CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H342Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3342H342YH1160YnonsynCatTat702870270.9998583743-3745
ORF1ab/nsp3342H342YH1160YnonsynCaTTaC702810.0001422883743-3745

Details of the mutation H342Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3342H342YCatTat70277028All0.001344
ORF1ab/nsp3342H342YCaTTaC17028All0
ORF1ab/nsp3342H342YCatTat17581758B.1.1.70.001574
ORF1ab/nsp3342H342YCatTat861861AY.40.00134
ORF1ab/nsp3342H342YCatTat399399AY.1030.002477
ORF1ab/nsp3342H342YCatTat320320B.1.20.002818
ORF1ab/nsp3342H342YCatTat207207B.1.221.40.8625
ORF1ab/nsp3342H342YCatTat200200B.1.617.20.000753
ORF1ab/nsp3342H342YCatTat189189AV.10.954545
ORF1ab/nsp3342H342YCatTat148148B.1.2340.019528
ORF1ab/nsp3342H342YCatTat130130B.1.1.3170.05352
ORF1ab/nsp3342H342YCatTat118118B.1.438.10.012657
ORF1ab/nsp3342H342YCatTat113113AY.250.00068
ORF1ab/nsp3342H342YCatTat112112B.10.001026
ORF1ab/nsp3342H342YCatTat106106AY.440.000645
ORF1ab/nsp3342H342YCatTat100100P.10.001575
ORF1ab/nsp3342H342YCatTat9595AY.340.009212
ORF1ab/nsp3342H342YCatTat8686B.1.1770.001132
ORF1ab/nsp3342H342YCatTat7575AY.430.000332
ORF1ab/nsp3342H342YCatTat6868AY.30.000676
ORF1ab/nsp3342H342YCatTat6868AY.4.2.10.010131
ORF1ab/nsp3342H342YCatTat6363B.1.1600.001965
ORF1ab/nsp3342H342YCatTat5656B.1.5610.022231
ORF1ab/nsp3342H342YCatTat5555B.1.2210.003907
ORF1ab/nsp3342H342YCatTat5454B.1.10.00098
ORF1ab/nsp3342H342YCatTat4848B.1.3431
ORF1ab/nsp3342H342YCatTat4545B.1.5260.001058
ORF1ab/nsp3342H342YCatTat4343B.1.2580.002862
ORF1ab/nsp3342H342YCatTat4242B.1.4270.002121
ORF1ab/nsp3342H342YCatTat4242B.1.6190.036585
ORF1ab/nsp3342H342YCatTat4141AY.390.001013
ORF1ab/nsp3342H342YCatTat3434B.1.1.3770.046961
ORF1ab/nsp3342H342YCatTat3434B.1.177.120.005158
ORF1ab/nsp3342H342YCatTat3232AY.1000.001472
ORF1ab/nsp3342H342YCatTat3232B.1.1.330.013468
ORF1ab/nsp3342H342YCatTat3030Q.10.00379
ORF1ab/nsp3342H342YCatTat2728B.1.1.5190.001072
ORF1ab/nsp3342H342YCaTTaC128B.1.1.5190.00004
ORF1ab/nsp3342H342YCatTat2828B.1.4290.000659
ORF1ab/nsp3342H342YCatTat2727AY.1190.000953
ORF1ab/nsp3342H342YCatTat2727AY.4.20.000586
ORF1ab/nsp3342H342YCatTat2626B.1.1.3060.011399
ORF1ab/nsp3342H342YCatTat2525B.1.3510.000743
ORF1ab/nsp3342H342YCatTat2323B.1.5250.002603
ORF1ab/nsp3342H342YCatTat2323B.1.6210.002036
ORF1ab/nsp3342H342YCatTat2121B.1.177.530.050239
ORF1ab/nsp3342H342YCatTat2020AY.1020.00053
ORF1ab/nsp3342H342YCatTat2020AY.270.001294
ORF1ab/nsp3342H342YCatTat1919P.1.140.000908
ORF1ab/nsp3342H342YCatTat1818AY.950.013699
ORF1ab/nsp3342H342YCatTat1818B.1.1.1890.027231
ORF1ab/nsp3342H342YCatTat1717B.1.1.2140.000943
ORF1ab/nsp3342H342YCatTat1616B.1.177.810.003029
