CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1393L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31393L1393LL2211LsynCtaTta10446103640.992156896-6898
ORF1ab/nsp31393L1393LL2211LsynctActG10446690.00660546896-6898
ORF1ab/nsp31393L1393LL2211LsynctActT1044680.0007658436896-6898
ORF1ab/nsp31393L1393LL2211LsynctActC1044640.0003829226896-6898
ORF1ab/nsp31393L1393LL2211LsynCtATtG1044610.00009573046896-6898

Details of the mutation L1393L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31393L1393LCtaTta1036410446All0.001982
ORF1ab/nsp31393L1393LctActG6910446All0.000013
ORF1ab/nsp31393L1393LctActT810446All0.000002
ORF1ab/nsp31393L1393LctActC410446All0.000001
ORF1ab/nsp31393L1393LCtATtG110446All0
ORF1ab/nsp31393L1393LCtaTta19431954B.1.1.70.001739
ORF1ab/nsp31393L1393LctActG61954B.1.1.70.000005
ORF1ab/nsp31393L1393LctActT41954B.1.1.70.000004
ORF1ab/nsp31393L1393LctActC11954B.1.1.70.000001
ORF1ab/nsp31393L1393LCtaTta14511451B.1.617.20.005464
ORF1ab/nsp31393L1393LCtaTta925926AY.1000.042556
ORF1ab/nsp31393L1393LctActG1926AY.1000.000046
ORF1ab/nsp31393L1393LCtaTta604611AY.40.00094
ORF1ab/nsp31393L1393LctActG5611AY.40.000008
ORF1ab/nsp31393L1393LctActT1611AY.40.000002
ORF1ab/nsp31393L1393LctActC1611AY.40.000002
ORF1ab/nsp31393L1393LCtaTta540540B.1.4040.703125
ORF1ab/nsp31393L1393LCtaTta490490B.1.1.700.167121
ORF1ab/nsp31393L1393LCtaTta337337B.1.177.100.295874
ORF1ab/nsp31393L1393LCtaTta320321B.1.20.002818
ORF1ab/nsp31393L1393LctActC1321B.1.20.000009
ORF1ab/nsp31393L1393LCtaTta215216AY.1030.001335
ORF1ab/nsp31393L1393LctActG1216AY.1030.000006
ORF1ab/nsp31393L1393LCtaTta204207B.1.1600.006362
ORF1ab/nsp31393L1393LctActG2207B.1.1600.000062
ORF1ab/nsp31393L1393LctActC1207B.1.1600.000031
ORF1ab/nsp31393L1393LCtaTta158158AY.440.000962
ORF1ab/nsp31393L1393LCtaTta153153B.1.5770.105155
ORF1ab/nsp31393L1393LCtaTta147147C.370.017061
ORF1ab/nsp31393L1393LCtaTta133140B.10.001218
ORF1ab/nsp31393L1393LctActG7140B.10.000064
ORF1ab/nsp31393L1393LCtaTta130133B.1.1770.001712
ORF1ab/nsp31393L1393LctActG3133B.1.1770.00004
ORF1ab/nsp31393L1393LCtaTta115116AY.430.00051
ORF1ab/nsp31393L1393LctActT1116AY.430.000004
ORF1ab/nsp31393L1393LCtaTta107108AY.30.001064
ORF1ab/nsp31393L1393LctActG1108AY.30.00001
ORF1ab/nsp31393L1393LCtaTta107107B.1.2580.007121
ORF1ab/nsp31393L1393LCtaTta104104B.1.2430.007237
ORF1ab/nsp31393L1393LCtaTta8387AY.250.000499
ORF1ab/nsp31393L1393LctActG387AY.250.000018
ORF1ab/nsp31393L1393LctActT187AY.250.000006
ORF1ab/nsp31393L1393LCtaTta8080B.1.1.1530.087623
ORF1ab/nsp31393L1393LCtaTta7676P.10.001197
ORF1ab/nsp31393L1393LCtaTta7172AY.390.001755
ORF1ab/nsp31393L1393LctActG172AY.390.000025
