CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1393P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31393L1393PL2211PnonsyncTacCa1390.6923086896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTAcCT1320.1538466896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTAcCC1310.07692316896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTAcCG1310.07692316896-6898

Details of the mutation L1393P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31393L1393PcTacCa913All0.000002
ORF1ab/nsp31393L1393PcTAcCT213All0
ORF1ab/nsp31393L1393PcTAcCG113All0
ORF1ab/nsp31393L1393PcTAcCC113All0
ORF1ab/nsp31393L1393PcTacCa45B.1.1.70.000004
ORF1ab/nsp31393L1393PcTAcCC15B.1.1.70.000001
ORF1ab/nsp31393L1393PcTAcCG130.055556
ORF1ab/nsp31393L1393PcTacCa130.055556
ORF1ab/nsp31393L1393PcTAcCT130.055556
ORF1ab/nsp31393L1393PcTacCa11AY.30.00001
ORF1ab/nsp31393L1393PcTacCa11B.1.1.3260.001761
ORF1ab/nsp31393L1393PcTacCa11B.1.1.3850.004464
ORF1ab/nsp31393L1393PcTacCa11B.1.1770.000013
ORF1ab/nsp31393L1393PcTAcCT11B.1.4150.014286