CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1700F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31700L1700FL2518FnonsynCtcTtc8148130.9987717817-7819
ORF1ab/nsp31700L1700FL2518FnonsynCtCTtT81410.00122857817-7819

Details of the mutation L1700F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31700L1700FCtcTtc813814All0.000155
ORF1ab/nsp31700L1700FCtCTtT1814All0
ORF1ab/nsp31700L1700FCtcTtc196197B.1.1.70.000175
ORF1ab/nsp31700L1700FCtCTtT1197B.1.1.70.000001
ORF1ab/nsp31700L1700FCtcTtc119119AY.330.007947
ORF1ab/nsp31700L1700FCtcTtc7676AY.430.000337
ORF1ab/nsp31700L1700FCtcTtc3333B.1.617.20.000124
ORF1ab/nsp31700L1700FCtcTtc2929AY.30.000288
ORF1ab/nsp31700L1700FCtcTtc2828AY.40.000044
ORF1ab/nsp31700L1700FCtcTtc2222B.1.20.000194
ORF1ab/nsp31700L1700FCtcTtc2121B.1.10.000381
ORF1ab/nsp31700L1700FCtcTtc1818AY.1020.000477
ORF1ab/nsp31700L1700FCtcTtc1515AY.390.000371
ORF1ab/nsp31700L1700FCtcTtc1414B.1.3510.000416
ORF1ab/nsp31700L1700FCtcTtc1313AY.1030.000081
ORF1ab/nsp31700L1700FCtcTtc1212B.1.1770.000158
ORF1ab/nsp31700L1700FCtcTtc1111B.1.177.810.002083
ORF1ab/nsp31700L1700FCtcTtc1111B.1.2430.000765
ORF1ab/nsp31700L1700FCtcTtc1010AY.250.00006
ORF1ab/nsp31700L1700FCtcTtc1010B.1.5960.000871
ORF1ab/nsp31700L1700FCtcTtc99B.1.177.40.0019
ORF1ab/nsp31700L1700FCtcTtc88B.1.177.870.005822
ORF1ab/nsp31700L1700FCtcTtc77AY.260.000198
ORF1ab/nsp31700L1700FCtcTtc77AY.440.000043
ORF1ab/nsp31700L1700FCtcTtc77AY.750.000392
ORF1ab/nsp31700L1700FCtcTtc55B.10.000046
ORF1ab/nsp31700L1700FCtcTtc44AY.420.000161
ORF1ab/nsp31700L1700FCtcTtc44B.1.4290.000094
ORF1ab/nsp31700L1700FCtcTtc330.166667
ORF1ab/nsp31700L1700FCtcTtc33AY.1170.000254
ORF1ab/nsp31700L1700FCtcTtc33AY.50.000062
ORF1ab/nsp31700L1700FCtcTtc33AY.540.000286
ORF1ab/nsp31700L1700FCtcTtc33AY.980.000237
ORF1ab/nsp31700L1700FCtcTtc33B.1.1.3690.001339
ORF1ab/nsp31700L1700FCtcTtc33B.1.1600.000094
ORF1ab/nsp31700L1700FCtcTtc33B.1.2210.000213
ORF1ab/nsp31700L1700FCtcTtc33B.1.3960.002117
ORF1ab/nsp31700L1700FCtcTtc33B.1.6350.052632
ORF1ab/nsp31700L1700FCtcTtc33B.6.60.002667
ORF1ab/nsp31700L1700FCtcTtc33P.10.000047
ORF1ab/nsp31700L1700FCtcTtc22AY.1060.00067
ORF1ab/nsp31700L1700FCtcTtc22AY.1180.000125
ORF1ab/nsp31700L1700FCtcTtc22AY.120.000632
ORF1ab/nsp31700L1700FCtcTtc22AY.290.000032
ORF1ab/nsp31700L1700FCtcTtc22AY.360.000296
ORF1ab/nsp31700L1700FCtcTtc22AY.39.10.000079
ORF1ab/nsp31700L1700FCtcTtc22AY.4.20.000043
ORF1ab/nsp31700L1700FCtcTtc22AY.450.000243
ORF1ab/nsp31700L1700FCtcTtc22AY.460.000208
ORF1ab/nsp31700L1700FCtcTtc22AY.5.40.000553
ORF1ab/nsp31700L1700FCtcTtc22AY.610.00021