ORF1ab/nsp31393L1393LCtaTta7070AY.5.40.019369
ORF1ab/nsp31393L1393LCtaTta6970B.1.1.5190.00274
ORF1ab/nsp31393L1393LctActG170B.1.1.5190.00004
ORF1ab/nsp31393L1393LCtaTta6060AY.200.002332
ORF1ab/nsp31393L1393LCtaTta5555B.1.4270.002777
ORF1ab/nsp31393L1393LCtaTta4950B.1.3510.001457
ORF1ab/nsp31393L1393LCtATtG150B.1.3510.00003
ORF1ab/nsp31393L1393LCtaTta3248AY.4.20.000694
ORF1ab/nsp31393L1393LctActG1648AY.4.20.000347
ORF1ab/nsp31393L1393LCtaTta4545AY.99.20.004147
ORF1ab/nsp31393L1393LCtaTta4545B.1.5250.005092
ORF1ab/nsp31393L1393LCtaTta4344B.1.4290.001012
ORF1ab/nsp31393L1393LctActG144B.1.4290.000024
ORF1ab/nsp31393L1393LCtaTta3941AY.290.000615
ORF1ab/nsp31393L1393LctActG241AY.290.000032
ORF1ab/nsp31393L1393LCtaTta3839B.1.10.000689
ORF1ab/nsp31393L1393LctActG139B.1.10.000018
ORF1ab/nsp31393L1393LCtaTta3737AY.29.10.008159
ORF1ab/nsp31393L1393LCtaTta3232AY.1130.004556
ORF1ab/nsp31393L1393LCtaTta3030AY.1090.022189
ORF1ab/nsp31393L1393LCtaTta3030B.1.1.2280.091463
ORF1ab/nsp31393L1393LCtaTta2929B.1.621.10.014669
ORF1ab/nsp31393L1393LCtaTta2828B.1.214.10.56
ORF1ab/nsp31393L1393LCtaTta2728B.1.2210.001918
ORF1ab/nsp31393L1393LctActG128B.1.2210.000071
ORF1ab/nsp31393L1393LCtaTta2828B.1.6210.002479
ORF1ab/nsp31393L1393LCtaTta2727B.1.6260.154286
ORF1ab/nsp31393L1393LCtaTta2526AY.1170.002113
ORF1ab/nsp31393L1393LctActG126AY.1170.000085
ORF1ab/nsp31393L1393LCtaTta2626B.1.360.003793
ORF1ab/nsp31393L1393LCtaTta2525AY.1020.000663
ORF1ab/nsp31393L1393LCtaTta2323AY.1190.000812
ORF1ab/nsp31393L1393LCtaTta2323AY.50.000475
ORF1ab/nsp31393L1393LCtaTta2323AY.60.000946
ORF1ab/nsp31393L1393LCtaTta2222AY.9.20.000808
ORF1ab/nsp31393L1393LCtaTta2222B.1.177.810.004165
ORF1ab/nsp31393L1393LCtaTta2121B.1.177.210.001606
ORF1ab/nsp31393L1393LCtaTta1919AY.1110.00348
ORF1ab/nsp31393L1393LCtaTta1719AY.230.001186
ORF1ab/nsp31393L1393LctActG219AY.230.000139
ORF1ab/nsp31393L1393LCtaTta1919AY.330.001269
ORF1ab/nsp31393L1393LCtaTta1919B.1.1.2220.003876
ORF1ab/nsp31393L1393LCtaTta1818AY.39.10.000713
ORF1ab/nsp31393L1393LCtaTta1717AY.420.000684
ORF1ab/nsp31393L1393LCtaTta1717B.1.177.580.022636
ORF1ab/nsp31393L1393LCtaTta1717B.1.5260.0004
ORF1ab/nsp31393L1393LCtaTta1616P.1.140.000765
ORF1ab/nsp31393L1393LCtaTta1515AY.770.016911
ORF1ab/nsp31393L1393LCtaTta1515Q.80.002474
ORF1ab/nsp31393L1393LCtaTta1414AY.260.000396
ORF1ab/nsp31393L1393LCtaTta1414AY.5.30.004723
ORF1ab/nsp31393L1393LCtaTta1313B.1.177.170.010673
ORF1ab/nsp31393L1393LCtaTta1212B.1.5820.005888
ORF1ab/nsp31393L1393LCtaTta1111AY.710.005226
ORF1ab/nsp31393L1393LCtaTta1111B.1.1.1280.078014
ORF1ab/nsp31393L1393LCtaTta1111B.1.2340.001451
ORF1ab/nsp31393L1393LCtaTta1010AY.1200.000372
