CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1791F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31791L1791FL2609FnonsynCtcTtc504150280.9974218090-8092
ORF1ab/nsp31791L1791FL2609FnonsynCtCTtT5041130.002578858090-8092

Details of the mutation L1791F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31791L1791FCtcTtc50285041All0.000962
ORF1ab/nsp31791L1791FCtCTtT135041All0.000002
ORF1ab/nsp31791L1791FCtcTtc10041004B.1.1.70.000899
ORF1ab/nsp31791L1791FCtcTtc912912AY.40.001419
ORF1ab/nsp31791L1791FCtcTtc327327AY.99.10.507764
ORF1ab/nsp31791L1791FCtcTtc218218B.1.617.20.000821
ORF1ab/nsp31791L1791FCtcTtc205205B.1.258.170.021314
ORF1ab/nsp31791L1791FCtcTtc113113B.1.1770.001488
ORF1ab/nsp31791L1791FCtcTtc102102AY.1030.000633
ORF1ab/nsp31791L1791FCtcTtc9797B.520.979798
ORF1ab/nsp31791L1791FCtcTtc9595AY.430.000421
ORF1ab/nsp31791L1791FCtcTtc8787B.1.3510.002586
ORF1ab/nsp31791L1791FCtcTtc8686AY.30.000855
ORF1ab/nsp31791L1791FCtcTtc8484P.10.001323
ORF1ab/nsp31791L1791FCtcTtc7878B.1.20.000687
ORF1ab/nsp31791L1791FCtcTtc7474B.1.5260.001739
ORF1ab/nsp31791L1791FCtcTtc6969AY.250.000415
ORF1ab/nsp31791L1791FCtcTtc6666B.1.177.741
ORF1ab/nsp31791L1791FCtcTtc6363AY.440.000383
ORF1ab/nsp31791L1791FCtcTtc5252AY.340.005042
ORF1ab/nsp31791L1791FCtcTtc4848B.1.1.2220.009792
ORF1ab/nsp31791L1791FCtcTtc4242AY.1000.001932
ORF1ab/nsp31791L1791FCtcTtc4040XA0.888889
ORF1ab/nsp31791L1791FCtcTtc3939B.1.438.10.004183
ORF1ab/nsp31791L1791FCtcTtc3636B.1.4270.001818
ORF1ab/nsp31791L1791FCtcTtc3232B.1.4290.000753
ORF1ab/nsp31791L1791FCtcTtc3131AY.1020.000822
ORF1ab/nsp31791L1791FCtcTtc3131AY.4.20.000672
ORF1ab/nsp31791L1791FCtcTtc3030C.36.3.10.081522
ORF1ab/nsp31791L1791FCtcTtc2828B.10.000256
ORF1ab/nsp31791L1791FCtcTtc2828B.1.1.2140.001553
ORF1ab/nsp31791L1791FCtcTtc2828B.1.177.670.21374
ORF1ab/nsp31791L1791FCtcTtc2424B.1.10.000435
ORF1ab/nsp31791L1791FCtcTtc2424B.1.1.2160.021371
ORF1ab/nsp31791L1791FCtcTtc2424B.1.1600.000749
ORF1ab/nsp31791L1791FCtcTtc2323AY.260.000651
ORF1ab/nsp31791L1791FCtcTtc2222B.1.177.600.004806
ORF1ab/nsp31791L1791FCtcTtc2020P.1.140.000956
ORF1ab/nsp31791L1791FCtcTtc1818AZ.20.014778
ORF1ab/nsp31791L1791FCtcTtc1818B.1.6210.001593
ORF1ab/nsp31791L1791FCtcTtc1717AY.60.000699
ORF1ab/nsp31791L1791FCtcTtc1616B.1.2210.001137
ORF1ab/nsp31791L1791FCtcTtc1515AY.1040.029762
ORF1ab/nsp31791L1791FCtcTtc1515AY.290.000237
ORF1ab/nsp31791L1791FCtcTtc1414AY.90.000946
ORF1ab/nsp31791L1791FCtcTtc1414B.1.1.3110.005014
ORF1ab/nsp31791L1791FCtcTtc1414B.1.1.440.033735
ORF1ab/nsp31791L1791FCtcTtc1414B.1.1.5190.000556
ORF1ab/nsp31791L1791FCtcTtc1313B0.001662
ORF1ab/nsp31791L1791FCtcTtc1212AY.200.000466
ORF1ab/nsp31791L1791FCtcTtc1212AY.460.001249
ORF1ab/nsp31791L1791FCtcTtc1212AY.50.000248
ORF1ab/nsp31791L1791FCtCTtT1212B.1.177.60.011719
ORF1ab/nsp31791L1791FCtcTtc1212B.1.3690.003423
ORF1ab/nsp31791L1791FCtcTtc1111AY.98.10.000533
ORF1ab/nsp31791L1791FCtcTtc1111B.1.177.810.002083
ORF1ab/nsp31791L1791FCtcTtc1111B.1.177.860.002018
ORF1ab/nsp31791L1791FCtcTtc1111B.1.2430.000765