ORF1ab/nsp3342H342YCatTat1616B.1.3240.025682
ORF1ab/nsp3342H342YCatTat1515B.1.1260.019133
ORF1ab/nsp3342H342YCatTat1515B.1.177.750.015609
ORF1ab/nsp3342H342YCatTat1414AY.330.000935
ORF1ab/nsp3342H342YCatTat1414B.1.1.1760.006151
ORF1ab/nsp3342H342YCatTat1414B.1.1.3700.177215
ORF1ab/nsp3342H342YCatTat1414B.1.2430.000974
ORF1ab/nsp3342H342YCatTat1313AY.200.000505
ORF1ab/nsp3342H342YCatTat1313AY.750.000728
ORF1ab/nsp3342H342YCatTat1313AY.99.20.001198
ORF1ab/nsp3342H342YCatTat1313B.1.6270.026263
ORF1ab/nsp3342H342YCatTat1313B.1.6280.004581
ORF1ab/nsp3342H342YCatTat1212A.2.50.005988
ORF1ab/nsp3342H342YCatTat1212AY.1180.000752
ORF1ab/nsp3342H342YCatTat1212B0.001534
ORF1ab/nsp3342H342YCatTat1111AY.1200.000409
ORF1ab/nsp3342H342YCatTat1111AY.420.000443
ORF1ab/nsp3342H342YCatTat1111AY.46.60.000794
ORF1ab/nsp3342H342YCatTat1111AY.50.000227
ORF1ab/nsp3342H342YCatTat1111B.1.1.2840.001181
ORF1ab/nsp3342H342YCatTat1111B.1.5640.004685
ORF1ab/nsp3342H342YCatTat1111C.370.001277
ORF1ab/nsp3342H342YCatTat1010AY.1130.001424
ORF1ab/nsp3342H342YCatTat1010AY.650.00533
ORF1ab/nsp3342H342YCatTat1010B.1.466.20.003912
ORF1ab/nsp3342H342YCatTat1010B.1.5750.003034
ORF1ab/nsp3342H342YCatTat1010B.1.5960.000871
ORF1ab/nsp3342H342YCatTat1010B.1.6260.057143
ORF1ab/nsp3342H342YCatTat99AY.290.000142
ORF1ab/nsp3342H342YCatTat99AY.450.001095
ORF1ab/nsp3342H342YCatTat99AY.470.00028
ORF1ab/nsp3342H342YCatTat99AY.630.003482
ORF1ab/nsp3342H342YCatTat99B.1.1.3180.002716
ORF1ab/nsp3342H342YCatTat99B.1.4700.01264
ORF1ab/nsp3342H342YCatTat99B.1.6370.000658
ORF1ab/nsp3342H342YCatTat99Q.40.004093
ORF1ab/nsp3342H342YCatTat88AY.260.000226
ORF1ab/nsp3342H342YCatTat88AY.520.006515
ORF1ab/nsp3342H342YCatTat88AY.990.008395
ORF1ab/nsp3342H342YCatTat88B.1.1.3970.018018
ORF1ab/nsp3342H342YCatTat88B.1.160.230.038647
ORF1ab/nsp3342H342YCatTat88P.1.170.001294
ORF1ab/nsp3342H342YCatTat77AY.230.000488
ORF1ab/nsp3342H342YCatTat77B.1.258.170.000728
ORF1ab/nsp3342H342YCatTat77P.1.150.001626
ORF1ab/nsp3342H342YCatTat66AY.3.10.000512
ORF1ab/nsp3342H342YCatTat66B.1.1.560.107143
ORF1ab/nsp3342H342YCatTat66B.1.4000.002574
ORF1ab/nsp3342H342YCatTat66B.1.416.10.009375
ORF1ab/nsp3342H342YCatTat55AD.20.001095
ORF1ab/nsp3342H342YCatTat55AY.1160.001434
ORF1ab/nsp3342H342YCatTat55AY.610.000524
ORF1ab/nsp3342H342YCatTat55AY.99.10.007764
ORF1ab/nsp3342H342YCatTat55B.1.1.2220.00102
ORF1ab/nsp3342H342YCatTat55B.1.177.210.000382
ORF1ab/nsp3342H342YCatTat55B.1.360.00073
ORF1ab/nsp3342H342YCatTat55P.1.70.001596
ORF1ab/nsp3342H342YCatTat44AY.1170.000338
ORF1ab/nsp3342H342YCatTat44AY.39.10.000158
ORF1ab/nsp3342H342YCatTat44AY.5.10.015038
ORF1ab/nsp3342H342YCatTat44AY.550.00367
