390.000049
ORF1ab/nsp31791L1791LctCctT2424B.1.6370.001754
ORF1ab/nsp31791L1791LctCctT2023AY.260.000566
ORF1ab/nsp31791L1791LctCctG223AY.260.000057
ORF1ab/nsp31791L1791LctCctA123AY.260.000028
ORF1ab/nsp31791L1791LctCctT2222B.1.2310.709677
ORF1ab/nsp31791L1791LctCctT2020B.1.4290.000471
ORF1ab/nsp31791L1791LctCctT2020C.360.018215
ORF1ab/nsp31791L1791LctCctT1919AY.4.20.000412
ORF1ab/nsp31791L1791LctCctT1618AY.1020.000424
ORF1ab/nsp31791L1791LctCctA218AY.1020.000053
ORF1ab/nsp31791L1791LctCctT1818B.1.258.170.001871
ORF1ab/nsp31791L1791LctCctT1717AY.230.001186
ORF1ab/nsp31791L1791LctCctT1717Q.30.002466
ORF1ab/nsp31791L1791LctCctT1616B.1.1.2220.003264
ORF1ab/nsp31791L1791LctCctT1014AY.1190.000353
ORF1ab/nsp31791L1791LctCctA414AY.1190.000141
ORF1ab/nsp31791L1791LctCctT1414AY.470.000435
ORF1ab/nsp31791L1791LctCctT1313B.1.3510.000386
ORF1ab/nsp31791L1791LctCctT1212AY.640.007143
ORF1ab/nsp31791L1791LctCctT1212B.1.1.4320.01519
ORF1ab/nsp31791L1791LctCctT1012B.1.1600.000312
ORF1ab/nsp31791L1791LctCctA212B.1.1600.000062
ORF1ab/nsp31791L1791LctCctT1111AY.340.001067
ORF1ab/nsp31791L1791LctCctT1111AY.590.005826
ORF1ab/nsp31791L1791LctCctT1111B.1.1.5260.039007
ORF1ab/nsp31791L1791LctCctT1111B.1.3460.014417
ORF1ab/nsp31791L1791LctCctT1011B.1.360.001459
ORF1ab/nsp31791L1791LctCctA111B.1.360.000146
ORF1ab/nsp31791L1791LctCctT1111B.1.6270.022222
ORF1ab/nsp31791L1791LctCctT1010AY.98.10.000484
ORF1ab/nsp31791L1791LctCctT910B.1.5960.000784
ORF1ab/nsp31791L1791LctCctA110B.1.5960.000087
ORF1ab/nsp31791L1791LctCctT1010P.1.120.00484
ORF1ab/nsp31791L1791LctCctT1010P.30.015949
ORF1ab/nsp31791L1791LctCctT99AY.400.008679
ORF1ab/nsp31791L1791LctCctT99AY.460.000937
ORF1ab/nsp31791L1791LctCctT89B.1.1.4340.002788
ORF1ab/nsp31791L1791LctCctA19B.1.1.4340.000349
ORF1ab/nsp31791L1791LctCctT99B.1.1.500.00611
ORF1ab/nsp31791L1791LctCctT99B.1.1.620.243243
ORF1ab/nsp31791L1791LctCctT99B.1.2210.000639
ORF1ab/nsp31791L1791LctCctA48AY.1180.000251
ORF1ab/nsp31791L1791LctCctT48AY.1180.000251
ORF1ab/nsp31791L1791LctCctT88AY.420.000322
ORF1ab/nsp31791L1791LctCctT88AY.980.000632
ORF1ab/nsp31791L1791LctCctT77AY.320.003727
ORF1ab/nsp31791L1791LctCctT77B.1.1.2300.06422
ORF1ab/nsp31791L1791LctCctT77B.1.1.330.002946
ORF1ab/nsp31791L1791LctCctT77P.1.170.001132