ORF1ab/nsp31791L1791FCtcTtc1010AY.1190.000353
ORF1ab/nsp31791L1791FCtcTtc1010AY.230.000697
ORF1ab/nsp31791L1791FCtcTtc1010AY.39.1.10.007246
ORF1ab/nsp31791L1791FCtcTtc1010AY.470.000311
ORF1ab/nsp31791L1791FCtcTtc1010B.1.360.001459
ORF1ab/nsp31791L1791FCtcTtc99AY.46.60.00065
ORF1ab/nsp31791L1791FCtcTtc99AY.750.000504
ORF1ab/nsp31791L1791FCtcTtc99AY.980.000711
ORF1ab/nsp31791L1791FCtcTtc99B.1.5750.002731
ORF1ab/nsp31791L1791FCtcTtc99B.1.5960.000784
ORF1ab/nsp31791L1791FCtcTtc88AY.1130.001139
ORF1ab/nsp31791L1791FCtcTtc88AY.330.000534
ORF1ab/nsp31791L1791FCtcTtc88AY.450.000973
ORF1ab/nsp31791L1791FCtcTtc88B.1.5250.000905
ORF1ab/nsp31791L1791FCtcTtc77AY.9.20.000257
ORF1ab/nsp31791L1791FCtcTtc77B.1.2580.000466
ORF1ab/nsp31791L1791FCtcTtc77B.1.4000.003003
ORF1ab/nsp31791L1791FCtcTtc66A.2.50.002994
ORF1ab/nsp31791L1791FCtcTtc66AY.1200.000223
ORF1ab/nsp31791L1791FCtcTtc66B.1.3960.004234
ORF1ab/nsp31791L1791FCtcTtc66B.1.4970.001889
ORF1ab/nsp31791L1791FCtcTtc66B.1.5880.00546
ORF1ab/nsp31791L1791FCtcTtc66B.1.6200.005676
ORF1ab/nsp31791L1791FCtcTtc55AY.1160.001434
ORF1ab/nsp31791L1791FCtcTtc55AY.1170.000423
ORF1ab/nsp31791L1791FCtcTtc55AY.3.10.000426
ORF1ab/nsp31791L1791FCtcTtc55AY.420.000201
ORF1ab/nsp31791L1791FCtcTtc55B.1.177.440.002595
ORF1ab/nsp31791L1791FCtcTtc55B.1.6370.000365
ORF1ab/nsp31791L1791FCtcTtc44AY.1180.000251
ORF1ab/nsp31791L1791FCtcTtc44AY.390.000099
ORF1ab/nsp31791L1791FCtcTtc44AY.610.000419
ORF1ab/nsp31791L1791FCtcTtc44AZ.30.006079
ORF1ab/nsp31791L1791FCtcTtc44B.1.1.1700.004988
ORF1ab/nsp31791L1791FCtcTtc44B.1.1.280.001245
ORF1ab/nsp31791L1791FCtcTtc44B.1.110.30.002874
ORF1ab/nsp31791L1791FCtcTtc44B.1.177.570.001124
ORF1ab/nsp31791L1791FCtcTtc44B.1.2360.008214
ORF1ab/nsp31791L1791FCtcTtc44C.370.000464
ORF1ab/nsp31791L1791FCtcTtc44P.1.100.001078
ORF1ab/nsp31791L1791FCtcTtc44R.10.00036
ORF1ab/nsp31791L1791FCtcTtc33AY.10.001187
ORF1ab/nsp31791L1791FCtcTtc33AY.130.000483
ORF1ab/nsp31791L1791FCtcTtc33AY.300.001187
ORF1ab/nsp31791L1791FCtcTtc33AY.39.10.000119
ORF1ab/nsp31791L1791FCtcTtc33AY.640.001786
ORF1ab/nsp31791L1791FCtcTtc33AY.700.000626
ORF1ab/nsp31791L1791FCtcTtc33AY.99.20.000276
ORF1ab/nsp31791L1791FCtcTtc33B.1.1.3060.001315
ORF1ab/nsp31791L1791FCtcTtc33B.1.1.3260.005282
ORF1ab/nsp31791L1791FCtcTtc33B.1.1.3480.002389
ORF1ab/nsp31791L1791FCtcTtc33B.1.1.370.000579
ORF1ab/nsp31791L1791FCtcTtc33B.1.1.700.001023
ORF1ab/nsp31791L1791FCtcTtc33B.1.177.210.000229
ORF1ab/nsp31791L1791FCtcTtc33B.1.177.520.005272
ORF1ab/nsp31791L1791FCtcTtc33B.1.177.70.000495
ORF1ab/nsp31791L1791FCtcTtc33B.1.5170.001281
ORF1ab/nsp31791L1791FCtcTtc33B.1.5950.000783
ORF1ab/nsp31791L1791FCtcTtc33C.350.002322
ORF1ab/nsp31791L1791FCtcTtc33Q.40.001364
ORF1ab/nsp31791L1791FCtcTtc22AL.10.025974
ORF1ab/nsp31791L1791FCtcTtc22AY.1210.000271
ORF1ab/nsp31791L1791FCtcTtc22AY.23.10.000835
ORF1ab/nsp31791L1791FCtcTtc22AY.34.10.00102
ORF1ab/nsp31791L1791FCtcTtc22AY.370.000632
ORF1ab/nsp31791L1791FCtcTtc22AY.46.40.000329
ORF1ab/nsp31791L1791FCtcTtc22AY.5.30.000675
ORF1ab/nsp31791L1791FCtcTtc22AY.540.000191
