CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = I1683T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31683I1683TI2501TnonsynaTcaCc33215332100.9998497766-7768
ORF1ab/nsp31683I1683TI2501TnonsynaTCaCT3321550.0001505347766-7768

Details of the mutation I1683T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31683I1683TaTcaCc3321033215All0.006352
ORF1ab/nsp31683I1683TaTCaCT533215All0.000001
ORF1ab/nsp31683I1683TaTcaCc1464714648B.1.2580.974712
ORF1ab/nsp31683I1683TaTCaCT114648B.1.2580.000067
ORF1ab/nsp31683I1683TaTcaCc94279429B.1.258.170.980141
ORF1ab/nsp31683I1683TaTCaCT29429B.1.258.170.000208
ORF1ab/nsp31683I1683TaTcaCc24782478B.1.258.110.982164
ORF1ab/nsp31683I1683TaTcaCc994994B.1.258.140.97451
ORF1ab/nsp31683I1683TaTcaCc610610B.1.258.160.998363
ORF1ab/nsp31683I1683TaTcaCc579579B.1.258.30.969849
ORF1ab/nsp31683I1683TaTcaCc506506B.1.258.70.967495
ORF1ab/nsp31683I1683TaTcaCc365365B.1.258.220.973333
ORF1ab/nsp31683I1683TaTcaCc336336B.1.5700.988235
ORF1ab/nsp31683I1683TaTcaCc314314B.10.002876
ORF1ab/nsp31683I1683TaTcaCc282282B.1.258.40.972414
ORF1ab/nsp31683I1683TaTcaCc221221B.1.258.20.995495
ORF1ab/nsp31683I1683TaTcaCc200200B.1.258.91
ORF1ab/nsp31683I1683TaTcaCc152152AY.240.065517
ORF1ab/nsp31683I1683TaTcaCc141141B.1.258.191
ORF1ab/nsp31683I1683TaTcaCc127127B.1.258.210.984496
ORF1ab/nsp31683I1683TaTcaCc122122B.1.258.120.96063
ORF1ab/nsp31683I1683TaTcaCc105105AY.1030.000652
ORF1ab/nsp31683I1683TaTcaCc100100B.1.258.50.877193
ORF1ab/nsp31683I1683TaTcaCc9393B.1.258.241
ORF1ab/nsp31683I1683TaTcaCc8787B.1.258.100.988636
ORF1ab/nsp31683I1683TaTcaCc7171AY.440.000432
ORF1ab/nsp31683I1683TaTcaCc6969B.1.1.70.000062
ORF1ab/nsp31683I1683TaTcaCc6363B.1.258.201
ORF1ab/nsp31683I1683TaTcaCc5353B.1.258.151
ORF1ab/nsp31683I1683TaTcaCc4949B.1.258.60.960784
ORF1ab/nsp31683I1683TaTcaCc4848B.1.1600.001497
ORF1ab/nsp31683I1683TaTcaCc4848B.1.20.000423
ORF1ab/nsp31683I1683TaTcaCc4747B.1.1.3040.132022
ORF1ab/nsp31683I1683TaTcaCc4444AY.250.000265
ORF1ab/nsp31683I1683TaTcaCc4444B.1.1770.000579
ORF1ab/nsp31683I1683TaTcaCc4444B.1.5750.01335
ORF1ab/nsp31683I1683TaTcaCc4343B.1.10.00078
ORF1ab/nsp31683I1683TaTcaCc4242B.1.258.231
ORF1ab/nsp31683I1683TaTcaCc4141B.1.617.20.000154
ORF1ab/nsp31683I1683TaTcaCc3131AY.30.000308
ORF1ab/nsp31683I1683TaTcaCc3030P.10.000473
ORF1ab/nsp31683I1683TaTcaCc2929B.1.6090.013902
ORF1ab/nsp31683I1683TaTcaCc2828AY.40.000044
ORF1ab/nsp31683I1683TaTcaCc2424B.1.1.700.008186
ORF1ab/nsp31683I1683TaTcaCc2323AY.920.006607
ORF1ab/nsp31683I1683TaTcaCc2323G.10.958333
ORF1ab/nsp31683I1683TaTcaCc1717B.1.1870.566667
ORF1ab/nsp31683I1683TaTcaCc1414AY.430.000062
ORF1ab/nsp31683I1683TaTcaCc1414B.1.36.270.010687
ORF1ab/nsp31683I1683TaTcaCc1313AY.610.001362
ORF1ab/nsp31683I1683TaTcaCc1212B.1.1.2140.000665
ORF1ab/nsp31683I1683TaTcaCc1212B.1.1.670.054795
ORF1ab/nsp31683I1683TaTcaCc1212B.1.2210.000852
ORF1ab/nsp31683I1683TaTcaCc1111AY.470.000342
ORF1ab/nsp31683I1683TaTcaCc1111B0.001406