ORF1ab/nsp31393L1393LCtaTta910AY.3.10.000767
ORF1ab/nsp31393L1393LctActG110AY.3.10.000085
ORF1ab/nsp31393L1393LCtaTta1010AY.700.002085
ORF1ab/nsp31393L1393LCtaTta1010B.1.177.510.045662
ORF1ab/nsp31393L1393LCtaTta99AY.610.000943
ORF1ab/nsp31393L1393LCtaTta89B.1.1.2140.000444
ORF1ab/nsp31393L1393LctActG19B.1.1.2140.000055
ORF1ab/nsp31393L1393LCtaTta99B.1.4330.028754
ORF1ab/nsp31393L1393LCtaTta99P.1.150.002091
ORF1ab/nsp31393L1393LCtaTta99R.10.00081
ORF1ab/nsp31393L1393LCtaTta88AY.1180.000501
ORF1ab/nsp31393L1393LCtaTta88AY.450.000973
ORF1ab/nsp31393L1393LCtaTta88AY.460.000833
ORF1ab/nsp31393L1393LCtaTta88AY.790.009685
ORF1ab/nsp31393L1393LCtaTta88AY.980.000632
ORF1ab/nsp31393L1393LCtaTta88B.1.36.290.004139
ORF1ab/nsp31393L1393LCtaTta88B.1.5750.002427
ORF1ab/nsp31393L1393LCtaTta88P.1.100.002156
ORF1ab/nsp31393L1393LCtaTta88Q.30.00116
ORF1ab/nsp31393L1393LCtaTta77AY.1070.003262
ORF1ab/nsp31393L1393LCtaTta57D.20.000375
ORF1ab/nsp31393L1393LctActG27D.20.00015
ORF1ab/nsp31393L1393LCtaTta66AY.46.60.000433
ORF1ab/nsp31393L1393LCtaTta66AY.90.000406
ORF1ab/nsp31393L1393LCtaTta56B.1.1.3010.005896
ORF1ab/nsp31393L1393LctActG16B.1.1.3010.001179
ORF1ab/nsp31393L1393LCtaTta66B.1.5960.000523
ORF1ab/nsp31393L1393LCtaTta56B.1.617.10.000645
ORF1ab/nsp31393L1393LctActG16B.1.617.10.000129
ORF1ab/nsp31393L1393LCtaTta66C.350.004644
ORF1ab/nsp31393L1393LCtaTta55AY.1100.000563
ORF1ab/nsp31393L1393LCtaTta55AY.120.00158
ORF1ab/nsp31393L1393LCtaTta55AY.360.000741
ORF1ab/nsp31393L1393LCtaTta55B.1.1.2410.010352
ORF1ab/nsp31393L1393LCtaTta55B.1.1.2840.000537
ORF1ab/nsp31393L1393LCtaTta55B.1.1.3110.001791
ORF1ab/nsp31393L1393LCtaTta55B.1.160.140.010593
ORF1ab/nsp31393L1393LCtaTta55B.1.160.260.012107
ORF1ab/nsp31393L1393LCtaTta55B.1.3960.003529
ORF1ab/nsp31393L1393LCtaTta44AY.270.000259
ORF1ab/nsp31393L1393LCtaTta44AY.34.10.00204
ORF1ab/nsp31393L1393LCtaTta44AY.350.000932
ORF1ab/nsp31393L1393LctActG34AY.470.000093
ORF1ab/nsp31393L1393LCtaTta14AY.470.000031
ORF1ab/nsp31393L1393LCtaTta44AY.70.000784
ORF1ab/nsp31393L1393LCtaTta44AY.740.000463
ORF1ab/nsp31393L1393LCtaTta44B.1.110.30.002874
ORF1ab/nsp31393L1393LCtaTta44B.1.177.40.000844
ORF1ab/nsp31393L1393LCtaTta44B.1.2060.003263
ORF1ab/nsp31393L1393LCtaTta44B.1.2390.004884
ORF1ab/nsp31393L1393LCtaTta44B.1.36.170.001976
ORF1ab/nsp31393L1393LCtaTta44B.1.5230.009804
ORF1ab/nsp31393L1393LCtaTta44B.1.5880.00364
ORF1ab/nsp31393L1393LCtaTta44B.1.5950.001044
ORF1ab/nsp31393L1393LCtaTta44B.320.108108
ORF1ab/nsp31393L1393LCtaTta44Q.40.001819
ORF1ab/nsp31393L1393LCtaTta33AY.10.001187
ORF1ab/nsp31393L1393LCtaTta33AY.240.001293
ORF1ab/nsp31393L1393LCtaTta33AY.320.001597