ORF1ab/nsp3342H342YCatTat44AY.60.000165
ORF1ab/nsp3342H342YCatTat44AY.90.00027
ORF1ab/nsp3342H342YCatTat44B.1.1.250.002274
ORF1ab/nsp3342H342YCatTat44B.1.1.280.001245
ORF1ab/nsp3342H342YCatTat44B.1.177.620.004768
ORF1ab/nsp3342H342YCatTat44B.1.177.70.000659
ORF1ab/nsp3342H342YCatTat44B.1.351.30.003506
ORF1ab/nsp3342H342YCatTat44B.1.36.80.004
ORF1ab/nsp3342H342YCatTat44B.1.3890.004008
ORF1ab/nsp3342H342YCatTat44B.1.617.10.000516
ORF1ab/nsp3342H342YCatTat44Q.30.00058
ORF1ab/nsp3342H342YCatTat44Q.80.00066
ORF1ab/nsp3342H342YCatTat33AU.20.007264
ORF1ab/nsp3342H342YCatTat33AY.350.000699
ORF1ab/nsp3342H342YCatTat33AY.460.000312
ORF1ab/nsp3342H342YCatTat33AY.46.50.000595
ORF1ab/nsp3342H342YCatTat33AY.5.40.00083
ORF1ab/nsp3342H342YCatTat33AY.680.000821
ORF1ab/nsp3342H342YCatTat33AY.75.10.000541
ORF1ab/nsp3342H342YCatTat33AY.9.20.00011
ORF1ab/nsp3342H342YCatTat33AY.920.000862
ORF1ab/nsp3342H342YCatTat33AY.980.000237
ORF1ab/nsp3342H342YCatTat33AY.98.10.000145
ORF1ab/nsp3342H342YCatTat33B.1.1.1280.021277
ORF1ab/nsp3342H342YCatTat33B.1.1.1860.010309
ORF1ab/nsp3342H342YCatTat33B.1.1.5210.016043
ORF1ab/nsp3342H342YCatTat33B.1.1040.01107
ORF1ab/nsp3342H342YCatTat33B.1.110.30.002155
ORF1ab/nsp3342H342YCatTat33B.1.177.230.009709
ORF1ab/nsp3342H342YCatTat33B.1.2650.003812
ORF1ab/nsp3342H342YCatTat33B.1.36.20.032258
ORF1ab/nsp3342H342YCatTat33B.1.36.210.006479
ORF1ab/nsp3342H342YCatTat33B.1.4710.008197
ORF1ab/nsp3342H342YCatTat33B.1.621.10.001517
ORF1ab/nsp3342H342YCatTat33D.20.000225
ORF1ab/nsp3342H342YCatTat33P.30.004785
ORF1ab/nsp3342H342YCatTat33R.10.00027
ORF1ab/nsp3342H342YCatTat22A.210.00554
ORF1ab/nsp3342H342YCatTat22AY.1210.000271
ORF1ab/nsp3342H342YCatTat22AY.190.002281
ORF1ab/nsp3342H342YCatTat22AY.320.001065
ORF1ab/nsp3342H342YCatTat22AY.34.10.00102
ORF1ab/nsp3342H342YCatTat22AY.4.50.000215
ORF1ab/nsp3342H342YCatTat22AY.46.20.001271
ORF1ab/nsp3342H342YCatTat22AY.540.000191
ORF1ab/nsp3342H342YCatTat22AY.70.000392
ORF1ab/nsp3342H342YCatTat22AY.740.000231
ORF1ab/nsp3342H342YCatTat22AY.840.000875
ORF1ab/nsp3342H342YCatTat22AY.880.001768
ORF1ab/nsp3342H342YCatTat22B.1.1.100.00223
ORF1ab/nsp3342H342YCatTat22B.1.1.1570.001826
ORF1ab/nsp3342H342YCatTat22B.1.1.2440.030769
ORF1ab/nsp3342H342YCatTat22B.1.1.2770.001517
ORF1ab/nsp3342H342YCatTat22B.1.1.3110.000716
ORF1ab/nsp3342H342YCatTat22B.1.1.3720.001377
ORF1ab/nsp3342H342YCatTat22B.1.1.630.000772
ORF1ab/nsp3342H342YCatTat22B.1.1430.042553
ORF1ab/nsp3342H342YCatTat22B.1.177.50.002484
ORF1ab/nsp3342H342YCatTat22B.1.177.600.000437
ORF1ab/nsp3342H342YCatTat22B.1.177.830.002963
ORF1ab/nsp3342H342YCatTat22B.1.177.870.001456
ORF1ab/nsp3342H342YCatTat22B.1.2400.000431
