CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1287I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31287L1287IL2105InonsynCttAtt42400.9523816578-6580
ORF1ab/nsp31287L1287IL2105InonsynCtTAtA4220.0476196578-6580

Details of the mutation L1287I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31287L1287ICttAtt4042All0.000008
ORF1ab/nsp31287L1287ICtTAtA242All0
ORF1ab/nsp31287L1287ICttAtt66AY.610.000629
ORF1ab/nsp31287L1287ICttAtt44B.1.1.5190.000159
ORF1ab/nsp31287L1287ICttAtt44B.1.1.70.000004
ORF1ab/nsp31287L1287ICttAtt33AY.60.000123
ORF1ab/nsp31287L1287ICtTAtA220.111111
ORF1ab/nsp31287L1287ICttAtt22AY.1030.000012
ORF1ab/nsp31287L1287ICttAtt22AY.40.000003
ORF1ab/nsp31287L1287ICttAtt22B.1.1.10.000653
ORF1ab/nsp31287L1287ICttAtt22B.1.1.3480.001592
ORF1ab/nsp31287L1287ICttAtt22B.1.5250.000226
ORF1ab/nsp31287L1287ICttAtt11A0.000387
ORF1ab/nsp31287L1287ICttAtt11AY.1020.000027
ORF1ab/nsp31287L1287ICttAtt11AY.30.00001
ORF1ab/nsp31287L1287ICttAtt11AY.46.60.000072
ORF1ab/nsp31287L1287ICttAtt11AY.75.10.00018
ORF1ab/nsp31287L1287ICttAtt11AY.90.000068
ORF1ab/nsp31287L1287ICttAtt11B0.000128
ORF1ab/nsp31287L1287ICttAtt11B.10.000009
ORF1ab/nsp31287L1287ICttAtt11B.1.10.000018
ORF1ab/nsp31287L1287ICttAtt11B.1.1.630.000386
ORF1ab/nsp31287L1287ICttAtt11B.1.351.30.000876
ORF1ab/nsp31287L1287ICttAtt11B.1.438.10.000107
ORF1ab/nsp31287L1287ICttAtt11B.1.4710.002732