CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1408del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31408L1408delL2226deldelCTG---25825816941-6943

Details of the mutation L1408del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31408L1408delCTG---258258All0.000049
ORF1ab/nsp31408L1408delCTG---7272B.1.1.70.000064
ORF1ab/nsp31408L1408delCTG---2222AY.40.000034
ORF1ab/nsp31408L1408delCTG---1515B.1.1770.000198
ORF1ab/nsp31408L1408delCTG---1313B.10.000119
ORF1ab/nsp31408L1408delCTG---1010B.1.20.000088
ORF1ab/nsp31408L1408delCTG---99B.1.621.10.004552
ORF1ab/nsp31408L1408delCTG---88AY.1030.00005
ORF1ab/nsp31408L1408delCTG---88B.1.10.000145
ORF1ab/nsp31408L1408delCTG---660.333333
ORF1ab/nsp31408L1408delCTG---66AY.430.000027
ORF1ab/nsp31408L1408delCTG---55B.1.2210.000355
ORF1ab/nsp31408L1408delCTG---44AY.200.000155
ORF1ab/nsp31408L1408delCTG---44AY.30.00004
ORF1ab/nsp31408L1408delCTG---44B.1.617.20.000015
ORF1ab/nsp31408L1408delCTG---33B.1.5960.000261
ORF1ab/nsp31408L1408delCTG---22AY.1190.000071
ORF1ab/nsp31408L1408delCTG---22AY.250.000012
ORF1ab/nsp31408L1408delCTG---22AY.4.50.000215
ORF1ab/nsp31408L1408delCTG---22B.1.177.40.000422
ORF1ab/nsp31408L1408delCTG---22B.1.2580.000133
ORF1ab/nsp31408L1408delCTG---22B.1.3110.000549
ORF1ab/nsp31408L1408delCTG---22B.1.5170.000854
ORF1ab/nsp31408L1408delCTG---22B.1.5250.000226
ORF1ab/nsp31408L1408delCTG---22P.10.000032
ORF1ab/nsp31408L1408delCTG---22U.30.007722
ORF1ab/nsp31408L1408delCTG---11A.2.40.003367
ORF1ab/nsp31408L1408delCTG---11A.280.002646
ORF1ab/nsp31408L1408delCTG---11AY.1100.000113
ORF1ab/nsp31408L1408delCTG---11AY.1200.000037
ORF1ab/nsp31408L1408delCTG---11AY.240.000431
ORF1ab/nsp31408L1408delCTG---11AY.260.000028
ORF1ab/nsp31408L1408delCTG---11AY.360.000148
ORF1ab/nsp31408L1408delCTG---11AY.470.000031
ORF1ab/nsp31408L1408delCTG---11AY.50.000021
ORF1ab/nsp31408L1408delCTG---11AY.610.000105
ORF1ab/nsp31408L1408delCTG---11AY.730.000665
ORF1ab/nsp31408L1408delCTG---11AY.840.000437
ORF1ab/nsp31408L1408delCTG---11AY.9.20.000037
ORF1ab/nsp31408L1408delCTG---11B.1.1.1920.002309
ORF1ab/nsp31408L1408delCTG---11B.1.1.2180.007692
ORF1ab/nsp31408L1408delCTG---11B.1.1.2360.006897
ORF1ab/nsp31408L1408delCTG---11B.1.1.3110.000358
ORF1ab/nsp31408L1408delCTG---11B.1.1.3120.001912
ORF1ab/nsp31408L1408delCTG---11B.1.1.3150.008475
ORF1ab/nsp31408L1408delCTG---11B.1.1.4090.002833
ORF1ab/nsp31408L1408delCTG---11B.1.1.700.000341
ORF1ab/nsp31408L1408delCTG---11B.1.160.230.004831
ORF1ab/nsp31408L1408delCTG---11B.1.160.70.002079
ORF1ab/nsp31408L1408delCTG---11B.1.177.150.000631
ORF1ab/nsp31408L1408delCTG---11B.1.177.180.00116
ORF1ab/nsp31408L1408delCTG---11B.1.177.190.001431
ORF1ab/nsp31408L1408delCTG---11B.1.177.210.000076
ORF1ab/nsp31408L1408delCTG---11B.1.177.540.000606
ORF1ab/nsp31408L1408delCTG---11B.1.177.560.000668
ORF1ab/nsp31408L1408delCTG---11B.1.177.570.000281
ORF1ab/nsp31408L1408delCTG---11B.1.177.60.000977
ORF1ab/nsp31408L1408delCTG---11B.1.177.620.001192
ORF1ab/nsp31408L1408delCTG---11B.1.177.680.015152
ORF1ab/nsp31408L1408delCTG---11B.1.177.810.000189
ORF1ab/nsp31408L1408delCTG---11B.1.177.870.000728
ORF1ab/nsp31408L1408delCTG---11B.1.177.90.001332
ORF1ab/nsp31408L1408delCTG---11B.1.258.100.011364
ORF1ab/nsp31408L1408delCTG---11B.1.3510.00003
ORF1ab/nsp31408L1408delCTG---11B.1.36.220.001208
ORF1ab/nsp31408L1408delCTG---11B.1.36.380.001642
ORF1ab/nsp31408L1408delCTG---11B.1.3890.001002
ORF1ab/nsp31408L1408delCTG---11B.1.4090.000781
ORF1ab/nsp31408L1408delCTG---11B.1.416.10.001563
ORF1ab/nsp31408L1408delCTG---11B.1.5750.000303
ORF1ab/nsp31408L1408delCTG---11B.1.6210.000089
ORF1ab/nsp31408L1408delCTG---11B.1.6300.005236
ORF1ab/nsp31408L1408delCTG---11B.1.6370.000073
ORF1ab/nsp31408L1408delCTG---11B.400.000364
ORF1ab/nsp31408L1408delCTG---11P.1.150.000232