CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1505S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31505L1505SL2323SnonsyntTatCa1781730.971917232-7234
ORF1ab/nsp31505L1505SL2323SnonsyntTAtCT17830.01685397232-7234
ORF1ab/nsp31505L1505SL2323SnonsyntTAtCC17810.005617987232-7234
ORF1ab/nsp31505L1505SL2323SnonsyntTAtCG17810.005617987232-7234

Details of the mutation L1505S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31505L1505StTatCa173178All0.000033
ORF1ab/nsp31505L1505StTAtCT3178All0.000001
ORF1ab/nsp31505L1505StTAtCC1178All0
ORF1ab/nsp31505L1505StTAtCG1178All0
ORF1ab/nsp31505L1505StTatCa159159AY.760.768116
ORF1ab/nsp31505L1505StTatCa23B.1.1.70.000002
ORF1ab/nsp31505L1505StTAtCC13B.1.1.70.000001
ORF1ab/nsp31505L1505StTatCa23B.1.617.20.000008
ORF1ab/nsp31505L1505StTAtCG13B.1.617.20.000004
ORF1ab/nsp31505L1505StTatCa22AY.1110.000366
ORF1ab/nsp31505L1505StTatCa22AY.390.000049
ORF1ab/nsp31505L1505StTatCa22AY.430.000009
ORF1ab/nsp31505L1505StTAtCT22AY.850.000854
ORF1ab/nsp31505L1505StTAtCT11AY.300.000396
ORF1ab/nsp31505L1505StTatCa11AY.440.000006
ORF1ab/nsp31505L1505StTatCa11B.10.000009
ORF1ab/nsp31505L1505StTatCa11B.1.177.810.000189
ORF1ab/nsp31505L1505StTatCa11B.1.6370.000073