CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1244del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31244L1244del1L2062del1delCtt-tt1060.66449-6451
ORF1ab/nsp31244L1244del1L2062del1delcTtc-t1030.36449-6451
ORF1ab/nsp31244L1244del1L2062del1delCtT-tC1010.16449-6451

Details of the mutation L1244del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31244L1244del1Ctt-tt610All0.000001
ORF1ab/nsp31244L1244del1cTtc-t310All0.000001
ORF1ab/nsp31244L1244del1CtT-tC110All0
ORF1ab/nsp31244L1244del1Ctt-tt13B.1.20.000009
ORF1ab/nsp31244L1244del1CtT-tC13B.1.20.000009
ORF1ab/nsp31244L1244del1cTtc-t13B.1.20.000009
ORF1ab/nsp31244L1244del1Ctt-tt22B.1.6270.00404
ORF1ab/nsp31244L1244del1Ctt-tt11AY.350.000233
ORF1ab/nsp31244L1244del1Ctt-tt11AY.610.000105
ORF1ab/nsp31244L1244del1Ctt-tt11AY.75.10.00018
ORF1ab/nsp31244L1244del1cTtc-t11B.1.2340.000132
ORF1ab/nsp31244L1244del1cTtc-t11B.1.617.20.000004