CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1417I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31417L1417IL2235InonsynCtaAta58560.9655176968-6970
ORF1ab/nsp31417L1417IL2235InonsynCtAAtT5810.01724146968-6970
ORF1ab/nsp31417L1417IL2235InonsynCtAAtC5810.01724146968-6970

Details of the mutation L1417I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31417L1417ICtaAta5658All0.000011
ORF1ab/nsp31417L1417ICtAAtC158All0
ORF1ab/nsp31417L1417ICtAAtT158All0
ORF1ab/nsp31417L1417ICtaAta1212AY.40.000019
ORF1ab/nsp31417L1417ICtaAta77AY.4.50.000752
ORF1ab/nsp31417L1417ICtaAta44B.1.1.70.000004
ORF1ab/nsp31417L1417ICtaAta33AY.440.000018
ORF1ab/nsp31417L1417ICtAAtT12AY.170.008197
ORF1ab/nsp31417L1417ICtaAta12AY.170.008197
ORF1ab/nsp31417L1417ICtaAta12AY.430.000004
ORF1ab/nsp31417L1417ICtAAtC12AY.430.000004
ORF1ab/nsp31417L1417ICtaAta22AY.580.001815
ORF1ab/nsp31417L1417ICtaAta22AY.80.001212
ORF1ab/nsp31417L1417ICtaAta22B.10.000018
ORF1ab/nsp31417L1417ICtaAta22B.1.1.1010.02
ORF1ab/nsp31417L1417ICtaAta22B.1.36.290.001035
ORF1ab/nsp31417L1417ICtaAta22B.1.4270.000101
ORF1ab/nsp31417L1417ICtaAta22B.1.438.10.000215
ORF1ab/nsp31417L1417ICtaAta11A.10.000282
ORF1ab/nsp31417L1417ICtaAta11AY.1200.000037
ORF1ab/nsp31417L1417ICtaAta11AY.130.000161
ORF1ab/nsp31417L1417ICtaAta11AY.230.00007
ORF1ab/nsp31417L1417ICtaAta11AY.250.000006
ORF1ab/nsp31417L1417ICtaAta11AY.590.00053
ORF1ab/nsp31417L1417ICtaAta11AY.90.000068
ORF1ab/nsp31417L1417ICtaAta11B0.000128
ORF1ab/nsp31417L1417ICtaAta11B.1.20.000009
ORF1ab/nsp31417L1417ICtaAta11B.1.3980.002976
ORF1ab/nsp31417L1417ICtaAta11B.1.4150.014286
ORF1ab/nsp31417L1417ICtaAta11B.1.617.10.000129
ORF1ab/nsp31417L1417ICtaAta11B.1.617.20.000004
ORF1ab/nsp31417L1417ICtaAta11Q.10.000126