ORF1ab/nsp31683I1683TaTcaCc1010AY.460.001041
ORF1ab/nsp31683I1683TaTcaCc1010B.1.258.181
ORF1ab/nsp31683I1683TaTcaCc88A0.003096
ORF1ab/nsp31683I1683TaTcaCc88AY.46.60.000578
ORF1ab/nsp31683I1683TaTcaCc88B.1.2220.013536
ORF1ab/nsp31683I1683TaTcaCc77AY.1190.000247
ORF1ab/nsp31683I1683TaTcaCc77AY.290.00011
ORF1ab/nsp31683I1683TaTcaCc77AY.39.10.000277
ORF1ab/nsp31683I1683TaTcaCc77B.1.177.730.003964
ORF1ab/nsp31683I1683TaTcaCc77B.1.3750.005738
ORF1ab/nsp31683I1683TaTcaCc77B.1.6000.040936
ORF1ab/nsp31683I1683TaTcaCc77B.4.10.132075
ORF1ab/nsp31683I1683TaTcaCc66AY.1180.000376
ORF1ab/nsp31683I1683TaTcaCc66AY.390.000148
ORF1ab/nsp31683I1683TaTcaCc66AY.420.000241
ORF1ab/nsp31683I1683TaTcaCc66B.1.177.60.005859
ORF1ab/nsp31683I1683TaTcaCc66B.1.177.860.001101
ORF1ab/nsp31683I1683TaTcaCc66B.1.5900.027273
ORF1ab/nsp31683I1683TaTcaCc55AY.1020.000133
ORF1ab/nsp31683I1683TaTcaCc55B.1.214.20.002998
ORF1ab/nsp31683I1683TaTcaCc55Q.70.005556
ORF1ab/nsp31683I1683TaTcaCc44AY.1170.000338
ORF1ab/nsp31683I1683TaTcaCc44AY.200.000155
ORF1ab/nsp31683I1683TaTcaCc44AY.260.000113
ORF1ab/nsp31683I1683TaTcaCc44AY.60.000165
ORF1ab/nsp31683I1683TaTcaCc44B.1.1.390.002039
ORF1ab/nsp31683I1683TaTcaCc44B.1.1.5190.000159
ORF1ab/nsp31683I1683TaTcaCc44B.1.5260.000094
ORF1ab/nsp31683I1683TaTCaCT230.111111
ORF1ab/nsp31683I1683TaTcaCc130.055556
ORF1ab/nsp31683I1683TaTcaCc33AU.30.006329
ORF1ab/nsp31683I1683TaTcaCc33AY.1000.000138
ORF1ab/nsp31683I1683TaTcaCc33AY.1130.000427
ORF1ab/nsp31683I1683TaTcaCc33AY.3.10.000256
ORF1ab/nsp31683I1683TaTcaCc33AY.750.000168
ORF1ab/nsp31683I1683TaTcaCc33B.1.1.330.001263
ORF1ab/nsp31683I1683TaTcaCc33B.1.1.500.002037
ORF1ab/nsp31683I1683TaTcaCc33B.1.177.440.001557
ORF1ab/nsp31683I1683TaTcaCc33B.1.360.000438
ORF1ab/nsp31683I1683TaTcaCc33B.1.4110.011111
ORF1ab/nsp31683I1683TaTcaCc33B.1.5960.000261
ORF1ab/nsp31683I1683TaTcaCc33P.20.00056
ORF1ab/nsp31683I1683TaTcaCc22A.2.5.30.020619
ORF1ab/nsp31683I1683TaTcaCc22AY.330.000134
ORF1ab/nsp31683I1683TaTcaCc22AY.4.20.000043
ORF1ab/nsp31683I1683TaTcaCc22AY.9.20.000073
ORF1ab/nsp31683I1683TaTcaCc22B.1.1.1530.002191
ORF1ab/nsp31683I1683TaTcaCc22B.1.1.2160.001781
ORF1ab/nsp31683I1683TaTcaCc22B.1.1.5250.010929
ORF1ab/nsp31683I1683TaTcaCc22B.1.1570.00597
ORF1ab/nsp31683I1683TaTcaCc22B.1.177.210.000153
ORF1ab/nsp31683I1683TaTcaCc22B.1.177.670.015267
ORF1ab/nsp31683I1683TaTcaCc22B.1.177.810.000379
ORF1ab/nsp31683I1683TaTcaCc22B.1.2370.00995
ORF1ab/nsp31683I1683TaTcaCc22B.1.2430.000139
ORF1ab/nsp31683I1683TaTcaCc22B.1.3510.000059
ORF1ab/nsp31683I1683TaTcaCc22B.1.4290.000047
ORF1ab/nsp31683I1683TaTcaCc22B.1.4320.022472
ORF1ab/nsp31683I1683TaTcaCc22B.1.4800.004975
ORF1ab/nsp31683I1683TaTcaCc22B.1.5950.000522
ORF1ab/nsp31683I1683TaTcaCc22B.1.6210.000177
ORF1ab/nsp31683I1683TaTcaCc22C.290.125
ORF1ab/nsp31683I1683TaTcaCc22Z.10.00578
ORF1ab/nsp31683I1683TaTcaCc11A.2.50.000499
ORF1ab/nsp31683I1683TaTcaCc11A.30.002096
ORF1ab/nsp31683I1683TaTcaCc11AY.100.00053
ORF1ab/nsp31683I1683TaTcaCc11AY.1070.000466
