CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H342N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3342H342NH1160NnonsynCatAat17150.8823533743-3745
ORF1ab/nsp3342H342NH1160NnonsynCaTAaC1720.1176473743-3745

Details of the mutation H342N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3342H342NCatAat1517All0.000003
ORF1ab/nsp3342H342NCaTAaC217All0
ORF1ab/nsp3342H342NCatAat33AD.20.000657
ORF1ab/nsp3342H342NCaTAaC120.055556
ORF1ab/nsp3342H342NCatAat120.055556
ORF1ab/nsp3342H342NCatAat22AY.30.00002
ORF1ab/nsp3342H342NCatAat12B.1.10.000018
ORF1ab/nsp3342H342NCaTAaC12B.1.10.000018
ORF1ab/nsp3342H342NCatAat11AY.260.000028
ORF1ab/nsp3342H342NCatAat11AY.430.000004
ORF1ab/nsp3342H342NCatAat11AY.440.000006
ORF1ab/nsp3342H342NCatAat11AY.610.000105
ORF1ab/nsp3342H342NCatAat11B.1.1.70.000001
ORF1ab/nsp3342H342NCatAat11B.1.2220.001692
ORF1ab/nsp3342H342NCatAat11B.1.5250.000113
ORF1ab/nsp3342H342NCatAat11B.1.5960.000087