CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H1307del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31307H1307delH2125deldelCAT---21821816638-6640

Details of the mutation H1307del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31307H1307delCAT---218218All0.000042
ORF1ab/nsp31307H1307delCAT---8989B.1.1.70.00008
ORF1ab/nsp31307H1307delCAT---2020AY.430.000089
ORF1ab/nsp31307H1307delCAT---1616B.1.617.20.00006
ORF1ab/nsp31307H1307delCAT---1212B.1.1770.000158
ORF1ab/nsp31307H1307delCAT---1111AY.40.000017
ORF1ab/nsp31307H1307delCAT---66AY.4.50.000645
ORF1ab/nsp31307H1307delCAT---55B.10.000046
ORF1ab/nsp31307H1307delCAT---44B.1.10.000073
ORF1ab/nsp31307H1307delCAT---33B.1.177.870.002183
ORF1ab/nsp31307H1307delCAT---22AY.250.000012
ORF1ab/nsp31307H1307delCAT---22AY.50.000041
ORF1ab/nsp31307H1307delCAT---22B.1.177.40.000422
ORF1ab/nsp31307H1307delCAT---22B.1.36.170.000988
ORF1ab/nsp31307H1307delCAT---11A0.000387
ORF1ab/nsp31307H1307delCAT---11AY.1160.000287
ORF1ab/nsp31307H1307delCAT---11AY.1200.000037
ORF1ab/nsp31307H1307delCAT---11AY.190.00114
ORF1ab/nsp31307H1307delCAT---11AY.360.000148
ORF1ab/nsp31307H1307delCAT---11AY.440.000006
ORF1ab/nsp31307H1307delCAT---11AY.460.000104
ORF1ab/nsp31307H1307delCAT---11AY.46.20.000635
ORF1ab/nsp31307H1307delCAT---11AY.470.000031
ORF1ab/nsp31307H1307delCAT---11AY.60.000041
ORF1ab/nsp31307H1307delCAT---11AY.600.000938
ORF1ab/nsp31307H1307delCAT---11AY.70.000196
ORF1ab/nsp31307H1307delCAT---11AY.720.001361
ORF1ab/nsp31307H1307delCAT---11AY.75.10.00018
ORF1ab/nsp31307H1307delCAT---11AY.90.000068
ORF1ab/nsp31307H1307delCAT---11AY.990.001049
ORF1ab/nsp31307H1307delCAT---11B.1.1.3110.000358
ORF1ab/nsp31307H1307delCAT---11B.1.1.3120.001912
ORF1ab/nsp31307H1307delCAT---11B.1.1.3480.000796
ORF1ab/nsp31307H1307delCAT---11B.1.1.370.000193
ORF1ab/nsp31307H1307delCAT---11B.1.1.4090.002833
ORF1ab/nsp31307H1307delCAT---11B.1.1600.000031
ORF1ab/nsp31307H1307delCAT---11B.1.177.110.001698
ORF1ab/nsp31307H1307delCAT---11B.1.177.150.000631
ORF1ab/nsp31307H1307delCAT---11B.1.177.170.000821
ORF1ab/nsp31307H1307delCAT---11B.1.177.510.004566
ORF1ab/nsp31307H1307delCAT---11B.1.177.560.000668
ORF1ab/nsp31307H1307delCAT---11B.1.177.580.001332
ORF1ab/nsp31307H1307delCAT---11B.1.177.60.000977
ORF1ab/nsp31307H1307delCAT---11B.1.177.690.001484
ORF1ab/nsp31307H1307delCAT---11B.1.177.70.000165
ORF1ab/nsp31307H1307delCAT---11B.1.177.90.001332
ORF1ab/nsp31307H1307delCAT---11B.1.20.000009
ORF1ab/nsp31307H1307delCAT---11B.1.258.100.011364
ORF1ab/nsp31307H1307delCAT---11B.1.258.110.000396
ORF1ab/nsp31307H1307delCAT---11B.1.3990.001934
ORF1ab/nsp31307H1307delCAT---11B.1.4090.000781
ORF1ab/nsp31307H1307delCAT---11B.1.6210.000089
ORF1ab/nsp31307H1307delCAT---11B.1.6300.005236
ORF1ab/nsp31307H1307delCAT---11P.10.000016
ORF1ab/nsp31307H1307delCAT---11P.1.150.000232
ORF1ab/nsp31307H1307delCAT---11Q.10.000126
ORF1ab/nsp31307H1307delCAT---11R.10.00009
ORF1ab/nsp31307H1307delCAT---11U.30.003861