ORF1ab/nsp31393L1393LCtaTta33AY.340.000291
ORF1ab/nsp31393L1393LCtaTta33AY.730.001996
ORF1ab/nsp31393L1393LCtaTta33AY.750.000168
ORF1ab/nsp31393L1393LCtaTta33AY.860.00249
ORF1ab/nsp31393L1393LCtaTta33AY.9.10.000251
ORF1ab/nsp31393L1393LCtaTta33AY.98.10.000145
ORF1ab/nsp31393L1393LCtaTta33B.1.1.1590.014019
ORF1ab/nsp31393L1393LCtaTta33B.1.1.1610.010601
ORF1ab/nsp31393L1393LCtaTta33B.1.1.2740.015152
ORF1ab/nsp31393L1393LCtaTta33B.1.1.280.000934
ORF1ab/nsp31393L1393LCtaTta33B.1.1.2970.006711
ORF1ab/nsp31393L1393LCtaTta33B.1.1.3060.001315
ORF1ab/nsp31393L1393LCtaTta33B.1.1.3170.001235
ORF1ab/nsp31393L1393LCtaTta33B.1.1.3970.006757
ORF1ab/nsp31393L1393LCtaTta33B.1.1.4340.001046
ORF1ab/nsp31393L1393LCtaTta33B.1.1.5260.010638
ORF1ab/nsp31393L1393LCtaTta33B.1.160.160.002788
ORF1ab/nsp31393L1393LCtaTta33B.1.160.80.003866
ORF1ab/nsp31393L1393LCtaTta33B.1.177.860.00055
ORF1ab/nsp31393L1393LCtaTta33B.1.258.170.000312
ORF1ab/nsp31393L1393LCtaTta33B.1.3290.001823
ORF1ab/nsp31393L1393LCtaTta33B.1.351.20.000908
ORF1ab/nsp31393L1393LCtaTta33B.1.4680.017143
ORF1ab/nsp31393L1393LCtaTta33B.1.5170.001281
ORF1ab/nsp31393L1393LCtaTta33B.1.5560.022556
ORF1ab/nsp31393L1393LCtaTta33B.1.6090.001438
ORF1ab/nsp31393L1393LCtaTta33B.1.6370.000219
ORF1ab/nsp31393L1393LCtaTta23P.20.000373
ORF1ab/nsp31393L1393LctActG13P.20.000187
ORF1ab/nsp31393L1393LCtaTta33Q.20.00184
ORF1ab/nsp31393L1393LctActG120.055556
ORF1ab/nsp31393L1393LctActT120.055556
ORF1ab/nsp31393L1393LCtaTta22A.2.50.000998
ORF1ab/nsp31393L1393LCtaTta22A.23.10.001408
ORF1ab/nsp31393L1393LCtaTta22AM.40.007143
ORF1ab/nsp31393L1393LCtaTta22AP.10.003003
ORF1ab/nsp31393L1393LCtaTta22AY.1060.00067
ORF1ab/nsp31393L1393LCtaTta22AY.130.000322
ORF1ab/nsp31393L1393LCtaTta22AY.300.000791
ORF1ab/nsp31393L1393LCtaTta22AY.410.000588
ORF1ab/nsp31393L1393LCtaTta22AY.620.000871
ORF1ab/nsp31393L1393LCtaTta22AY.7.10.000225
ORF1ab/nsp31393L1393LCtaTta22AY.75.10.000361
ORF1ab/nsp31393L1393LCtaTta22AY.840.000875
ORF1ab/nsp31393L1393LCtaTta22AY.850.000854
ORF1ab/nsp31393L1393LCtaTta22AY.990.002099
ORF1ab/nsp31393L1393LCtaTta22B.1.1.10.000653
ORF1ab/nsp31393L1393LCtaTta22B.1.1.2160.001781
ORF1ab/nsp31393L1393LCtaTta22B.1.1.4660.017391
ORF1ab/nsp31393L1393LCtaTta22B.1.1.4870.011173
ORF1ab/nsp31393L1393LCtaTta22B.1.1.510.003436
ORF1ab/nsp31393L1393LCtaTta22B.1.177.50.002484
ORF1ab/nsp31393L1393LCtaTta22B.1.177.600.000437
ORF1ab/nsp31393L1393LCtaTta22B.1.2410.001623
ORF1ab/nsp31393L1393LCtaTta22B.1.3110.000549
ORF1ab/nsp31393L1393LCtaTta22B.1.3380.017241
ORF1ab/nsp31393L1393LCtaTta12B.1.3490.000715
ORF1ab/nsp31393L1393LctActG12B.1.3490.000715
