CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1226 | L1226L | L2044L | syn | Cta | Tta | 4085 | 3999 | 0.978947 | 6395-6397 |
ORF1ab/nsp3 | 1226 | L1226L | L2044L | syn | ctA | ctT | 4085 | 50 | 0.0122399 | 6395-6397 |
ORF1ab/nsp3 | 1226 | L1226L | L2044L | syn | ctA | ctG | 4085 | 28 | 0.00685435 | 6395-6397 |
ORF1ab/nsp3 | 1226 | L1226L | L2044L | syn | ctA | ctC | 4085 | 8 | 0.00195838 | 6395-6397 |
Details of the mutation L1226L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3999 | 4085 | All | 0.000765 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 50 | 4085 | All | 0.00001 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 28 | 4085 | All | 0.000005 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctC | 8 | 4085 | All | 0.000002 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 741 | 758 | AY.4 | 0.001153 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 14 | 758 | AY.4 | 0.000022 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 3 | 758 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 622 | 622 | Q.1 | 0.078575 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 611 | 616 | B.1.1.7 | 0.000547 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 3 | 616 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 2 | 616 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 438 | 438 | AY.25 | 0.002634 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 326 | 326 | B.1.1.4 | 0.970238 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 131 | 132 | B.1.2 | 0.001154 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 132 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 84 | 88 | B.1.617.2 | 0.000316 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 2 | 88 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 2 | 88 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 73 | 74 | AY.43 | 0.000323 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 74 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 72 | 72 | AY.44 | 0.000438 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 65 | 65 | AY.3 | 0.000647 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 63 | 64 | B.1 | 0.000577 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 64 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 60 | 60 | AY.42 | 0.002414 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 52 | 52 | B.1.1.467 | 1 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 44 | 44 | AY.39 | 0.001087 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 43 | 44 | B.1.1 | 0.00078 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 44 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 40 | 40 | B.1.177.62 | 0.047676 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 36 | 36 | B.1.258.17 | 0.003743 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 28 | 28 | AY.98.1 | 0.001356 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 27 | 27 | AC.1 | 1 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 25 | 25 | B.1.265 | 0.031766 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 23 | 23 | AY.75 | 0.001289 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 21 | 21 | B.1.221 | 0.001492 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 19 | 20 | C.36 | 0.017304 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 20 | C.36 | 0.000911 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 16 | 16 | B.1.409 | 0.0125 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 14 | 14 | P.1 | 0.000221 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 12 | 13 | AY.102 | 0.000318 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 13 | AY.102 | 0.000027 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 13 | 13 | AY.103 | 0.000081 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 13 | 13 | AY.29 | 0.000205 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 10 | 12 | AY.120 | 0.000372 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 2 | 12 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 6 | 12 | B.1.160 | 0.000187 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 6 | 12 | B.1.160 | 0.000187 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 10 | 11 | B.1.351 | 0.000297 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 1 | 11 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 10 | 11 | D.2 | 0.00075 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctC | 1 | 11 | D.2 | 0.000075 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 10 | 10 | B.1.1.405 | 0.833333 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 10 | 10 | B.1.177 | 0.000132 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 10 | 10 | B.1.429 | 0.000235 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 9 | 9 | AY.26 | 0.000255 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 7 | 8 | B.1.1.519 | 0.000278 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 8 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 7 | 7 | B.1.324 | 0.011236 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 7 | 7 | B.1.427 | 0.000353 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 4 | 7 | P.1.14 | 0.000191 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 7 | P.1.14 | 0.000143 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 6 | 6 | AY.49 | 0.019169 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 5 | 5 | P.1.16 | 0.001871 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | AY.46.5 | 0.000794 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | B.1.1.306 | 0.001754 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | B.1.177.82 | 0.001909 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctC | 4 | 4 | B.6.4 | 0.181818 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | AY.46.3 | 0.002801 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | AY.74 | 0.000347 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B | 0.000383 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.1.1.192 | 0.006928 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 3 | B.1.1.214 | 0.000111 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 3 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.1.1.222 | 0.000612 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.1.1.311 | 0.001074 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.1.1.37 | 0.000579 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.1.399 | 0.005803 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | B.40 | 0.001093 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | P.1.1 | 0.000953 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 2 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 1 | 2 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 1 | 2 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 2 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.1.417 | 0.005405 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.212 | 0.033333 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.237 | 0.00995 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.480 | 0.004975 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctC | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctC | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 2 | 2 | L.3 | 0.007092 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctT | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AE.3 | 0.032258 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp3 | 1226 | L1226L | ctA | ctG | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.132 | 0.014925 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.391 | 0.008547 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | B.4.1 | 0.018868 |
ORF1ab/nsp3 | 1226 | L1226L | Cta | Tta | 1 | 1 | P.1.7 | 0.000319 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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