ORF1ab/nsp31683I1683TaTcaCc11AY.1160.000287
ORF1ab/nsp31683I1683TaTcaCc11AY.300.000396
ORF1ab/nsp31683I1683TaTcaCc11AY.4.50.000107
ORF1ab/nsp31683I1683TaTcaCc11AY.46.40.000165
ORF1ab/nsp31683I1683TaTcaCc11AY.46.50.000198
ORF1ab/nsp31683I1683TaTcaCc11AY.5.40.000277
ORF1ab/nsp31683I1683TaTcaCc11AY.540.000095
ORF1ab/nsp31683I1683TaTcaCc11AY.590.00053
ORF1ab/nsp31683I1683TaTcaCc11AY.600.000938
ORF1ab/nsp31683I1683TaTcaCc11AY.680.000274
ORF1ab/nsp31683I1683TaTcaCc11AY.700.000209
ORF1ab/nsp31683I1683TaTcaCc11AY.710.000475
ORF1ab/nsp31683I1683TaTcaCc11AY.75.10.00018
ORF1ab/nsp31683I1683TaTcaCc11AY.840.000437
ORF1ab/nsp31683I1683TaTcaCc11AY.90.000068
ORF1ab/nsp31683I1683TaTcaCc11AY.99.20.000092
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.100.001115
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.1610.003534
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.1700.001247
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.2220.000204
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.2880.001916
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.370.000193
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.3720.000689
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.3890.006061
ORF1ab/nsp31683I1683TaTcaCc11B.1.1.5260.003546
ORF1ab/nsp31683I1683TaTcaCc11B.1.1110.001175
ORF1ab/nsp31683I1683TaTcaCc11B.1.1460.004237
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.120.000152
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.280.007407
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.40.000211
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.420.000894
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.500.004695
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.70.000165
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.720.00339
ORF1ab/nsp31683I1683TaTcaCc11B.1.177.750.001041
ORF1ab/nsp31683I1683TaTcaCc11B.1.2060.000816
ORF1ab/nsp31683I1683TaTcaCc11B.1.221.10.002907
ORF1ab/nsp31683I1683TaTcaCc11B.1.2420.018868
ORF1ab/nsp31683I1683TaTcaCc11B.1.2470.014925
ORF1ab/nsp31683I1683TaTcaCc11B.1.2840.013158
ORF1ab/nsp31683I1683TaTcaCc11B.1.2930.0125
ORF1ab/nsp31683I1683TaTcaCc11B.1.3260.007576
ORF1ab/nsp31683I1683TaTcaCc11B.1.3490.000715
ORF1ab/nsp31683I1683TaTcaCc11B.1.36.350.002604
ORF1ab/nsp31683I1683TaTcaCc11B.1.3620.001541
ORF1ab/nsp31683I1683TaTcaCc11B.1.3800.006623
ORF1ab/nsp31683I1683TaTcaCc11B.1.4060.006061
ORF1ab/nsp31683I1683TaTcaCc11B.1.4160.001269
ORF1ab/nsp31683I1683TaTcaCc11B.1.4730.019231
ORF1ab/nsp31683I1683TaTcaCc11B.1.5250.000113
ORF1ab/nsp31683I1683TaTcaCc11B.1.5760.000907
ORF1ab/nsp31683I1683TaTcaCc11B.1.5990.00365
ORF1ab/nsp31683I1683TaTcaCc11B.1.6280.000352
ORF1ab/nsp31683I1683TaTcaCc11B.1.6370.000073
ORF1ab/nsp31683I1683TaTcaCc11B.1.6380.052632
ORF1ab/nsp31683I1683TaTcaCc11B.1.9.50.005682
ORF1ab/nsp31683I1683TaTcaCc11K.10.02381
ORF1ab/nsp31683I1683TaTcaCc11P.1.70.000319
ORF1ab/nsp31683I1683TaTcaCc11Q.30.000145