CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1525del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31525L1525delL2343deldelTTG---12512517292-7294

Details of the mutation L1525del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31525L1525delTTG---125125All0.000024
ORF1ab/nsp31525L1525delTTG---2828B.1.1.70.000025
ORF1ab/nsp31525L1525delTTG---1010B.1.617.20.000038
ORF1ab/nsp31525L1525delTTG---99AY.430.00004
ORF1ab/nsp31525L1525delTTG---66B.1.10.000109
ORF1ab/nsp31525L1525delTTG---55B.10.000046
ORF1ab/nsp31525L1525delTTG---440.222222
ORF1ab/nsp31525L1525delTTG---33AY.250.000018
ORF1ab/nsp31525L1525delTTG---33AY.40.000005
ORF1ab/nsp31525L1525delTTG---33AY.420.000121
ORF1ab/nsp31525L1525delTTG---22B.1.1770.000026
ORF1ab/nsp31525L1525delTTG---22B.1.4110.007407
ORF1ab/nsp31525L1525delTTG---22B.1.4970.00063
ORF1ab/nsp31525L1525delTTG---22B.1.617.10.000258
ORF1ab/nsp31525L1525delTTG---11A.280.002646
ORF1ab/nsp31525L1525delTTG---11AD.20.000219
ORF1ab/nsp31525L1525delTTG---11AY.1010.00049
ORF1ab/nsp31525L1525delTTG---11AY.1030.000006
ORF1ab/nsp31525L1525delTTG---11AY.1200.000037
ORF1ab/nsp31525L1525delTTG---11AY.120.20.001285
ORF1ab/nsp31525L1525delTTG---11AY.30.00001
ORF1ab/nsp31525L1525delTTG---11AY.330.000067
ORF1ab/nsp31525L1525delTTG---11AY.34.10.00051
ORF1ab/nsp31525L1525delTTG---11AY.360.000148
ORF1ab/nsp31525L1525delTTG---11AY.4.30.000842
ORF1ab/nsp31525L1525delTTG---11AY.4.50.000107
ORF1ab/nsp31525L1525delTTG---11AY.440.000006
ORF1ab/nsp31525L1525delTTG---11AY.46.60.000072
ORF1ab/nsp31525L1525delTTG---11AY.50.000021
ORF1ab/nsp31525L1525delTTG---11AY.660.00107
ORF1ab/nsp31525L1525delTTG---11AY.670.000464
ORF1ab/nsp31525L1525delTTG---11AY.750.000056
ORF1ab/nsp31525L1525delTTG---11AY.760.004831
ORF1ab/nsp31525L1525delTTG---11AY.840.000437
ORF1ab/nsp31525L1525delTTG---11AY.90.000068
ORF1ab/nsp31525L1525delTTG---11AY.9.20.000037
ORF1ab/nsp31525L1525delTTG---11B.1.1.1590.004673
ORF1ab/nsp31525L1525delTTG---11B.1.1.2210.010101
ORF1ab/nsp31525L1525delTTG---11B.1.1.3060.000438
ORF1ab/nsp31525L1525delTTG---11B.1.1.3540.004386
ORF1ab/nsp31525L1525delTTG---11B.1.1.460.004367
ORF1ab/nsp31525L1525delTTG---11B.1.1.5190.00004
ORF1ab/nsp31525L1525delTTG---11B.1.1150.021739
ORF1ab/nsp31525L1525delTTG---11B.1.1600.000031
ORF1ab/nsp31525L1525delTTG---11B.1.177.620.001192
ORF1ab/nsp31525L1525delTTG---11B.1.20.000009
ORF1ab/nsp31525L1525delTTG---11B.1.2100.002132
ORF1ab/nsp31525L1525delTTG---11B.1.2580.000067
ORF1ab/nsp31525L1525delTTG---11B.1.3510.00003
ORF1ab/nsp31525L1525delTTG---11B.1.4150.014286
ORF1ab/nsp31525L1525delTTG---11B.1.416.10.001563
ORF1ab/nsp31525L1525delTTG---11B.1.4530.003236
ORF1ab/nsp31525L1525delTTG---11B.1.5250.000113
ORF1ab/nsp31525L1525delTTG---11B.1.5260.000024
ORF1ab/nsp31525L1525delTTG---11B.1.575.10.002439
ORF1ab/nsp31525L1525delTTG---11B.1.6210.000089
ORF1ab/nsp31525L1525delTTG---11B.1.6280.000352
ORF1ab/nsp31525L1525delTTG---11P.10.000016
ORF1ab/nsp31525L1525delTTG---11P.1.150.000232
ORF1ab/nsp31525L1525delTTG---11Q.80.000165