CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H446Q

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3446H446QH1264QnonsyncaTcaG22140.6363644055-4057
ORF1ab/nsp3446H446QH1264QnonsyncaTcaA2280.3636364055-4057

Details of the mutation H446Q within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3446H446QcaTcaG1422All0.000003
ORF1ab/nsp3446H446QcaTcaA822All0.000002
ORF1ab/nsp3446H446QcaTcaG1112B.1.1.70.00001
ORF1ab/nsp3446H446QcaTcaA112B.1.1.70.000001
ORF1ab/nsp3446H446QcaTcaA22P.10.000032
ORF1ab/nsp3446H446QcaTcaA110.055556
ORF1ab/nsp3446H446QcaTcaA11AY.116.10.000311
ORF1ab/nsp3446H446QcaTcaG11AY.430.000004
ORF1ab/nsp3446H446QcaTcaG11B.1.1.3000.010753
ORF1ab/nsp3446H446QcaTcaG11B.1.177.820.000477
ORF1ab/nsp3446H446QcaTcaA11B.1.4290.000024
ORF1ab/nsp3446H446QcaTcaA11B.1.5260.000024
ORF1ab/nsp3446H446QcaTcaA11P.1.10.000318