CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H1307Q

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31307H1307QH2125QnonsyncaTcaA4423640.8235296638-6640
ORF1ab/nsp31307H1307QH2125QnonsyncaTcaG442780.1764716638-6640

Details of the mutation H1307Q within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31307H1307QcaTcaA364442All0.00007
ORF1ab/nsp31307H1307QcaTcaG78442All0.000015
ORF1ab/nsp31307H1307QcaTcaA171171B.1.5670.57
ORF1ab/nsp31307H1307QcaTcaA6273B.1.1.70.000056
ORF1ab/nsp31307H1307QcaTcaG1173B.1.1.70.00001
ORF1ab/nsp31307H1307QcaTcaG3561AY.40.000054
ORF1ab/nsp31307H1307QcaTcaA2661AY.40.00004
ORF1ab/nsp31307H1307QcaTcaA2020AY.250.00012
ORF1ab/nsp31307H1307QcaTcaA1919AY.4.50.002042
ORF1ab/nsp31307H1307QcaTcaG1717AY.810.033865
ORF1ab/nsp31307H1307QcaTcaA1515B.1.10.000272
ORF1ab/nsp31307H1307QcaTcaG88AY.1180.000501
ORF1ab/nsp31307H1307QcaTcaA66B.1.5950.001566
ORF1ab/nsp31307H1307QcaTcaA55AY.90.000338
ORF1ab/nsp31307H1307QcaTcaA55B.10.000046
ORF1ab/nsp31307H1307QcaTcaA33AY.80.001818
ORF1ab/nsp31307H1307QcaTcaA33B.1.5960.000261
ORF1ab/nsp31307H1307QcaTcaA23B.1.617.20.000008
ORF1ab/nsp31307H1307QcaTcaG13B.1.617.20.000004
ORF1ab/nsp31307H1307QcaTcaA22AY.120.10.000642
ORF1ab/nsp31307H1307QcaTcaA22AY.200.000078
ORF1ab/nsp31307H1307QcaTcaA22AY.30.00002
ORF1ab/nsp31307H1307QcaTcaA22AY.430.000009
ORF1ab/nsp31307H1307QcaTcaG22B.1.1.2840.000215
ORF1ab/nsp31307H1307QcaTcaA22B.1.1600.000062
ORF1ab/nsp31307H1307QcaTcaA22B.1.36.170.000988
ORF1ab/nsp31307H1307QcaTcaG11A.2.50.000499
ORF1ab/nsp31307H1307QcaTcaG11AY.1030.000006
ORF1ab/nsp31307H1307QcaTcaG11AY.1170.000085
ORF1ab/nsp31307H1307QcaTcaA11AY.1200.000037
ORF1ab/nsp31307H1307QcaTcaA11AY.170.008197
ORF1ab/nsp31307H1307QcaTcaA11AY.420.00004
ORF1ab/nsp31307H1307QcaTcaA11AY.580.000907
ORF1ab/nsp31307H1307QcaTcaA11AY.870.000833
ORF1ab/nsp31307H1307QcaTcaA11AY.9.20.000037
ORF1ab/nsp31307H1307QcaTcaA11B.1.1.390.00051
ORF1ab/nsp31307H1307QcaTcaA11B.1.1.4090.002833
ORF1ab/nsp31307H1307QcaTcaA11B.1.160.140.002119
ORF1ab/nsp31307H1307QcaTcaG11B.1.177.810.000189
ORF1ab/nsp31307H1307QcaTcaA11B.1.20.000009
ORF1ab/nsp31307H1307QcaTcaA11B.1.36.80.001
ORF1ab/nsp31307H1307QcaTcaA11B.1.4970.000315
ORF1ab/nsp31307H1307QcaTcaA11B.1.9.50.005682
ORF1ab/nsp31307H1307QcaTcaA11P.1.150.000232
ORF1ab/nsp31307H1307QcaTcaA11Q.10.000126