ORF1ab/nsp31791L1791FCtcTtc22AY.590.001059
ORF1ab/nsp31791L1791FCtcTtc22AY.620.000871
ORF1ab/nsp31791L1791FCtcTtc22AY.900.001369
ORF1ab/nsp31791L1791FCtcTtc22B.1.1.10.000653
ORF1ab/nsp31791L1791FCtcTtc22B.1.1.1280.014184
ORF1ab/nsp31791L1791FCtcTtc22B.1.1.1410.004024
ORF1ab/nsp31791L1791FCtcTtc22B.1.1.2280.006098
ORF1ab/nsp31791L1791FCtcTtc22B.1.1.3290.007692
ORF1ab/nsp31791L1791FCtCTtT12B.1.1.620.027027
ORF1ab/nsp31791L1791FCtcTtc12B.1.1.620.027027
ORF1ab/nsp31791L1791FCtcTtc22B.1.1.630.000772
ORF1ab/nsp31791L1791FCtcTtc22B.1.177.110.003396
ORF1ab/nsp31791L1791FCtcTtc22B.1.177.40.000422
ORF1ab/nsp31791L1791FCtcTtc22B.1.177.400.010309
ORF1ab/nsp31791L1791FCtcTtc22B.1.1990.008264
ORF1ab/nsp31791L1791FCtcTtc22B.1.2130.029851
ORF1ab/nsp31791L1791FCtcTtc22B.1.2340.000264
ORF1ab/nsp31791L1791FCtcTtc22B.1.258.30.00335
ORF1ab/nsp31791L1791FCtcTtc22B.1.3130.013158
ORF1ab/nsp31791L1791FCtcTtc22B.1.3490.00143
ORF1ab/nsp31791L1791FCtcTtc22B.1.36.170.000988
ORF1ab/nsp31791L1791FCtcTtc22B.1.36.90.006431
ORF1ab/nsp31791L1791FCtcTtc22B.1.3600.025316
ORF1ab/nsp31791L1791FCtcTtc22B.1.3980.005952
ORF1ab/nsp31791L1791FCtcTtc22B.1.5650.001621
ORF1ab/nsp31791L1791FCtcTtc22B.1.617.10.000258
ORF1ab/nsp31791L1791FCtcTtc22B.1.6230.001073
ORF1ab/nsp31791L1791FCtcTtc22B.1.6250.004706
ORF1ab/nsp31791L1791FCtcTtc22C.36.10.008299
ORF1ab/nsp31791L1791FCtcTtc22P.1.150.000465
ORF1ab/nsp31791L1791FCtcTtc11A.2.20.001689
ORF1ab/nsp31791L1791FCtcTtc11A.23.10.000704
ORF1ab/nsp31791L1791FCtcTtc11A.50.001923
ORF1ab/nsp31791L1791FCtcTtc11AD.20.000219
ORF1ab/nsp31791L1791FCtcTtc11AY.100.00053
ORF1ab/nsp31791L1791FCtcTtc11AY.1050.000643
ORF1ab/nsp31791L1791FCtcTtc11AY.1080.001103
ORF1ab/nsp31791L1791FCtcTtc11AY.1090.00074
ORF1ab/nsp31791L1791FCtcTtc11AY.1110.000183
ORF1ab/nsp31791L1791FCtcTtc11AY.1140.000231
ORF1ab/nsp31791L1791FCtcTtc11AY.120.000316
ORF1ab/nsp31791L1791FCtcTtc11AY.270.000065
ORF1ab/nsp31791L1791FCtcTtc11AY.320.000532
ORF1ab/nsp31791L1791FCtcTtc11AY.360.000148
ORF1ab/nsp31791L1791FCtcTtc11AY.4.2.10.000149
ORF1ab/nsp31791L1791FCtcTtc11AY.4.50.000107
ORF1ab/nsp31791L1791FCtcTtc11AY.530.000288
ORF1ab/nsp31791L1791FCtcTtc11AY.690.000187
ORF1ab/nsp31791L1791FCtcTtc11AY.710.000475
ORF1ab/nsp31791L1791FCtcTtc11AY.730.000665
ORF1ab/nsp31791L1791FCtcTtc11AY.820.001357
ORF1ab/nsp31791L1791FCtcTtc11AY.850.000427
ORF1ab/nsp31791L1791FCtcTtc11AY.870.000833
ORF1ab/nsp31791L1791FCtcTtc11AY.970.001701
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.1290.009174
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.1940.00495
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.1980.001468
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.2630.001558
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.2840.000107
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.2960.018182
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3010.001179
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3050.003861
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3090.005848
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3180.000302