ORF1ab/nsp31791L1791LctCctT66A.210.01662
ORF1ab/nsp31791L1791LctCctT66AY.46.50.00119
ORF1ab/nsp31791L1791LctCctT56AY.46.60.000361
ORF1ab/nsp31791L1791LctCctA16AY.46.60.000072
ORF1ab/nsp31791L1791LctCctT66AY.5.30.002024
ORF1ab/nsp31791L1791LctCctT66B.1.1.2290.034483
ORF1ab/nsp31791L1791LctCctT66B.1.1.2410.012422
ORF1ab/nsp31791L1791LctCctT66B.1.1.3710.0625
ORF1ab/nsp31791L1791LctCctT66B.1.2430.000418
ORF1ab/nsp31791L1791LctCctT66B.1.3110.001647
ORF1ab/nsp31791L1791LctCctT66B.1.36.290.003104
ORF1ab/nsp31791L1791LctCctT55AY.1170.000423
ORF1ab/nsp31791L1791LctCctT55AY.1210.000677
ORF1ab/nsp31791L1791LctCctT55AY.330.000334
ORF1ab/nsp31791L1791LctCctT45AY.450.000487
ORF1ab/nsp31791L1791LctCctG15AY.450.000122
ORF1ab/nsp31791L1791LctCctT45AY.750.000224
ORF1ab/nsp31791L1791LctCctA15AY.750.000056
ORF1ab/nsp31791L1791LctCctT55AY.75.10.000902
ORF1ab/nsp31791L1791LctCctT45B0.000511
ORF1ab/nsp31791L1791LctCctA15B0.000128
ORF1ab/nsp31791L1791LctCctT55B.1.1.10.001633
ORF1ab/nsp31791L1791LctCctT55B.1.4480.013123
ORF1ab/nsp31791L1791LctCctT55B.1.5740.010753
ORF1ab/nsp31791L1791LctCctT55B.1.5950.001305
ORF1ab/nsp31791L1791LctCctT55B.6.60.004444
ORF1ab/nsp31791L1791LctCctT35D.20.000225
ORF1ab/nsp31791L1791LctCctA25D.20.00015
ORF1ab/nsp31791L1791LctCctT44A.10.001127
ORF1ab/nsp31791L1791LctCctT44AY.3.10.000341
ORF1ab/nsp31791L1791LctCctT44AY.46.40.000658
ORF1ab/nsp31791L1791LctCctT44AY.60.000165
ORF1ab/nsp31791L1791LctCctT44AY.610.000419
ORF1ab/nsp31791L1791LctCctT44AY.700.000834
ORF1ab/nsp31791L1791LctCctT44AY.90.00027
ORF1ab/nsp31791L1791LctCctT44B.1.1.2430.016327
ORF1ab/nsp31791L1791LctCctA34B.1.1.3220.026316
ORF1ab/nsp31791L1791LctCctT14B.1.1.3220.008772
ORF1ab/nsp31791L1791LctCctT44B.1.1.370.000771
ORF1ab/nsp31791L1791LctCctT44B.1.3960.002823
ORF1ab/nsp31791L1791LctCctT44B.1.617.10.000516
ORF1ab/nsp31791L1791LctCctT44B.6.30.105263
ORF1ab/nsp31791L1791LctCctT44C.160.004242
ORF1ab/nsp31791L1791LctCctT44C.370.000464
ORF1ab/nsp31791L1791LctCctT33A.2.50.001497
ORF1ab/nsp31791L1791LctCctA33AY.1130.000427
ORF1ab/nsp31791L1791LctCctT33AY.1160.00086
ORF1ab/nsp31791L1791LctCctT33AY.1200.000112
ORF1ab/nsp31791L1791LctCctT33AY.140.000264
ORF1ab/nsp31791L1791LctCctT33AY.16.10.00141
ORF1ab/nsp31791L1791LctCctT33AY.190.003421
ORF1ab/nsp31791L1791LctCctT33AY.5.40.00083
