CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1700R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31700L1700RL2518RnonsyncTccGc67650.9701497817-7819
ORF1ab/nsp31700L1700RL2518RnonsyncTCcGT6720.02985077817-7819

Details of the mutation L1700R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31700L1700RcTccGc6567All0.000012
ORF1ab/nsp31700L1700RcTCcGT267All0
ORF1ab/nsp31700L1700RcTccGc3939AY.4.20.000846
ORF1ab/nsp31700L1700RcTccGc1515B.1.1.70.000013
ORF1ab/nsp31700L1700RcTccGc66B.1.5950.001566
ORF1ab/nsp31700L1700RcTCcGT240.111111
ORF1ab/nsp31700L1700RcTccGc240.111111
ORF1ab/nsp31700L1700RcTccGc33AY.40.000005