CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1422L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31422L1422LL2240LsynCtaTta195610750.5495916983-6985
ORF1ab/nsp31422L1422LL2240LsynctActT19568210.4197346983-6985
ORF1ab/nsp31422L1422LL2240LsynctActG1956480.02453996983-6985
ORF1ab/nsp31422L1422LL2240LsynctActC1956110.005623726983-6985
ORF1ab/nsp31422L1422LL2240LsynCtATtG195610.0005112476983-6985

Details of the mutation L1422L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31422L1422LCtaTta10751956All0.000206
ORF1ab/nsp31422L1422LctActT8211956All0.000157
ORF1ab/nsp31422L1422LctActG481956All0.000009
ORF1ab/nsp31422L1422LctActC111956All0.000002
ORF1ab/nsp31422L1422LCtATtG11956All0
ORF1ab/nsp31422L1422LctActT721721B.1.1.4320.912658
ORF1ab/nsp31422L1422LCtaTta250265B.1.1.70.000224
ORF1ab/nsp31422L1422LctActT7265B.1.1.70.000006
ORF1ab/nsp31422L1422LctActG4265B.1.1.70.000004
ORF1ab/nsp31422L1422LctActC4265B.1.1.70.000004
ORF1ab/nsp31422L1422LCtaTta168168B.1.1.1960.96
ORF1ab/nsp31422L1422LCtaTta126127B.1.617.20.000474
ORF1ab/nsp31422L1422LctActG1127B.1.617.20.000004
ORF1ab/nsp31422L1422LctActT4767B.10.00043
ORF1ab/nsp31422L1422LCtaTta1867B.10.000165
ORF1ab/nsp31422L1422LctActC167B.10.000009
ORF1ab/nsp31422L1422LctActG167B.10.000009
ORF1ab/nsp31422L1422LCtaTta6063AY.40.000093
ORF1ab/nsp31422L1422LctActG263AY.40.000003
ORF1ab/nsp31422L1422LctActC163AY.40.000002
ORF1ab/nsp31422L1422LCtaTta6060P.1.140.002868
ORF1ab/nsp31422L1422LCtaTta5050AY.420.002012
ORF1ab/nsp31422L1422LCtaTta2143B.1.20.000185
ORF1ab/nsp31422L1422LctActT1643B.1.20.000141
ORF1ab/nsp31422L1422LctActG443B.1.20.000035
ORF1ab/nsp31422L1422LctActC243B.1.20.000018
ORF1ab/nsp31422L1422LCtaTta3134AY.430.000137
ORF1ab/nsp31422L1422LctActG234AY.430.000009
ORF1ab/nsp31422L1422LctActT134AY.430.000004
ORF1ab/nsp31422L1422LCtaTta2732B.1.1770.000356
ORF1ab/nsp31422L1422LctActT432B.1.1770.000053
ORF1ab/nsp31422L1422LctActG132B.1.1770.000013
ORF1ab/nsp31422L1422LCtaTta1730B.1.10.000308
ORF1ab/nsp31422L1422LctActT930B.1.10.000163
ORF1ab/nsp31422L1422LctActC230B.1.10.000036
ORF1ab/nsp31422L1422LctActG230B.1.10.000036
ORF1ab/nsp31422L1422LCtaTta1821AY.50.000372
ORF1ab/nsp31422L1422LctActG221AY.50.000041
ORF1ab/nsp31422L1422LctActT121AY.50.000021
ORF1ab/nsp31422L1422LCtaTta1718B.1.4290.0004
ORF1ab/nsp31422L1422LctActT118B.1.4290.000024
ORF1ab/nsp31422L1422LCtaTta1616AY.1030.000099
ORF1ab/nsp31422L1422LCtaTta1414AY.250.000084
