CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = I1528T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31528I1528TI2346TnonsynaTcaCc3633600.9917367301-7303
ORF1ab/nsp31528I1528TI2346TnonsynaTCaCA36330.008264467301-7303

Details of the mutation I1528T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31528I1528TaTcaCc360363All0.000069
ORF1ab/nsp31528I1528TaTCaCA3363All0.000001
ORF1ab/nsp31528I1528TaTcaCc125125AY.40.000195
ORF1ab/nsp31528I1528TaTcaCc4444B.1.617.20.000166
ORF1ab/nsp31528I1528TaTcaCc3030AY.1030.000186
ORF1ab/nsp31528I1528TaTcaCc2222AY.430.000097
ORF1ab/nsp31528I1528TaTcaCc1819B.1.1.70.000016
ORF1ab/nsp31528I1528TaTCaCA119B.1.1.70.000001
ORF1ab/nsp31528I1528TaTcaCc1111B.10.000101
ORF1ab/nsp31528I1528TaTcaCc99AY.30.00009
ORF1ab/nsp31528I1528TaTcaCc99AY.9.2.10.017787
ORF1ab/nsp31528I1528TaTcaCc88AY.260.000226
ORF1ab/nsp31528I1528TaTcaCc88C.370.000929
ORF1ab/nsp31528I1528TaTcaCc77B.1.20.000062
ORF1ab/nsp31528I1528TaTcaCc66AY.390.000148
ORF1ab/nsp31528I1528TaTcaCc44B.1.1.1570.003653
ORF1ab/nsp31528I1528TaTcaCc44B.1.160.230.019324
ORF1ab/nsp31528I1528TaTcaCc44B.1.4000.001716
ORF1ab/nsp31528I1528TaTcaCc33AY.1020.00008
ORF1ab/nsp31528I1528TaTcaCc33AY.440.000018
ORF1ab/nsp31528I1528TaTcaCc22AY.1110.000366
ORF1ab/nsp31528I1528TaTcaCc22AY.250.000012
ORF1ab/nsp31528I1528TaTcaCc22AY.320.001065
ORF1ab/nsp31528I1528TaTcaCc22AY.360.000296
ORF1ab/nsp31528I1528TaTcaCc22AY.9.20.000073
ORF1ab/nsp31528I1528TaTcaCc22AY.99.20.000184
ORF1ab/nsp31528I1528TaTcaCc22B.1.1770.000026
ORF1ab/nsp31528I1528TaTcaCc22B.1.3360.004878
ORF1ab/nsp31528I1528TaTcaCc22B.1.351.30.001753
ORF1ab/nsp31528I1528TaTcaCc22B.1.36.10.002281
ORF1ab/nsp31528I1528TaTcaCc22B.1.6210.000177
ORF1ab/nsp31528I1528TaTcaCc22P.10.000032
ORF1ab/nsp31528I1528TaTCaCA11AY.1160.000287
ORF1ab/nsp31528I1528TaTcaCc11AY.1200.000037
ORF1ab/nsp31528I1528TaTcaCc11AY.290.000016
ORF1ab/nsp31528I1528TaTcaCc11AY.29.10.000221
ORF1ab/nsp31528I1528TaTCaCA11AY.380.000499
ORF1ab/nsp31528I1528TaTcaCc11AY.4.2.10.000149
ORF1ab/nsp31528I1528TaTcaCc11AY.46.60.000072
ORF1ab/nsp31528I1528TaTcaCc11AY.50.000021
ORF1ab/nsp31528I1528TaTcaCc11AY.560.001605
ORF1ab/nsp31528I1528TaTcaCc11AY.60.000041
ORF1ab/nsp31528I1528TaTcaCc11AY.680.000274
ORF1ab/nsp31528I1528TaTcaCc11AY.7.10.000113
ORF1ab/nsp31528I1528TaTcaCc11AY.740.000116
ORF1ab/nsp31528I1528TaTcaCc11AY.750.000056
ORF1ab/nsp31528I1528TaTcaCc11B.1.10.000018
ORF1ab/nsp31528I1528TaTcaCc11B.1.1.1890.001513
ORF1ab/nsp31528I1528TaTcaCc11B.1.1.2140.000055
ORF1ab/nsp31528I1528TaTcaCc11B.1.258.170.000104
ORF1ab/nsp31528I1528TaTcaCc11B.1.3110.000275
ORF1ab/nsp31528I1528TaTcaCc11B.1.5260.000024
ORF1ab/nsp31528I1528TaTcaCc11B.1.6280.000352
ORF1ab/nsp31528I1528TaTcaCc11D.20.000075
ORF1ab/nsp31528I1528TaTcaCc11Q.80.000165