CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = I1683I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31683I1683II2501IsynatCatT22309222740.9984317766-7768
ORF1ab/nsp31683I1683II2501IsynatCatA22309350.001568877766-7768

Details of the mutation I1683I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31683I1683IatCatT2227422309All0.00426
ORF1ab/nsp31683I1683IatCatA3522309All0.000007
ORF1ab/nsp31683I1683IatCatT1985019850AY.98.10.961352
ORF1ab/nsp31683I1683IatCatT554554B.1.2410.449675
ORF1ab/nsp31683I1683IatCatT380381B.1.1.70.00034
ORF1ab/nsp31683I1683IatCatA1381B.1.1.70.000001
ORF1ab/nsp31683I1683IatCatT247252AY.40.000384
ORF1ab/nsp31683I1683IatCatA5252AY.40.000008
ORF1ab/nsp31683I1683IatCatT218218B.1.5050.95614
ORF1ab/nsp31683I1683IatCatT206206AY.430.000913
ORF1ab/nsp31683I1683IatCatT183183B.1.6300.958115
ORF1ab/nsp31683I1683IatCatT102102AY.1030.000633
ORF1ab/nsp31683I1683IatCatT5357B.1.617.20.0002
ORF1ab/nsp31683I1683IatCatA457B.1.617.20.000015
ORF1ab/nsp31683I1683IatCatT4851AY.980.003792
ORF1ab/nsp31683I1683IatCatA351AY.980.000237
ORF1ab/nsp31683I1683IatCatT3636B.1.2340.00475
ORF1ab/nsp31683I1683IatCatT3334B.10.000302
ORF1ab/nsp31683I1683IatCatA134B.10.000009
ORF1ab/nsp31683I1683IatCatT2727AY.90.001825
ORF1ab/nsp31683I1683IatCatT2022AY.250.00012
ORF1ab/nsp31683I1683IatCatA222AY.250.000012
ORF1ab/nsp31683I1683IatCatT2020P.10.000315
ORF1ab/nsp31683I1683IatCatT1919AY.46.60.001372
ORF1ab/nsp31683I1683IatCatT1919B.1.6370.001388
ORF1ab/nsp31683I1683IatCatT1616AY.440.000097
ORF1ab/nsp31683I1683IatCatT1212AY.750.000672
ORF1ab/nsp31683I1683IatCatT1111AY.1200.000409
ORF1ab/nsp31683I1683IatCatT910B.1.10.000163
ORF1ab/nsp31683I1683IatCatA110B.1.10.000018
ORF1ab/nsp31683I1683IatCatT1010C.370.001161
ORF1ab/nsp31683I1683IatCatT99B.1.177.820.004296
ORF1ab/nsp31683I1683IatCatT89B.1.20.00007
ORF1ab/nsp31683I1683IatCatA19B.1.20.000009
ORF1ab/nsp31683I1683IatCatT99B.1.438.10.000965
ORF1ab/nsp31683I1683IatCatT77AY.1000.000322
ORF1ab/nsp31683I1683IatCatT47B.1.2210.000284
ORF1ab/nsp31683I1683IatCatA37B.1.2210.000213
ORF1ab/nsp31683I1683IatCatT46AY.30.00004
ORF1ab/nsp31683I1683IatCatA26AY.30.00002
ORF1ab/nsp31683I1683IatCatT66B.1.351.50.003597
ORF1ab/nsp31683I1683IatCatT66R.10.00054
ORF1ab/nsp31683I1683IatCatT55AY.360.000741
ORF1ab/nsp31683I1683IatCatT55P.1.140.000239
ORF1ab/nsp31683I1683IatCatT44AY.1020.000106
ORF1ab/nsp31683I1683IatCatT44AY.1190.000141
ORF1ab/nsp31683I1683IatCatT44AY.290.000063
ORF1ab/nsp31683I1683IatCatT44AY.390.000099
ORF1ab/nsp31683I1683IatCatT44AY.740.000463
ORF1ab/nsp31683I1683IatCatT44B.1.1.2140.000222
ORF1ab/nsp31683I1683IatCatT44B.1.1.5190.000159
ORF1ab/nsp31683I1683IatCatT44B.1.2430.000278
ORF1ab/nsp31683I1683IatCatT33AY.270.000194
ORF1ab/nsp31683I1683IatCatT33AY.4.20.000065
ORF1ab/nsp31683I1683IatCatT33AY.420.000121
ORF1ab/nsp31683I1683IatCatT33AY.460.000312
ORF1ab/nsp31683I1683IatCatT33AY.690.00056
ORF1ab/nsp31683I1683IatCatT33AY.840.001312
ORF1ab/nsp31683I1683IatCatT33B.1.1.120.022388
ORF1ab/nsp31683I1683IatCatT22AY.1170.000169
ORF1ab/nsp31683I1683IatCatT22AY.1210.000271
ORF1ab/nsp31683I1683IatCatT22AY.130.000322
ORF1ab/nsp31683I1683IatCatT22AY.4.40.000818