ORF1ab/nsp31791L1791LctCctT33AY.540.000286
ORF1ab/nsp31791L1791LctCctT33AY.670.001393
ORF1ab/nsp31791L1791LctCctT33AY.820.004071
ORF1ab/nsp31791L1791LctCctT33AY.99.20.000276
ORF1ab/nsp31791L1791LctCctT33B.1.1.2580.009772
ORF1ab/nsp31791L1791LctCctT33B.1.1.2680.044776
ORF1ab/nsp31791L1791LctCctT33B.1.1.2840.000322
ORF1ab/nsp31791L1791LctCctT23B.1.1.700.000682
ORF1ab/nsp31791L1791LctCctA13B.1.1.700.000341
ORF1ab/nsp31791L1791LctCctT33B.1.177.40.000633
ORF1ab/nsp31791L1791LctCctT33B.1.177.860.00055
ORF1ab/nsp31791L1791LctCctT33B.1.2060.002447
ORF1ab/nsp31791L1791LctCctT33B.1.3690.000856
ORF1ab/nsp31791L1791LctCctG33B.1.4000.001287
ORF1ab/nsp31791L1791LctCctT33B.1.4620.021739
ORF1ab/nsp31791L1791LctCctT33B.1.5250.000339
ORF1ab/nsp31791L1791LctCctT33B.1.5600.013889
ORF1ab/nsp31791L1791LctCctT33P.1.140.000143
ORF1ab/nsp31791L1791LctCctT33P.1.150.000697
ORF1ab/nsp31791L1791LctCctT33P.1.70.000958
ORF1ab/nsp31791L1791LctCctT33P.20.00056
ORF1ab/nsp31791L1791LctCctT22AY.10.000791
ORF1ab/nsp31791L1791LctCctT22AY.1010.000981
ORF1ab/nsp31791L1791LctCctT22AY.1070.000932
ORF1ab/nsp31791L1791LctCctT22AY.1080.002205
ORF1ab/nsp31791L1791LctCctT22AY.1140.000462
ORF1ab/nsp31791L1791LctCctT22AY.120.10.000642
ORF1ab/nsp31791L1791LctCctT22AY.160.000759
ORF1ab/nsp31791L1791LctCctT22AY.370.000632
ORF1ab/nsp31791L1791LctCctT22B.1.1.1610.007067
ORF1ab/nsp31791L1791LctCctT22B.1.1.2140.000111
ORF1ab/nsp31791L1791LctCctT22B.1.1.250.001137
ORF1ab/nsp31791L1791LctCctT22B.1.1.2560.027397
ORF1ab/nsp31791L1791LctCctG22B.1.1.2630.003115
ORF1ab/nsp31791L1791LctCctT22B.1.1.2940.002532
ORF1ab/nsp31791L1791LctCctA12B.1.1.3060.000438
ORF1ab/nsp31791L1791LctCctT12B.1.1.3060.000438
ORF1ab/nsp31791L1791LctCctT22B.1.1.3180.000604
ORF1ab/nsp31791L1791LctCctT22B.1.1.4640.002946
ORF1ab/nsp31791L1791LctCctT22B.1.110.30.001437
ORF1ab/nsp31791L1791LctCctT22B.1.177.540.001213
ORF1ab/nsp31791L1791LctCctT22B.1.177.70.00033
ORF1ab/nsp31791L1791LctCctT22B.1.177.820.000955
ORF1ab/nsp31791L1791LctCctT22B.1.220.002635
ORF1ab/nsp31791L1791LctCctT22B.1.258.40.006897
ORF1ab/nsp31791L1791LctCctT22B.1.6090.000959
ORF1ab/nsp31791L1791LctCctT22B.1.6280.000705
ORF1ab/nsp31791L1791LctCctT22N.100.058824
ORF1ab/nsp31791L1791LctCctT22P.1.60.003891
ORF1ab/nsp31791L1791LctCctT22P.40.007605