ORF1ab/nsp31422L1422LCtaTta1114B.1.5960.000959
ORF1ab/nsp31422L1422LctActT314B.1.5960.000261
ORF1ab/nsp31422L1422LCtaTta1313B.1.1.4340.004531
ORF1ab/nsp31422L1422LCtaTta811AY.440.000049
ORF1ab/nsp31422L1422LctActG311AY.440.000018
ORF1ab/nsp31422L1422LCtaTta88AY.9.20.000294
ORF1ab/nsp31422L1422LCtaTta77B.1.429.10.084337
ORF1ab/nsp31422L1422LctActG36AY.260.000085
ORF1ab/nsp31422L1422LCtaTta26AY.260.000057
ORF1ab/nsp31422L1422LctActT16AY.260.000028
ORF1ab/nsp31422L1422LCtaTta66AY.980.000474
ORF1ab/nsp31422L1422LCtaTta66AY.99.20.000553
ORF1ab/nsp31422L1422LCtaTta350.166667
ORF1ab/nsp31422L1422LCtATtG150.055556
ORF1ab/nsp31422L1422LctActG150.055556
ORF1ab/nsp31422L1422LCtaTta55AY.1020.000133
ORF1ab/nsp31422L1422LCtaTta55AY.650.002665
ORF1ab/nsp31422L1422LCtaTta45B.1.1.100.004459
ORF1ab/nsp31422L1422LctActT15B.1.1.100.001115
ORF1ab/nsp31422L1422LCtaTta55B.1.110.30.003592
ORF1ab/nsp31422L1422LCtaTta45P.10.000063
ORF1ab/nsp31422L1422LctActG15P.10.000016
ORF1ab/nsp31422L1422LCtaTta34AY.30.00003
ORF1ab/nsp31422L1422LctActG14AY.30.00001
ORF1ab/nsp31422L1422LCtaTta44AY.470.000124
ORF1ab/nsp31422L1422LctActG44B.1.1600.000125
ORF1ab/nsp31422L1422LCtaTta33AY.1160.00086
ORF1ab/nsp31422L1422LCtaTta33AY.1190.000106
ORF1ab/nsp31422L1422LCtaTta23AY.230.000139
ORF1ab/nsp31422L1422LctActG13AY.230.00007
ORF1ab/nsp31422L1422LCtaTta33AY.290.000047
ORF1ab/nsp31422L1422LctActG23AY.4.20.000043
ORF1ab/nsp31422L1422LCtaTta13AY.4.20.000022
ORF1ab/nsp31422L1422LCtaTta23B.1.1.5190.000079
ORF1ab/nsp31422L1422LctActT13B.1.1.5190.00004
ORF1ab/nsp31422L1422LCtaTta33B.1.2210.000213
ORF1ab/nsp31422L1422LCtaTta33B.1.3690.000856
ORF1ab/nsp31422L1422LCtaTta33B.1.5250.000339
ORF1ab/nsp31422L1422LCtaTta33B.1.5610.001191
ORF1ab/nsp31422L1422LCtaTta33P.1.70.000958
ORF1ab/nsp31422L1422LCtaTta22A.2.5.20.003145
ORF1ab/nsp31422L1422LctActG12AY.10.000396
ORF1ab/nsp31422L1422LctActT12AY.10.000396
ORF1ab/nsp31422L1422LCtaTta22AY.100.00106
ORF1ab/nsp31422L1422LCtaTta22AY.200.000078
ORF1ab/nsp31422L1422LCtaTta22AY.29.10.000441
ORF1ab/nsp31422L1422LCtaTta22AY.5.30.000675
ORF1ab/nsp31422L1422LCtaTta22AY.5.40.000553
ORF1ab/nsp31422L1422LCtaTta22AY.98.10.000097
ORF1ab/nsp31422L1422LCtaTta22AY.99.10.003106
ORF1ab/nsp31422L1422LctActG12B.1.177.210.000076
ORF1ab/nsp31422L1422LCtaTta12B.1.177.210.000076
ORF1ab/nsp31422L1422LctActT12B.1.2340.000132
ORF1ab/nsp31422L1422LCtaTta12B.1.2340.000132
ORF1ab/nsp31422L1422LCtaTta22B.1.2400.000431
ORF1ab/nsp31422L1422LCtaTta22B.1.2580.000133
