CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1299R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31299L1299RL2117RnonsynTTaAGa210.56614-6616
ORF1ab/nsp31299L1299RL2117RnonsynTTAAGG210.56614-6616

Details of the mutation L1299R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31299L1299RTTaAGa120.055556
ORF1ab/nsp31299L1299RTTAAGG120.055556
ORF1ab/nsp31299L1299RTTaAGa12All0
ORF1ab/nsp31299L1299RTTAAGG12All0