ORF1ab/nsp3342H342YCatTat22B.1.36.360.001204
ORF1ab/nsp3342H342YCatTat22B.1.5270.007407
ORF1ab/nsp3342H342YCatTat22B.1.5800.00813
ORF1ab/nsp3342H342YCatTat22B.1.5950.000522
ORF1ab/nsp3342H342YCatTat22B.550.0059
ORF1ab/nsp3342H342YCatTat22C.160.002121
ORF1ab/nsp3342H342YCatTat22C.36.30.001134
ORF1ab/nsp3342H342YCatTat22P.1.10.000635
ORF1ab/nsp3342H342YCatTat22P.1.100.000539
ORF1ab/nsp3342H342YCatTat22P.20.000373
ORF1ab/nsp3342H342YCatTat110.055556
ORF1ab/nsp3342H342YCatTat11A0.000387
ORF1ab/nsp3342H342YCatTat11A.10.000282
ORF1ab/nsp3342H342YCatTat11A.270.001656
ORF1ab/nsp3342H342YCatTat11A.290.005319
ORF1ab/nsp3342H342YCatTat11AY.1060.000335
ORF1ab/nsp3342H342YCatTat11AY.110.001339
ORF1ab/nsp3342H342YCatTat11AY.1100.000113
ORF1ab/nsp3342H342YCatTat11AY.1140.000231
ORF1ab/nsp3342H342YCatTat11AY.1150.005208
ORF1ab/nsp3342H342YCatTat11AY.140.000088
ORF1ab/nsp3342H342YCatTat11AY.16.10.00047
ORF1ab/nsp3342H342YCatTat11AY.29.10.000221
ORF1ab/nsp3342H342YCatTat11AY.360.000148
ORF1ab/nsp3342H342YCatTat11AY.370.000316
ORF1ab/nsp3342H342YCatTat11AY.380.000499
ORF1ab/nsp3342H342YCatTat11AY.4.30.000842
ORF1ab/nsp3342H342YCatTat11AY.410.000294
ORF1ab/nsp3342H342YCatTat11AY.46.10.001027
ORF1ab/nsp3342H342YCatTat11AY.46.30.000934
ORF1ab/nsp3342H342YCatTat11AY.46.40.000165
ORF1ab/nsp3342H342YCatTat11AY.600.000938
ORF1ab/nsp3342H342YCatTat11AY.640.000595
ORF1ab/nsp3342H342YCatTat11AY.7.10.000113
ORF1ab/nsp3342H342YCatTat11AY.710.000475
ORF1ab/nsp3342H342YCatTat11AY.730.000665
ORF1ab/nsp3342H342YCatTat11AY.850.000427
ORF1ab/nsp3342H342YCatTat11AY.870.000833
ORF1ab/nsp3342H342YCatTat11AY.9.10.000084
ORF1ab/nsp3342H342YCatTat11AY.930.000273
ORF1ab/nsp3342H342YCatTat11B.1.1.10.000327
ORF1ab/nsp3342H342YCatTat11B.1.1.1000.04
ORF1ab/nsp3342H342YCatTat11B.1.1.1330.008475
ORF1ab/nsp3342H342YCatTat11B.1.1.1410.002012
ORF1ab/nsp3342H342YCatTat11B.1.1.150.013514
ORF1ab/nsp3342H342YCatTat11B.1.1.2000.007463
ORF1ab/nsp3342H342YCatTat11B.1.1.2410.00207
ORF1ab/nsp3342H342YCatTat11B.1.1.2550.00303
ORF1ab/nsp3342H342YCatTat11B.1.1.2580.003257
ORF1ab/nsp3342H342YCatTat11B.1.1.270.00565
ORF1ab/nsp3342H342YCatTat11B.1.1.2790.001121
ORF1ab/nsp3342H342YCatTat11B.1.1.2940.001266
ORF1ab/nsp3342H342YCatTat11B.1.1.3070.002532
ORF1ab/nsp3342H342YCatTat11B.1.1.3160.000925
ORF1ab/nsp3342H342YCatTat11B.1.1.3430.020833
ORF1ab/nsp3342H342YCatTat11B.1.1.3470.018182
ORF1ab/nsp3342H342YCatTat11B.1.1.3980.003226
ORF1ab/nsp3342H342YCatTat11B.1.1.4090.002833
ORF1ab/nsp3342H342YCatTat11B.1.1.410.006329
ORF1ab/nsp3342H342YCatTat11B.1.1.4190.007407
ORF1ab/nsp3342H342YCatTat11B.1.1.4340.000349
ORF1ab/nsp3342H342YCatTat11B.1.1.4660.008696