ORF1ab/nsp31393L1393LCtaTta22B.1.36.220.002415
ORF1ab/nsp31393L1393LCtaTta22B.1.36.80.002
ORF1ab/nsp31393L1393LCtaTta22B.1.3890.002004
ORF1ab/nsp31393L1393LCtaTta22B.1.438.10.000215
ORF1ab/nsp31393L1393LctActG12B.1.5610.000397
ORF1ab/nsp31393L1393LCtaTta12B.1.5610.000397
ORF1ab/nsp31393L1393LCtaTta22B.1.5680.002222
ORF1ab/nsp31393L1393LCtaTta22B.1.6120.005305
ORF1ab/nsp31393L1393LCtaTta22B.1.6190.001742
ORF1ab/nsp31393L1393LCtaTta22B.610.011494
ORF1ab/nsp31393L1393LCtaTta22C.110.021277
ORF1ab/nsp31393L1393LCtaTta22C.37.10.005236
ORF1ab/nsp31393L1393LCtaTta22N.50.003534
ORF1ab/nsp31393L1393LCtaTta22P.1.40.001953
ORF1ab/nsp31393L1393LCtaTta11A.10.000282
ORF1ab/nsp31393L1393LCtaTta11A.2.40.003367
ORF1ab/nsp31393L1393LCtaTta11AL.10.012987
ORF1ab/nsp31393L1393LCtaTta11AY.1010.00049
ORF1ab/nsp31393L1393LCtaTta11AY.1050.000643
ORF1ab/nsp31393L1393LCtaTta11AY.1140.000231
ORF1ab/nsp31393L1393LCtaTta11AY.1160.000287
ORF1ab/nsp31393L1393LCtaTta11AY.1210.000135
ORF1ab/nsp31393L1393LCtaTta11AY.16.10.00047
ORF1ab/nsp31393L1393LCtaTta11AY.370.000316
ORF1ab/nsp31393L1393LCtaTta11AY.4.50.000107
ORF1ab/nsp31393L1393LCtaTta11AY.46.10.001027
ORF1ab/nsp31393L1393LCtaTta11AY.46.40.000165
ORF1ab/nsp31393L1393LCtaTta11AY.530.000288
ORF1ab/nsp31393L1393LCtaTta11AY.550.000917
ORF1ab/nsp31393L1393LCtaTta11AY.590.00053
ORF1ab/nsp31393L1393LCtaTta11AY.640.000595
ORF1ab/nsp31393L1393LCtaTta11AY.650.000533
ORF1ab/nsp31393L1393LCtaTta11AY.660.00107
ORF1ab/nsp31393L1393LCtaTta11AY.670.000464
ORF1ab/nsp31393L1393LCtaTta11AY.680.000274
ORF1ab/nsp31393L1393LCtaTta11AY.880.000884
ORF1ab/nsp31393L1393LCtaTta11AY.970.001701
ORF1ab/nsp31393L1393LCtaTta11B.1.1.100.001115
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1010.01
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1290.009174
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1410.002012
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1700.001247
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1870.00885
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1920.002309
ORF1ab/nsp31393L1393LCtaTta11B.1.1.2580.003257
ORF1ab/nsp31393L1393LCtaTta11B.1.1.2770.000759
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3180.000302
ORF1ab/nsp31393L1393LCtaTta11B.1.1.330.000421
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3520.03125
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3690.000446
ORF1ab/nsp31393L1393LctActG11B.1.1.3720.000689
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3810.04
ORF1ab/nsp31393L1393LCtaTta11B.1.1.4090.002833
ORF1ab/nsp31393L1393LCtaTta11B.1.1260.001276
ORF1ab/nsp31393L1393LCtaTta11B.1.1460.004237