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.330.000421
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3440.010753
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3660.015873
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3680.003086
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3690.000446
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3700.012658
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.3720.000689
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.4160.000905
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.4230.0625
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.4860.001577
ORF1ab/nsp31791L1791FCtcTtc11B.1.1.5230.001563
ORF1ab/nsp31791L1791FCtcTtc11B.1.1280.000635
ORF1ab/nsp31791L1791FCtcTtc11B.1.1460.004237
ORF1ab/nsp31791L1791FCtcTtc11B.1.1580.02381
ORF1ab/nsp31791L1791FCtcTtc11B.1.1700.00431
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.160.000664
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.420.000894
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.500.004695
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.650.000665
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.730.000566
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.770.000726
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.80.000752
ORF1ab/nsp31791L1791FCtcTtc11B.1.177.820.000477
ORF1ab/nsp31791L1791FCtcTtc11B.1.2320.000537
ORF1ab/nsp31791L1791FCtcTtc11B.1.2400.000216
ORF1ab/nsp31791L1791FCtcTtc11B.1.258.110.000396
ORF1ab/nsp31791L1791FCtcTtc11B.1.2800.007143
ORF1ab/nsp31791L1791FCtcTtc11B.1.3110.000275
ORF1ab/nsp31791L1791FCtcTtc11B.1.36.180.00042
ORF1ab/nsp31791L1791FCtcTtc11B.1.36.310.001751
ORF1ab/nsp31791L1791FCtcTtc11B.1.36.360.000602
ORF1ab/nsp31791L1791FCtcTtc11B.1.3710.001122
ORF1ab/nsp31791L1791FCtcTtc11B.1.3910.001127
ORF1ab/nsp31791L1791FCtcTtc11B.1.4150.014286
ORF1ab/nsp31791L1791FCtcTtc11B.1.4250.002994
ORF1ab/nsp31791L1791FCtcTtc11B.1.4560.003268
ORF1ab/nsp31791L1791FCtcTtc11B.1.466.20.000391
ORF1ab/nsp31791L1791FCtcTtc11B.1.4790.038462
ORF1ab/nsp31791L1791FCtcTtc11B.1.4990.00105
ORF1ab/nsp31791L1791FCtcTtc11B.1.5090.000866
ORF1ab/nsp31791L1791FCtcTtc11B.1.5460.003704
ORF1ab/nsp31791L1791FCtcTtc11B.1.5610.000397
ORF1ab/nsp31791L1791FCtcTtc11B.1.5640.000426
ORF1ab/nsp31791L1791FCtcTtc11B.1.564.10.001577
ORF1ab/nsp31791L1791FCtcTtc11B.1.5760.000907
ORF1ab/nsp31791L1791FCtcTtc11B.1.6090.000479
ORF1ab/nsp31791L1791FCtcTtc11B.1.6280.000352
ORF1ab/nsp31791L1791FCtcTtc11B.30.000831
ORF1ab/nsp31791L1791FCtcTtc11B.4.10.018868
ORF1ab/nsp31791L1791FCtcTtc11B.560.028571
ORF1ab/nsp31791L1791FCtcTtc11B.6.60.000889
ORF1ab/nsp31791L1791FCtcTtc11C.180.002591
ORF1ab/nsp31791L1791FCtcTtc11C.230.005814
ORF1ab/nsp31791L1791FCtcTtc11D.20.000075
ORF1ab/nsp31791L1791FCtcTtc11N.30.005814
ORF1ab/nsp31791L1791FCtcTtc11P.1.170.000162
ORF1ab/nsp31791L1791FCtcTtc11P.20.000187
ORF1ab/nsp31791L1791FCtcTtc11Q.30.000145
ORF1ab/nsp31791L1791FCtcTtc11Q.80.000165
ORF1ab/nsp31791L1791FCtcTtc11W.20.004831