CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1511F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31511L1511FL2329FnonsynttGttT104910370.9885617250-7252
ORF1ab/nsp31511L1511FL2329FnonsynttGttC1049120.01143957250-7252

Details of the mutation L1511F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31511L1511FttGttT10371049All0.000198
ORF1ab/nsp31511L1511FttGttC121049All0.000002
ORF1ab/nsp31511L1511FttGttT673676AY.40.001047
ORF1ab/nsp31511L1511FttGttC3676AY.40.000005
ORF1ab/nsp31511L1511FttGttT3839AY.430.000168
ORF1ab/nsp31511L1511FttGttC139AY.430.000004
ORF1ab/nsp31511L1511FttGttT3333AY.1030.000205
ORF1ab/nsp31511L1511FttGttT3131B.1.617.20.000117
ORF1ab/nsp31511L1511FttGttT2323AY.250.000138
ORF1ab/nsp31511L1511FttGttT2022AY.1020.00053
ORF1ab/nsp31511L1511FttGttC222AY.1020.000053
ORF1ab/nsp31511L1511FttGttT1919AY.60.000781
ORF1ab/nsp31511L1511FttGttT1719B.1.1.70.000015
ORF1ab/nsp31511L1511FttGttC219B.1.1.70.000002
ORF1ab/nsp31511L1511FttGttT1818AY.750.001008
ORF1ab/nsp31511L1511FttGttT1616AY.440.000097
ORF1ab/nsp31511L1511FttGttT1616B.1.2430.001113
ORF1ab/nsp31511L1511FttGttT1515AY.390.000371
ORF1ab/nsp31511L1511FttGttT1414AY.30.000139
ORF1ab/nsp31511L1511FttGttT1111AY.4.20.000239
ORF1ab/nsp31511L1511FttGttT1010B.1.20.000088
ORF1ab/nsp31511L1511FttGttT77B.10.000064
ORF1ab/nsp31511L1511FttGttT56AY.50.000103
ORF1ab/nsp31511L1511FttGttC16AY.50.000021
ORF1ab/nsp31511L1511FttGttT55AY.1210.000677
ORF1ab/nsp31511L1511FttGttT44AY.99.20.000369
ORF1ab/nsp31511L1511FttGttT34B.1.4290.000071
ORF1ab/nsp31511L1511FttGttC14B.1.4290.000024
ORF1ab/nsp31511L1511FttGttT33B.1.5250.000339
ORF1ab/nsp31511L1511FttGttT220.111111
ORF1ab/nsp31511L1511FttGttT22AY.1170.000169
ORF1ab/nsp31511L1511FttGttT22AY.3.10.000171
ORF1ab/nsp31511L1511FttGttT22AY.330.000134
ORF1ab/nsp31511L1511FttGttT22AY.39.10.000079
ORF1ab/nsp31511L1511FttGttT22AY.420.00008
ORF1ab/nsp31511L1511FttGttT22AY.460.000208
ORF1ab/nsp31511L1511FttGttT22AY.7.20.001119
ORF1ab/nsp31511L1511FttGttT22B.1.1770.000026
ORF1ab/nsp31511L1511FttGttT22B.1.5090.001732
ORF1ab/nsp31511L1511FttGttT22B.1.5960.000174
ORF1ab/nsp31511L1511FttGttT11AY.1060.000335
ORF1ab/nsp31511L1511FttGttT11AY.1070.000466
ORF1ab/nsp31511L1511FttGttT11AY.1100.000113
ORF1ab/nsp31511L1511FttGttT11AY.1110.000183
ORF1ab/nsp31511L1511FttGttT11AY.1190.000035
ORF1ab/nsp31511L1511FttGttT11AY.190.00114
ORF1ab/nsp31511L1511FttGttT11AY.200.000039
ORF1ab/nsp31511L1511FttGttT11AY.230.00007
ORF1ab/nsp31511L1511FttGttT11AY.260.000028
ORF1ab/nsp31511L1511FttGttT11AY.290.000016
ORF1ab/nsp31511L1511FttGttT11AY.46.20.000635
ORF1ab/nsp31511L1511FttGttT11AY.46.60.000072
ORF1ab/nsp31511L1511FttGttT11AY.5.30.000337
ORF1ab/nsp31511L1511FttGttT11AY.530.000288
ORF1ab/nsp31511L1511FttGttT11AY.550.000917
ORF1ab/nsp31511L1511FttGttT11AY.630.000387
ORF1ab/nsp31511L1511FttGttC11AY.70.000196
ORF1ab/nsp31511L1511FttGttT11AY.9.20.000037
ORF1ab/nsp31511L1511FttGttT11B.1.10.000018
ORF1ab/nsp31511L1511FttGttT11B.1.1.610.008772
ORF1ab/nsp31511L1511FttGttT11B.1.110.30.000718
ORF1ab/nsp31511L1511FttGttT11B.1.1600.000031
ORF1ab/nsp31511L1511FttGttT11B.1.160.160.000929
ORF1ab/nsp31511L1511FttGttT11B.1.177.210.000076
ORF1ab/nsp31511L1511FttGttT11B.1.177.560.000668
ORF1ab/nsp31511L1511FttGttC11B.1.177.650.000665
ORF1ab/nsp31511L1511FttGttT11B.1.2210.000071
ORF1ab/nsp31511L1511FttGttT11B.1.2400.000216
ORF1ab/nsp31511L1511FttGttT11B.1.2580.000067
ORF1ab/nsp31511L1511FttGttT11B.1.3690.000285
ORF1ab/nsp31511L1511FttGttT11B.1.5260.000024
ORF1ab/nsp31511L1511FttGttT11B.1.5880.00091
ORF1ab/nsp31511L1511FttGttT11B.1.6210.000089
ORF1ab/nsp31511L1511FttGttT11B.6.60.000889
ORF1ab/nsp31511L1511FttGttT11D.20.000075
ORF1ab/nsp31511L1511FttGttT11R.20.014493