CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1417R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31417L1417RL2235RnonsyncTacGa980.8888896968-6970
ORF1ab/nsp31417L1417RL2235RnonsyncTAcGC910.1111116968-6970

Details of the mutation L1417R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31417L1417RcTacGa89All0.000002
ORF1ab/nsp31417L1417RcTAcGC19All0
ORF1ab/nsp31417L1417RcTacGa33B.10.000027
ORF1ab/nsp31417L1417RcTacGa12A.2.40.003367
ORF1ab/nsp31417L1417RcTAcGC12A.2.40.003367
ORF1ab/nsp31417L1417RcTacGa11AY.430.000004
ORF1ab/nsp31417L1417RcTacGa11B.1.20.000009
ORF1ab/nsp31417L1417RcTacGa11B.1.6090.000479
ORF1ab/nsp31417L1417RcTacGa11D.20.000075