CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H446H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3446H446HH1264HsyncaTcaC2380238014055-4057

Details of the mutation H446H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3446H446HcaTcaC23802380All0.000455
ORF1ab/nsp3446H446HcaTcaC12571257AY.40.001956
ORF1ab/nsp3446H446HcaTcaC463463B.1.36.211
ORF1ab/nsp3446H446HcaTcaC165165AY.1030.001024
ORF1ab/nsp3446H446HcaTcaC131131B.1.1.70.000117
ORF1ab/nsp3446H446HcaTcaC5656AY.250.000337
ORF1ab/nsp3446H446HcaTcaC2525B.1.617.20.000094
ORF1ab/nsp3446H446HcaTcaC2424B.1.1770.000316
ORF1ab/nsp3446H446HcaTcaC2121B.1.5260.000494
ORF1ab/nsp3446H446HcaTcaC2020B.1.4270.00101
ORF1ab/nsp3446H446HcaTcaC1616B.1.20.000141
ORF1ab/nsp3446H446HcaTcaC1111AY.390.000272
ORF1ab/nsp3446H446HcaTcaC1010A.210.027701
ORF1ab/nsp3446H446HcaTcaC1010B.1.1.5190.000397
ORF1ab/nsp3446H446HcaTcaC99AY.1020.000239
ORF1ab/nsp3446H446HcaTcaC99AY.430.00004
ORF1ab/nsp3446H446HcaTcaC99P.10.000142
ORF1ab/nsp3446H446HcaTcaC77AY.290.00011
ORF1ab/nsp3446H446HcaTcaC77AY.360.001037
ORF1ab/nsp3446H446HcaTcaC77B.10.000064
ORF1ab/nsp3446H446HcaTcaC77B.1.10.000127
ORF1ab/nsp3446H446HcaTcaC66AY.3.10.000512
ORF1ab/nsp3446H446HcaTcaC55AY.420.000201
ORF1ab/nsp3446H446HcaTcaC55AY.98.10.000242
ORF1ab/nsp3446H446HcaTcaC55P.1.140.000239
ORF1ab/nsp3446H446HcaTcaC44AY.30.00004
ORF1ab/nsp3446H446HcaTcaC44B.1.258.170.000416
ORF1ab/nsp3446H446HcaTcaC44B.1.4260.004036
ORF1ab/nsp3446H446HcaTcaC33AY.200.000117
ORF1ab/nsp3446H446HcaTcaC33AY.440.000018
ORF1ab/nsp3446H446HcaTcaC33AY.470.000093
ORF1ab/nsp3446H446HcaTcaC33B0.000383
ORF1ab/nsp3446H446HcaTcaC33B.1.1.2220.000612
ORF1ab/nsp3446H446HcaTcaC33B.1.258.220.008
ORF1ab/nsp3446H446HcaTcaC33B.1.351.20.000908
ORF1ab/nsp3446H446HcaTcaC33B.1.6360.020134
ORF1ab/nsp3446H446HcaTcaC22AY.1050.001286
ORF1ab/nsp3446H446HcaTcaC22AY.1200.000074
ORF1ab/nsp3446H446HcaTcaC22AY.140.000176
ORF1ab/nsp3446H446HcaTcaC22AY.260.000057
ORF1ab/nsp3446H446HcaTcaC22AY.7.20.001119
ORF1ab/nsp3446H446HcaTcaC22AY.920.000575
ORF1ab/nsp3446H446HcaTcaC22B.1.36.380.003284
ORF1ab/nsp3446H446HcaTcaC22B.1.4290.000047
ORF1ab/nsp3446H446HcaTcaC22B.1.5680.002222
ORF1ab/nsp3446H446HcaTcaC22D.20.00015
ORF1ab/nsp3446H446HcaTcaC11A.20.000662
ORF1ab/nsp3446H446HcaTcaC11AY.1000.000046
ORF1ab/nsp3446H446HcaTcaC11AY.1060.000335
ORF1ab/nsp3446H446HcaTcaC11AY.1170.000085
ORF1ab/nsp3446H446HcaTcaC11AY.1180.000063
ORF1ab/nsp3446H446HcaTcaC11AY.160.00038
ORF1ab/nsp3446H446HcaTcaC11AY.230.00007
ORF1ab/nsp3446H446HcaTcaC11AY.23.10.000417
ORF1ab/nsp3446H446HcaTcaC11AY.39.10.00004
ORF1ab/nsp3446H446HcaTcaC11AY.490.003195
ORF1ab/nsp3446H446HcaTcaC11AY.50.000021
ORF1ab/nsp3446H446HcaTcaC11AY.510.000909
ORF1ab/nsp3446H446HcaTcaC11AY.610.000105
ORF1ab/nsp3446H446HcaTcaC11AY.640.000595
ORF1ab/nsp3446H446HcaTcaC11AY.7.10.000113
ORF1ab/nsp3446H446HcaTcaC11AY.730.000665
ORF1ab/nsp3446H446HcaTcaC11AY.890.004902
ORF1ab/nsp3446H446HcaTcaC11AY.9.20.000037
ORF1ab/nsp3446H446HcaTcaC11AY.980.000079
ORF1ab/nsp3446H446HcaTcaC11B.1.1.280.000311
ORF1ab/nsp3446H446HcaTcaC11B.1.1.2840.000107
ORF1ab/nsp3446H446HcaTcaC11B.1.1.370.000193
ORF1ab/nsp3446H446HcaTcaC11B.1.1.4160.000905
ORF1ab/nsp3446H446HcaTcaC11B.1.1390.000733
ORF1ab/nsp3446H446HcaTcaC11B.1.1600.000031
ORF1ab/nsp3446H446HcaTcaC11B.1.177.120.000152
ORF1ab/nsp3446H446HcaTcaC11B.1.177.420.000894
ORF1ab/nsp3446H446HcaTcaC11B.1.177.620.001192
ORF1ab/nsp3446H446HcaTcaC11B.1.2060.000816
ORF1ab/nsp3446H446HcaTcaC11B.1.220.001318
ORF1ab/nsp3446H446HcaTcaC11B.1.2430.00007
ORF1ab/nsp3446H446HcaTcaC11B.1.360.000146
ORF1ab/nsp3446H446HcaTcaC11B.1.36.370.002778
ORF1ab/nsp3446H446HcaTcaC11B.1.4090.000781
ORF1ab/nsp3446H446HcaTcaC11B.1.5770.000687
ORF1ab/nsp3446H446HcaTcaC11B.1.617.10.000129
ORF1ab/nsp3446H446HcaTcaC11B.1.6280.000352
ORF1ab/nsp3446H446HcaTcaC11B.400.000364
ORF1ab/nsp3446H446HcaTcaC11R.10.00009