ORF1ab/nsp3342H342YCatTat11B.1.1.5170.006803
ORF1ab/nsp3342H342YCatTat11B.1.1.5230.001563
ORF1ab/nsp3342H342YCatTat11B.1.1.700.000341
ORF1ab/nsp3342H342YCatTat11B.1.1280.000635
ORF1ab/nsp3342H342YCatTat11B.1.1460.004237
ORF1ab/nsp3342H342YCatTat11B.1.1470.000756
ORF1ab/nsp3342H342YCatTat11B.1.160.160.000929
ORF1ab/nsp3342H342YCatTat11B.1.177.170.000821
ORF1ab/nsp3342H342YCatTat11B.1.177.40.000211
ORF1ab/nsp3342H342YCatTat11B.1.177.440.000519
ORF1ab/nsp3342H342YCatTat11B.1.177.540.000606
ORF1ab/nsp3342H342YCatTat11B.1.177.560.000668
ORF1ab/nsp3342H342YCatTat11B.1.177.770.000726
ORF1ab/nsp3342H342YCatTat11B.1.177.860.000183
ORF1ab/nsp3342H342YCatTat11B.1.1890.004292
ORF1ab/nsp3342H342YCatTat11B.1.2320.000537
ORF1ab/nsp3342H342YCatTat11B.1.2350.002519
ORF1ab/nsp3342H342YCatTat11B.1.2360.002053
ORF1ab/nsp3342H342YCatTat11B.1.258.110.000396
ORF1ab/nsp3342H342YCatTat11B.1.258.120.007874
ORF1ab/nsp3342H342YCatTat11B.1.258.30.001675
ORF1ab/nsp3342H342YCatTat11B.1.2980.002114
ORF1ab/nsp3342H342YCatTat11B.1.3050.002151
ORF1ab/nsp3342H342YCatTat11B.1.3200.001245
ORF1ab/nsp3342H342YCatTat11B.1.3280.03125
ORF1ab/nsp3342H342YCatTat11B.1.3490.000715
ORF1ab/nsp3342H342YCatTat11B.1.351.20.000303
ORF1ab/nsp3342H342YCatTat11B.1.36.10.00114
ORF1ab/nsp3342H342YCatTat11B.1.3610.001289
ORF1ab/nsp3342H342YCatTat11B.1.3690.000285
ORF1ab/nsp3342H342YCatTat11B.1.3710.001122
ORF1ab/nsp3342H342YCatTat11B.1.3960.000706
ORF1ab/nsp3342H342YCatTat11B.1.3990.001934
ORF1ab/nsp3342H342YCatTat11B.1.4080.00369
ORF1ab/nsp3342H342YCatTat11B.1.4160.001269
ORF1ab/nsp3342H342YCatTat11B.1.4220.000812
ORF1ab/nsp3342H342YCatTat11B.1.4250.002994
ORF1ab/nsp3342H342YCatTat11B.1.4330.003195
ORF1ab/nsp3342H342YCatTat11B.1.4390.005917
ORF1ab/nsp3342H342YCatTat11B.1.4530.003236
ORF1ab/nsp3342H342YCatTat11B.1.4560.003268
ORF1ab/nsp3342H342YCatTat11B.1.4590.004082
ORF1ab/nsp3342H342YCatTat11B.1.4620.007246
ORF1ab/nsp3342H342YCatTat11B.1.4800.002488
ORF1ab/nsp3342H342YCatTat11B.1.5010.007353
ORF1ab/nsp3342H342YCatTat11B.1.5170.000427
ORF1ab/nsp3342H342YCatTat11B.1.5380.008065
ORF1ab/nsp3342H342YCatTat11B.1.5390.017544
ORF1ab/nsp3342H342YCatTat11B.1.5410.004425
ORF1ab/nsp3342H342YCatTat11B.1.5510.00129
ORF1ab/nsp3342H342YCatTat11B.1.5630.016949
ORF1ab/nsp3342H342YCatTat11B.1.6200.000946
ORF1ab/nsp3342H342YCatTat11B.1.6310.003367
ORF1ab/nsp3342H342YCatTat11B.120.00641
ORF1ab/nsp3342H342YCatTat11B.290.003509
ORF1ab/nsp3342H342YCatTat11B.350.007812
ORF1ab/nsp3342H342YCatTat11B.400.000364
ORF1ab/nsp3342H342YCatTat11C.10.002392
ORF1ab/nsp3342H342YCatTat11C.170.055556
ORF1ab/nsp3342H342YCatTat11C.360.000911
ORF1ab/nsp3342H342YCatTat11P.1.120.000484
ORF1ab/nsp3342H342YCatTat11Q.70.001111