CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1709R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31709L1709RL2527RnonsynCTgAGg210.57844-7846
ORF1ab/nsp31709L1709RL2527RnonsyncTgcGg210.57844-7846

Details of the mutation L1709R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31709L1709RCTgAGg12All0
ORF1ab/nsp31709L1709RcTgcGg12All0
ORF1ab/nsp31709L1709RCTgAGg11B.1.3320.003497
ORF1ab/nsp31709L1709RcTgcGg11P.1.140.000048