CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = L1195L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31195L1195LL2013LsynctTctG2641380.5227276302-6304
ORF1ab/nsp31195L1195LL2013LsynctTctC2641080.4090916302-6304
ORF1ab/nsp31195L1195LL2013LsynctTctA264170.06439396302-6304
ORF1ab/nsp31195L1195LL2013LsynCtTTtG26410.003787886302-6304

Details of the mutation L1195L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31195L1195LctTctG138264All0.000026
ORF1ab/nsp31195L1195LctTctC108264All0.000021
ORF1ab/nsp31195L1195LctTctA17264All0.000003
ORF1ab/nsp31195L1195LCtTTtG1264All0
ORF1ab/nsp31195L1195LctTctG8484B.1.1.4400.988235
ORF1ab/nsp31195L1195LctTctG2837B.1.1.70.000025
ORF1ab/nsp31195L1195LctTctC937B.1.1.70.000008
ORF1ab/nsp31195L1195LctTctC2222P.10.000347
ORF1ab/nsp31195L1195LctTctC1818AY.230.001255
ORF1ab/nsp31195L1195LctTctG1518B.10.000137
ORF1ab/nsp31195L1195LctTctC118B.10.000009
ORF1ab/nsp31195L1195LctTctA118B.10.000009
ORF1ab/nsp31195L1195LCtTTtG118B.10.000009
ORF1ab/nsp31195L1195LctTctC1111B.1.177.600.002403
ORF1ab/nsp31195L1195LctTctC88AY.430.000035
ORF1ab/nsp31195L1195LctTctC78B.1.617.20.000026
ORF1ab/nsp31195L1195LctTctA18B.1.617.20.000004
ORF1ab/nsp31195L1195LctTctC66AY.440.000037
ORF1ab/nsp31195L1195LctTctC35AY.40.000005
ORF1ab/nsp31195L1195LctTctA15AY.40.000002
ORF1ab/nsp31195L1195LctTctG15AY.40.000002
ORF1ab/nsp31195L1195LctTctG45B.1.10.000073
ORF1ab/nsp31195L1195LctTctC15B.1.10.000018
ORF1ab/nsp31195L1195LctTctG35B.1.20.000026
ORF1ab/nsp31195L1195LctTctC25B.1.20.000018
ORF1ab/nsp31195L1195LctTctA55B.1.258.110.001982
ORF1ab/nsp31195L1195LctTctC44AY.390.000099
ORF1ab/nsp31195L1195LctTctC33AY.200.000117
ORF1ab/nsp31195L1195LctTctA33AY.420.000121
ORF1ab/nsp31195L1195LctTctC33AY.930.000819
ORF1ab/nsp31195L1195LctTctC12AY.250.000006
ORF1ab/nsp31195L1195LctTctG12AY.250.000006
ORF1ab/nsp31195L1195LctTctA22P.30.00319
ORF1ab/nsp31195L1195LctTctC11AY.1020.000027
ORF1ab/nsp31195L1195LctTctC11AY.1030.000006
ORF1ab/nsp31195L1195LctTctC11AY.360.000148
ORF1ab/nsp31195L1195LctTctC11AY.460.000104
ORF1ab/nsp31195L1195LctTctA11AY.46.20.000635
ORF1ab/nsp31195L1195LctTctC11AY.46.60.000072
ORF1ab/nsp31195L1195LctTctC11B0.000128
ORF1ab/nsp31195L1195LctTctC11B.1.1.3110.000358
ORF1ab/nsp31195L1195LctTctC11B.1.1.5210.005348
ORF1ab/nsp31195L1195LctTctC11B.1.1770.000013
ORF1ab/nsp31195L1195LctTctG11B.1.177.210.000076
ORF1ab/nsp31195L1195LctTctG11B.1.2060.000816
ORF1ab/nsp31195L1195LctTctA11B.1.3510.00003
ORF1ab/nsp31195L1195LctTctA11B.1.4290.000024
ORF1ab/nsp31195L1195LctTctA11B.1.6210.000089