CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H342H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3342H342HH1160HsyncaTcaC1644164413743-3745

Details of the mutation H342H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3342H342HcaTcaC16441644All0.000314
ORF1ab/nsp3342H342HcaTcaC12641264B.1.1.5190.050195
ORF1ab/nsp3342H342HcaTcaC181181B.1.1.4640.266568
ORF1ab/nsp3342H342HcaTcaC3939AY.40.000061
ORF1ab/nsp3342H342HcaTcaC2222B.1.1.70.00002
ORF1ab/nsp3342H342HcaTcaC1818B.10.000165
ORF1ab/nsp3342H342HcaTcaC1515AY.430.000066
ORF1ab/nsp3342H342HcaTcaC1313P.10.000205
ORF1ab/nsp3342H342HcaTcaC1111B.1.10.0002
ORF1ab/nsp3342H342HcaTcaC99B.1.2580.000599
ORF1ab/nsp3342H342HcaTcaC77B.1.617.20.000026
ORF1ab/nsp3342H342HcaTcaC66AY.440.000037
ORF1ab/nsp3342H342HcaTcaC55AY.1030.000031
ORF1ab/nsp3342H342HcaTcaC55AY.30.00005
ORF1ab/nsp3342H342HcaTcaC55AY.390.000124
ORF1ab/nsp3342H342HcaTcaC44B.1.1770.000053
ORF1ab/nsp3342H342HcaTcaC22AY.590.001059
ORF1ab/nsp3342H342HcaTcaC22B.1.1.1610.007067
ORF1ab/nsp3342H342HcaTcaC22B.1.1.2220.000408
ORF1ab/nsp3342H342HcaTcaC22B.1.1.3060.000877
ORF1ab/nsp3342H342HcaTcaC22B.1.5260.000047
ORF1ab/nsp3342H342HcaTcaC22B.1.617.10.000258
ORF1ab/nsp3342H342HcaTcaC110.055556
ORF1ab/nsp3342H342HcaTcaC11AY.1140.000231
ORF1ab/nsp3342H342HcaTcaC11AY.250.000006
ORF1ab/nsp3342H342HcaTcaC11AY.260.000028
ORF1ab/nsp3342H342HcaTcaC11AY.420.00004
ORF1ab/nsp3342H342HcaTcaC11AY.470.000031
ORF1ab/nsp3342H342HcaTcaC11AY.60.000041
ORF1ab/nsp3342H342HcaTcaC11AY.700.000209
ORF1ab/nsp3342H342HcaTcaC11AY.840.000437
ORF1ab/nsp3342H342HcaTcaC11AY.900.000684
ORF1ab/nsp3342H342HcaTcaC11B.1.1.2690.001353
ORF1ab/nsp3342H342HcaTcaC11B.1.1.5260.003546
ORF1ab/nsp3342H342HcaTcaC11B.1.1600.000031
ORF1ab/nsp3342H342HcaTcaC11B.1.177.650.000665
ORF1ab/nsp3342H342HcaTcaC11B.1.177.790.002342
ORF1ab/nsp3342H342HcaTcaC11B.1.20.000009
ORF1ab/nsp3342H342HcaTcaC11B.1.3510.00003
ORF1ab/nsp3342H342HcaTcaC11B.1.3560.001727
ORF1ab/nsp3342H342HcaTcaC11B.1.36.290.000517
ORF1ab/nsp3342H342HcaTcaC11B.1.3690.000285
ORF1ab/nsp3342H342HcaTcaC11B.1.4040.001302
ORF1ab/nsp3342H342HcaTcaC11B.1.5250.000113
ORF1ab/nsp3342H342HcaTcaC11B.1.6210.000089
ORF1ab/nsp3342H342HcaTcaC11B.1.930.000934
ORF1ab/nsp3342H342HcaTcaC11D.20.000075
ORF1ab/nsp3342H342HcaTcaC11P.1.140.000048
ORF1ab/nsp3342H342HcaTcaC11P.1.170.000162
ORF1ab/nsp3342H342HcaTcaC11V.10.022727