ORF1ab/nsp31791L1791LctCctA11A0.000387
ORF1ab/nsp31791L1791LctCctT11A.2.5.20.001572
ORF1ab/nsp31791L1791LctCctT11A.23.10.000704
ORF1ab/nsp31791L1791LctCctT11A.250.018182
ORF1ab/nsp31791L1791LctCctT11AE.80.000489
ORF1ab/nsp31791L1791LctCctA11AY.1040.001984
ORF1ab/nsp31791L1791LctCctT11AY.1090.00074
ORF1ab/nsp31791L1791LctCctA11AY.120.000316
ORF1ab/nsp31791L1791LctCctT11AY.20.000356
ORF1ab/nsp31791L1791LctCctT11AY.240.000431
ORF1ab/nsp31791L1791LctCctT11AY.360.000148
ORF1ab/nsp31791L1791LctCctT11AY.380.000499
ORF1ab/nsp31791L1791LctCctT11AY.410.000294
ORF1ab/nsp31791L1791LctCctA11AY.520.000814
ORF1ab/nsp31791L1791LctCctT11AY.550.000917
ORF1ab/nsp31791L1791LctCctT11AY.650.000533
ORF1ab/nsp31791L1791LctCctT11AY.7.10.000113
ORF1ab/nsp31791L1791LctCctT11AY.7.20.000559
ORF1ab/nsp31791L1791LctCctT11AY.710.000475
ORF1ab/nsp31791L1791LctCctT11AY.870.000833
ORF1ab/nsp31791L1791LctCctT11AY.9.10.000084
ORF1ab/nsp31791L1791LctCctT11AY.940.000443
ORF1ab/nsp31791L1791LctCctT11AY.950.000761
ORF1ab/nsp31791L1791LctCctT11B.1.1.100.001115
ORF1ab/nsp31791L1791LctCctT11B.1.1.1170.009709
ORF1ab/nsp31791L1791LctCctT11B.1.1.120.007463
ORF1ab/nsp31791L1791LctCctT11B.1.1.1410.002012
ORF1ab/nsp31791L1791LctCctT11B.1.1.1700.001247
ORF1ab/nsp31791L1791LctCctT11B.1.1.1760.000439
ORF1ab/nsp31791L1791LctCctT11B.1.1.2100.005714
ORF1ab/nsp31791L1791LctCctT11B.1.1.2250.007194
ORF1ab/nsp31791L1791LctCctT11B.1.1.2310.003096
ORF1ab/nsp31791L1791LctCctT11B.1.1.2540.011236
ORF1ab/nsp31791L1791LctCctT11B.1.1.270.00565
ORF1ab/nsp31791L1791LctCctT11B.1.1.3010.001179
ORF1ab/nsp31791L1791LctCctT11B.1.1.3040.002809
ORF1ab/nsp31791L1791LctCctT11B.1.1.3050.003861
ORF1ab/nsp31791L1791LctCctT11B.1.1.3170.000412
ORF1ab/nsp31791L1791LctCctT11B.1.1.3360.016667
ORF1ab/nsp31791L1791LctCctA11B.1.1.3480.000796
ORF1ab/nsp31791L1791LctCctT11B.1.1.3540.004386
ORF1ab/nsp31791L1791LctCctT11B.1.1.3740.002375
ORF1ab/nsp31791L1791LctCctT11B.1.1.390.00051
ORF1ab/nsp31791L1791LctCctT11B.1.1.4020.011111
ORF1ab/nsp31791L1791LctCctT11B.1.1.4160.000905
ORF1ab/nsp31791L1791LctCctT11B.1.1.4190.007407
ORF1ab/nsp31791L1791LctCctT11B.1.1.4480.002033
ORF1ab/nsp31791L1791LctCctT11B.1.1.530.013699
ORF1ab/nsp31791L1791LctCctT11B.1.1110.001175
ORF1ab/nsp31791L1791LctCctT11B.1.1490.003425
ORF1ab/nsp31791L1791LctCctT11B.1.160.260.002421