ORF1ab/nsp31422L1422LctActG12B.1.3510.00003
ORF1ab/nsp31422L1422LCtaTta12B.1.3510.00003
ORF1ab/nsp31422L1422LctActT12B.1.780.008547
ORF1ab/nsp31422L1422LctActG12B.1.780.008547
ORF1ab/nsp31422L1422LctActT22P.50.027397
ORF1ab/nsp31422L1422LCtaTta11A.23.10.000704
ORF1ab/nsp31422L1422LCtaTta11A.30.002096
ORF1ab/nsp31422L1422LCtaTta11AY.1060.000335
ORF1ab/nsp31422L1422LctActG11AY.1100.000113
ORF1ab/nsp31422L1422LctActC11AY.160.00038
ORF1ab/nsp31422L1422LctActG11AY.3.10.000085
ORF1ab/nsp31422L1422LCtaTta11AY.300.000396
ORF1ab/nsp31422L1422LctActG11AY.360.000148
ORF1ab/nsp31422L1422LCtaTta11AY.4.50.000107
ORF1ab/nsp31422L1422LCtaTta11AY.460.000104
ORF1ab/nsp31422L1422LCtaTta11AY.480.000465
ORF1ab/nsp31422L1422LCtaTta11AY.560.001605
ORF1ab/nsp31422L1422LCtaTta11AY.590.00053
ORF1ab/nsp31422L1422LCtaTta11AY.610.000105
ORF1ab/nsp31422L1422LCtaTta11AY.770.001127
ORF1ab/nsp31422L1422LCtaTta11AY.850.000427
ORF1ab/nsp31422L1422LCtaTta11B.1.1.10.000327
ORF1ab/nsp31422L1422LCtaTta11B.1.1.1640.005155
ORF1ab/nsp31422L1422LCtaTta11B.1.1.2220.000204
ORF1ab/nsp31422L1422LctActG11B.1.1.2700.010309
ORF1ab/nsp31422L1422LCtaTta11B.1.1.2790.001121
ORF1ab/nsp31422L1422LCtaTta11B.1.1.2840.000107
ORF1ab/nsp31422L1422LctActG11B.1.1.3010.001179
ORF1ab/nsp31422L1422LCtaTta11B.1.1.3170.000412
ORF1ab/nsp31422L1422LCtaTta11B.1.1.3180.000302
ORF1ab/nsp31422L1422LCtaTta11B.1.1.330.000421
ORF1ab/nsp31422L1422LCtaTta11B.1.1.3520.03125
ORF1ab/nsp31422L1422LCtaTta11B.1.1.390.00051
ORF1ab/nsp31422L1422LCtaTta11B.1.1.630.000386
ORF1ab/nsp31422L1422LctActT11B.1.1.890.006061
ORF1ab/nsp31422L1422LctActT11B.1.1390.000733
ORF1ab/nsp31422L1422LCtaTta11B.1.177.120.000152
ORF1ab/nsp31422L1422LCtaTta11B.1.177.150.000631
ORF1ab/nsp31422L1422LCtaTta11B.1.177.560.000668
ORF1ab/nsp31422L1422LCtaTta11B.1.177.810.000189
ORF1ab/nsp31422L1422LCtaTta11B.1.3240.001605
ORF1ab/nsp31422L1422LctActG11B.1.3610.001289
ORF1ab/nsp31422L1422LctActG11B.1.3770.004566
ORF1ab/nsp31422L1422LCtaTta11B.1.3960.000706
ORF1ab/nsp31422L1422LCtaTta11B.1.4150.014286
ORF1ab/nsp31422L1422LctActG11B.1.4160.001269
ORF1ab/nsp31422L1422LCtaTta11B.1.5260.000024
ORF1ab/nsp31422L1422LCtaTta11B.1.5750.000303
ORF1ab/nsp31422L1422LctActT11B.1.6090.000479
ORF1ab/nsp31422L1422LCtaTta11C.350.000774
ORF1ab/nsp31422L1422LctActG11C.370.000116
ORF1ab/nsp31422L1422LCtaTta11N.30.005814
ORF1ab/nsp31422L1422LCtaTta11P.1.150.000232
ORF1ab/nsp31422L1422LCtaTta11P.1.20.001156