ORF1ab/nsp31393L1393LCtaTta11B.1.160.220.006757
ORF1ab/nsp31393L1393LCtaTta11B.1.160.320.004292
ORF1ab/nsp31393L1393LCtaTta11B.1.1620.005025
ORF1ab/nsp31393L1393LCtaTta11B.1.177.180.00116
ORF1ab/nsp31393L1393LCtaTta11B.1.177.430.001477
ORF1ab/nsp31393L1393LCtaTta11B.1.177.440.000519
ORF1ab/nsp31393L1393LCtaTta11B.1.177.480.003125
ORF1ab/nsp31393L1393LCtaTta11B.1.177.520.001757
ORF1ab/nsp31393L1393LCtaTta11B.1.177.570.000281
ORF1ab/nsp31393L1393LCtaTta11B.1.177.690.001484
ORF1ab/nsp31393L1393LCtaTta11B.1.177.750.001041
ORF1ab/nsp31393L1393LCtaTta11B.1.177.820.000477
ORF1ab/nsp31393L1393LCtaTta11B.1.177.90.001332
ORF1ab/nsp31393L1393LCtaTta11B.1.214.30.007143
ORF1ab/nsp31393L1393LCtaTta11B.1.221.10.002907
ORF1ab/nsp31393L1393LCtaTta11B.1.2230.002778
ORF1ab/nsp31393L1393LCtaTta11B.1.2310.032258
ORF1ab/nsp31393L1393LCtaTta11B.1.2400.000216
ORF1ab/nsp31393L1393LCtaTta11B.1.258.190.007092
ORF1ab/nsp31393L1393LCtaTta11B.1.2650.001271
ORF1ab/nsp31393L1393LCtaTta11B.1.3250.006897
ORF1ab/nsp31393L1393LCtaTta11B.1.3360.002439
ORF1ab/nsp31393L1393LCtaTta11B.1.36.360.000602
ORF1ab/nsp31393L1393LCtaTta11B.1.36.380.001642
ORF1ab/nsp31393L1393LCtaTta11B.1.3610.001289
ORF1ab/nsp31393L1393LCtaTta11B.1.3670.000792
ORF1ab/nsp31393L1393LCtaTta11B.1.3690.000285
ORF1ab/nsp31393L1393LCtaTta11B.1.3710.001122
ORF1ab/nsp31393L1393LCtaTta11B.1.3780.006849
ORF1ab/nsp31393L1393LCtaTta11B.1.390.003906
ORF1ab/nsp31393L1393LCtaTta11B.1.3910.001127
ORF1ab/nsp31393L1393LCtaTta11B.1.3970.004854
ORF1ab/nsp31393L1393LCtaTta11B.1.415.10.007576
ORF1ab/nsp31393L1393LCtaTta11B.1.4160.001269
ORF1ab/nsp31393L1393LCtaTta11B.1.4390.005917
ORF1ab/nsp31393L1393LCtaTta11B.1.4530.003236
ORF1ab/nsp31393L1393LCtaTta11B.1.4600.017857
ORF1ab/nsp31393L1393LCtaTta11B.1.4990.00105
ORF1ab/nsp31393L1393LCtaTta11B.1.5270.003704
ORF1ab/nsp31393L1393LCtaTta11B.1.5300.007143
ORF1ab/nsp31393L1393LCtaTta11B.1.5650.00081
ORF1ab/nsp31393L1393LCtaTta11B.1.5670.003333
ORF1ab/nsp31393L1393LCtaTta11B.1.5760.000907
ORF1ab/nsp31393L1393LCtaTta11B.1.5800.004065
ORF1ab/nsp31393L1393LCtaTta11B.1.6060.006024
ORF1ab/nsp31393L1393LCtaTta11B.1.6230.000536
ORF1ab/nsp31393L1393LCtaTta11B.1.80.001972
ORF1ab/nsp31393L1393LCtaTta11B.1.810.021277
ORF1ab/nsp31393L1393LCtaTta11B.1.9.50.005682
ORF1ab/nsp31393L1393LCtaTta11B.230.002924
ORF1ab/nsp31393L1393LCtaTta11B.60.00091
ORF1ab/nsp31393L1393LCtaTta11C.260.007353
ORF1ab/nsp31393L1393LCtaTta11C.360.000911
ORF1ab/nsp31393L1393LCtaTta11C.36.30.000567
ORF1ab/nsp31393L1393LCtaTta11P.1.120.000484
ORF1ab/nsp31393L1393LCtaTta11P.1.170.000162
ORF1ab/nsp31393L1393LCtaTta11P.1.70.000319

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.