ORF1ab/nsp31700L1700FCtcTtc22AY.870.001665
ORF1ab/nsp31700L1700FCtcTtc22AY.900.001369
ORF1ab/nsp31700L1700FCtcTtc22B.1.1.1640.010309
ORF1ab/nsp31700L1700FCtcTtc22B.1.1.2140.000111
ORF1ab/nsp31700L1700FCtcTtc22B.1.1.5190.000079
ORF1ab/nsp31700L1700FCtcTtc22B.1.2340.000264
ORF1ab/nsp31700L1700FCtcTtc22B.1.351.30.001753
ORF1ab/nsp31700L1700FCtcTtc22B.1.5260.000047
ORF1ab/nsp31700L1700FCtcTtc22P.1.10.000635
ORF1ab/nsp31700L1700FCtcTtc11A.23.10.000704
ORF1ab/nsp31700L1700FCtcTtc11AD.20.000219
ORF1ab/nsp31700L1700FCtcTtc11AH.30.003802
ORF1ab/nsp31700L1700FCtcTtc11AY.1000.000046
ORF1ab/nsp31700L1700FCtcTtc11AY.1090.00074
ORF1ab/nsp31700L1700FCtcTtc11AY.200.000039
ORF1ab/nsp31700L1700FCtcTtc11AY.230.00007
ORF1ab/nsp31700L1700FCtcTtc11AY.29.10.000221
ORF1ab/nsp31700L1700FCtcTtc11AY.3.10.000085
ORF1ab/nsp31700L1700FCtcTtc11AY.340.000097
ORF1ab/nsp31700L1700FCtcTtc11AY.4.2.10.000149
ORF1ab/nsp31700L1700FCtcTtc11AY.4.50.000107
ORF1ab/nsp31700L1700FCtcTtc11AY.590.00053
ORF1ab/nsp31700L1700FCtcTtc11AY.680.000274
ORF1ab/nsp31700L1700FCtcTtc11AY.740.000116
ORF1ab/nsp31700L1700FCtcTtc11AY.850.000427
ORF1ab/nsp31700L1700FCtcTtc11AY.9.20.000037
ORF1ab/nsp31700L1700FCtcTtc11AY.920.000287
ORF1ab/nsp31700L1700FCtcTtc11B.1.1.2570.009709
ORF1ab/nsp31700L1700FCtcTtc11B.1.1.330.000421
ORF1ab/nsp31700L1700FCtcTtc11B.1.1.370.000193
ORF1ab/nsp31700L1700FCtcTtc11B.1.1.4340.000349
ORF1ab/nsp31700L1700FCtcTtc11B.1.1.580.005376
ORF1ab/nsp31700L1700FCtcTtc11B.1.1.630.000386
ORF1ab/nsp31700L1700FCtcTtc11B.1.110.30.000718
ORF1ab/nsp31700L1700FCtcTtc11B.1.1180.006711
ORF1ab/nsp31700L1700FCtcTtc11B.1.177.750.001041
ORF1ab/nsp31700L1700FCtcTtc11B.1.177.760.002494
ORF1ab/nsp31700L1700FCtcTtc11B.1.3110.000275
ORF1ab/nsp31700L1700FCtcTtc11B.1.360.000146
ORF1ab/nsp31700L1700FCtcTtc11B.1.36.310.001751
ORF1ab/nsp31700L1700FCtcTtc11B.1.4270.00005
ORF1ab/nsp31700L1700FCtcTtc11B.1.438.10.000107
ORF1ab/nsp31700L1700FCtcTtc11B.1.4590.004082
ORF1ab/nsp31700L1700FCtcTtc11B.1.4990.00105
ORF1ab/nsp31700L1700FCtcTtc11B.1.5250.000113
ORF1ab/nsp31700L1700FCtcTtc11B.1.5640.000426
ORF1ab/nsp31700L1700FCtcTtc11B.1.5650.00081
ORF1ab/nsp31700L1700FCtcTtc11B.1.5670.003333
ORF1ab/nsp31700L1700FCtcTtc11B.1.5880.00091
ORF1ab/nsp31700L1700FCtcTtc11B.1.6210.000089
ORF1ab/nsp31700L1700FCtcTtc11B.30.000831
ORF1ab/nsp31700L1700FCtcTtc11B.550.00295
ORF1ab/nsp31700L1700FCtcTtc11C.36.30.000567
ORF1ab/nsp31700L1700FCtcTtc11D.20.000075
ORF1ab/nsp31700L1700FCtcTtc11P.1.150.000232
ORF1ab/nsp31700L1700FCtcTtc11P.20.000187
ORF1ab/nsp31700L1700FCtcTtc11Q.80.000165