ORF1ab/nsp31683I1683IatCatT22AY.470.000062
ORF1ab/nsp31683I1683IatCatT22AY.50.000041
ORF1ab/nsp31683I1683IatCatT22AY.5.30.000675
ORF1ab/nsp31683I1683IatCatT22AY.9.20.000073
ORF1ab/nsp31683I1683IatCatT22AY.930.000546
ORF1ab/nsp31683I1683IatCatT22B.1.1.1810.009091
ORF1ab/nsp31683I1683IatCatT22B.1.1.2160.001781
ORF1ab/nsp31683I1683IatCatT22B.1.1.3060.000877
ORF1ab/nsp31683I1683IatCatA22B.1.1.3260.003521
ORF1ab/nsp31683I1683IatCatT22B.1.160.250.022222
ORF1ab/nsp31683I1683IatCatT22B.1.177.320.002699
ORF1ab/nsp31683I1683IatCatT22B.1.2980.004228
ORF1ab/nsp31683I1683IatCatT22B.1.3320.006993
ORF1ab/nsp31683I1683IatCatT22B.1.3510.000059
ORF1ab/nsp31683I1683IatCatT22B.1.466.20.000782
ORF1ab/nsp31683I1683IatCatT22B.1.5750.000607
ORF1ab/nsp31683I1683IatCatT22B.1.617.10.000258
ORF1ab/nsp31683I1683IatCatT22D.20.00015
ORF1ab/nsp31683I1683IatCatA11A.2.40.003367
ORF1ab/nsp31683I1683IatCatT11A.2.50.000499
ORF1ab/nsp31683I1683IatCatT11AY.1060.000335
ORF1ab/nsp31683I1683IatCatT11AY.1130.000142
ORF1ab/nsp31683I1683IatCatT11AY.160.00038
ORF1ab/nsp31683I1683IatCatA11AY.190.00114
ORF1ab/nsp31683I1683IatCatT11AY.200.000039
ORF1ab/nsp31683I1683IatCatT11AY.230.00007
ORF1ab/nsp31683I1683IatCatA11AY.29.10.000221
ORF1ab/nsp31683I1683IatCatT11AY.300.000396
ORF1ab/nsp31683I1683IatCatT11AY.330.000067
ORF1ab/nsp31683I1683IatCatT11AY.450.000122
ORF1ab/nsp31683I1683IatCatT11AY.480.000465
ORF1ab/nsp31683I1683IatCatT11AY.5.40.000277
ORF1ab/nsp31683I1683IatCatT11AY.540.000095
ORF1ab/nsp31683I1683IatCatT11AY.7.10.000113
ORF1ab/nsp31683I1683IatCatT11AY.75.10.00018
ORF1ab/nsp31683I1683IatCatT11AY.820.001357
ORF1ab/nsp31683I1683IatCatA11AY.870.000833
ORF1ab/nsp31683I1683IatCatA11AY.9.10.000084
ORF1ab/nsp31683I1683IatCatT11AY.920.000287
ORF1ab/nsp31683I1683IatCatT11B.1.1.1290.009174
ORF1ab/nsp31683I1683IatCatT11B.1.1.1610.003534
ORF1ab/nsp31683I1683IatCatT11B.1.1.1760.000439
ORF1ab/nsp31683I1683IatCatT11B.1.1.2840.000107
ORF1ab/nsp31683I1683IatCatT11B.1.1.2940.001266
ORF1ab/nsp31683I1683IatCatT11B.1.1.330.000421
ORF1ab/nsp31683I1683IatCatA11B.1.1.3770.001381
ORF1ab/nsp31683I1683IatCatT11B.1.1.4340.000349
ORF1ab/nsp31683I1683IatCatA11B.1.1.630.000386
ORF1ab/nsp31683I1683IatCatT11B.1.1.710.006061
ORF1ab/nsp31683I1683IatCatT11B.1.1770.000013
ORF1ab/nsp31683I1683IatCatT11B.1.177.160.000664
ORF1ab/nsp31683I1683IatCatT11B.1.177.440.000519
ORF1ab/nsp31683I1683IatCatT11B.1.177.570.000281
ORF1ab/nsp31683I1683IatCatT11B.1.3110.000275
ORF1ab/nsp31683I1683IatCatA11B.1.351.20.000303
ORF1ab/nsp31683I1683IatCatT11B.1.360.000146
ORF1ab/nsp31683I1683IatCatT11B.1.36.220.001208
ORF1ab/nsp31683I1683IatCatT11B.1.3670.000792
ORF1ab/nsp31683I1683IatCatT11B.1.4290.000024
ORF1ab/nsp31683I1683IatCatT11B.1.4320.011236
ORF1ab/nsp31683I1683IatCatT11B.1.4990.00105
ORF1ab/nsp31683I1683IatCatT11B.1.5240.001406
ORF1ab/nsp31683I1683IatCatA11B.1.5820.000491
ORF1ab/nsp31683I1683IatCatT11B.1.6150.04
ORF1ab/nsp31683I1683IatCatT11B.1.617.30.002985
ORF1ab/nsp31683I1683IatCatT11B.1.6280.000352
ORF1ab/nsp31683I1683IatCatT11B.610.005747
ORF1ab/nsp31683I1683IatCatA11C.350.000774
ORF1ab/nsp31683I1683IatCatT11P.20.000187
ORF1ab/nsp31683I1683IatCatT11Q.20.000613
ORF1ab/nsp31683I1683IatCatT11Q.40.000455