ORF1ab/nsp31791L1791LctCctT11B.1.177.120.000152
ORF1ab/nsp31791L1791LctCctT11B.1.177.320.00135
ORF1ab/nsp31791L1791LctCctA11B.1.177.420.000894
ORF1ab/nsp31791L1791LctCctT11B.1.177.440.000519
ORF1ab/nsp31791L1791LctCctT11B.1.177.600.000218
ORF1ab/nsp31791L1791LctCctT11B.1.177.620.001192
ORF1ab/nsp31791L1791LctCctT11B.1.177.650.000665
ORF1ab/nsp31791L1791LctCctT11B.1.177.750.001041
ORF1ab/nsp31791L1791LctCctT11B.1.177.810.000189
ORF1ab/nsp31791L1791LctCctT11B.1.2340.000132
ORF1ab/nsp31791L1791LctCctT11B.1.2390.001221
ORF1ab/nsp31791L1791LctCctT11B.1.2400.000216
ORF1ab/nsp31791L1791LctCctA11B.1.240.10.025
ORF1ab/nsp31791L1791LctCctT11B.1.2560.017241
ORF1ab/nsp31791L1791LctCctT11B.1.2980.002114
ORF1ab/nsp31791L1791LctCctA11B.1.3010.005917
ORF1ab/nsp31791L1791LctCctT11B.1.3200.001245
ORF1ab/nsp31791L1791LctCctA11B.1.3380.008621
ORF1ab/nsp31791L1791LctCctT11B.1.3400.004292
ORF1ab/nsp31791L1791LctCctT11B.1.351.30.000876
ORF1ab/nsp31791L1791LctCctT11B.1.3670.000792
ORF1ab/nsp31791L1791LctCctT11B.1.3990.001934
ORF1ab/nsp31791L1791LctCctT11B.1.4040.001302
ORF1ab/nsp31791L1791LctCctA11B.1.4240.008065
ORF1ab/nsp31791L1791LctCctT11B.1.4280.00102
ORF1ab/nsp31791L1791LctCctT11B.1.4660.023256
ORF1ab/nsp31791L1791LctCctT11B.1.466.20.000391
ORF1ab/nsp31791L1791LctCctT11B.1.4690.00361
ORF1ab/nsp31791L1791LctCctT11B.1.4730.019231
ORF1ab/nsp31791L1791LctCctT11B.1.4990.00105
ORF1ab/nsp31791L1791LctCctT11B.1.5090.000866
ORF1ab/nsp31791L1791LctCctT11B.1.5460.003704
ORF1ab/nsp31791L1791LctCctT11B.1.5610.000397
ORF1ab/nsp31791L1791LctCctT11B.1.5650.00081
ORF1ab/nsp31791L1791LctCctT11B.1.5690.014493
ORF1ab/nsp31791L1791LctCctT11B.1.5760.000907
ORF1ab/nsp31791L1791LctCctT11B.1.5820.000491
ORF1ab/nsp31791L1791LctCctT11B.1.5870.001898
ORF1ab/nsp31791L1791LctCctT11B.1.6150.04
ORF1ab/nsp31791L1791LctCctA11B.1.6230.000536
ORF1ab/nsp31791L1791LctCctT11B.1.6250.002353
ORF1ab/nsp31791L1791LctCctT11B.290.003509
ORF1ab/nsp31791L1791LctCctT11B.400.000364
ORF1ab/nsp31791L1791LctCctT11B.60.00091
ORF1ab/nsp31791L1791LctCctT11C.180.002591
ORF1ab/nsp31791L1791LctCctT11C.20.016129
ORF1ab/nsp31791L1791LctCctT11C.270.018519
ORF1ab/nsp31791L1791LCtCTtA11C.350.000774
ORF1ab/nsp31791L1791LctCctT11P.1.100.000269
ORF1ab/nsp31791L1791LctCctT11Q.10.000126