CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = H1274Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31274H1274YH2092YnonsynCacTac24712246960.9993536539-6541
ORF1ab/nsp31274H1274YH2092YnonsynCaCTaT24712160.0006474596539-6541

Details of the mutation H1274Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31274H1274YCacTac2469624712All0.004723
ORF1ab/nsp31274H1274YCaCTaT1624712All0.000003
ORF1ab/nsp31274H1274YCacTac1046910471B.1.617.20.03942
ORF1ab/nsp31274H1274YCaCTaT210471B.1.617.20.000008
ORF1ab/nsp31274H1274YCacTac22672267AY.300.897111
ORF1ab/nsp31274H1274YCacTac20592060B.1.1.70.001843
ORF1ab/nsp31274H1274YCaCTaT12060B.1.1.70.000001
ORF1ab/nsp31274H1274YCacTac948949AY.40.001475
ORF1ab/nsp31274H1274YCaCTaT1949AY.40.000002
ORF1ab/nsp31274H1274YCacTac820820AY.400.790743
ORF1ab/nsp31274H1274YCacTac707707B.10.006476
ORF1ab/nsp31274H1274YCacTac448448B.1.1270.984615
ORF1ab/nsp31274H1274YCacTac430430Q.30.062364
ORF1ab/nsp31274H1274YCacTac324324B.1.2430.022545
ORF1ab/nsp31274H1274YCacTac306306AY.9.20.011239
ORF1ab/nsp31274H1274YCacTac288288AY.4.20.006246
ORF1ab/nsp31274H1274YCacTac270270AY.430.001196
ORF1ab/nsp31274H1274YCacTac252252AY.50.005204
ORF1ab/nsp31274H1274YCacTac251251AY.700.052335
ORF1ab/nsp31274H1274YCacTac229229B.1.20.002016
ORF1ab/nsp31274H1274YCacTac228228AY.1030.001416
ORF1ab/nsp31274H1274YCacTac190190AY.60.007814
ORF1ab/nsp31274H1274YCacTac167167AY.30.001661
ORF1ab/nsp31274H1274YCacTac139139AY.440.000846
ORF1ab/nsp31274H1274YCacTac131131A0.050697
ORF1ab/nsp31274H1274YCacTac126126AY.390.003114
ORF1ab/nsp31274H1274YCacTac116116AY.16.10.054511
ORF1ab/nsp31274H1274YCacTac115116AY.610.012049
ORF1ab/nsp31274H1274YCaCTaT1116AY.610.000105
ORF1ab/nsp31274H1274YCacTac110110B.1.1770.001448
ORF1ab/nsp31274H1274YCacTac105105B.1.1600.003275
ORF1ab/nsp31274H1274YCacTac9696AY.680.02628
ORF1ab/nsp31274H1274YCacTac9393B.1.10.001687
ORF1ab/nsp31274H1274YCacTac8181AY.740.009367
ORF1ab/nsp31274H1274YCacTac8080B.1.5341
ORF1ab/nsp31274H1274YCacTac7577AY.250.000451
ORF1ab/nsp31274H1274YCaCTaT277AY.250.000012
ORF1ab/nsp31274H1274YCacTac7274P.10.001134
ORF1ab/nsp31274H1274YCaCTaT274P.10.000032
ORF1ab/nsp31274H1274YCacTac7070AY.1020.001856
ORF1ab/nsp31274H1274YCacTac6868B.1.1.5190.0027
ORF1ab/nsp31274H1274YCacTac5959AY.260.00167
ORF1ab/nsp31274H1274YCacTac5959B.1.3510.001754
ORF1ab/nsp31274H1274YCacTac5757AY.470.001773
ORF1ab/nsp31274H1274YCacTac5757AY.750.003193
ORF1ab/nsp31274H1274YCacTac5757B.1.5250.00645
ORF1ab/nsp31274H1274YCacTac5656AY.130.009015
ORF1ab/nsp31274H1274YCacTac5456B.1.4290.001271
ORF1ab/nsp31274H1274YCaCTaT256B.1.4290.000047
ORF1ab/nsp31274H1274YCacTac5454AY.200.002099
ORF1ab/nsp31274H1274YCacTac4848AY.310.888889
ORF1ab/nsp31274H1274YCacTac4848AY.650.025586
ORF1ab/nsp31274H1274YCacTac4646B.1.5240.064698
ORF1ab/nsp31274H1274YCacTac4646B.1.5260.001081
ORF1ab/nsp31274H1274YCacTac4545P.20.008399
ORF1ab/nsp31274H1274YCacTac4444AY.290.000694
ORF1ab/nsp31274H1274YCacTac4343AY.75.10.007753
ORF1ab/nsp31274H1274YCacTac4243B.1.177.860.007705
ORF1ab/nsp31274H1274YCaCTaT143B.1.177.860.000183
ORF1ab/nsp31274H1274YCacTac4242AY.46.60.003033
ORF1ab/nsp31274H1274YCacTac4040AY.340.003879
ORF1ab/nsp31274H1274YCacTac3636AY.560.057785
ORF1ab/nsp31274H1274YCacTac3333B.1.4270.001666
ORF1ab/nsp31274H1274YCacTac3232B.1.910.06639
ORF1ab/nsp31274H1274YCacTac3131AY.1210.004195
ORF1ab/nsp31274H1274YCacTac3030AY.590.01589
ORF1ab/nsp31274H1274YCacTac2929AY.9.10.002428
ORF1ab/nsp31274H1274YCacTac2929B.1.1.2840.003115
ORF1ab/nsp31274H1274YCacTac2828AY.490.089457
ORF1ab/nsp31274H1274YCacTac2828B.1.221.30.023333
ORF1ab/nsp31274H1274YCacTac2727AY.540.002574
ORF1ab/nsp31274H1274YCacTac2627D.20.001951
ORF1ab/nsp31274H1274YCaCTaT127D.20.000075
ORF1ab/nsp31274H1274YCacTac2626AY.39.10.00103
ORF1ab/nsp31274H1274YCacTac2323B.1.2580.001531
ORF1ab/nsp31274H1274YCacTac2222AY.1200.000818
ORF1ab/nsp31274H1274YCacTac2222B.1.1.470.117647
ORF1ab/nsp31274H1274YCacTac2222C.370.002553
ORF1ab/nsp31274H1274YCacTac2121B.1.2631
ORF1ab/nsp31274H1274YCacTac1921B.1.438.10.002038
ORF1ab/nsp31274H1274YCaCTaT221B.1.438.10.000215
ORF1ab/nsp31274H1274YCacTac2020AY.1170.00169
ORF1ab/nsp31274H1274YCacTac2020AY.460.002082
ORF1ab/nsp31274H1274YCacTac1919AY.450.002312
ORF1ab/nsp31274H1274YCacTac1919AY.910.013879
ORF1ab/nsp31274H1274YCacTac1818AY.330.001202
ORF1ab/nsp31274H1274YCacTac1818B.1.177.180.020882
ORF1ab/nsp31274H1274YCacTac1818B.1.5950.004697
ORF1ab/nsp31274H1274YCacTac1717C.1.20.07234
ORF1ab/nsp31274H1274YCacTac1616AY.520.013029
ORF1ab/nsp31274H1274YCacTac1616B.1.619.10.010263
ORF1ab/nsp31274H1274YCacTac1515AY.230.001046
ORF1ab/nsp31274H1274YCacTac1515AY.420.000603
ORF1ab/nsp31274H1274YCacTac1515AY.550.013761
ORF1ab/nsp31274H1274YCacTac1515B.1.351.20.004539
ORF1ab/nsp31274H1274YCacTac1414AY.160.005315
ORF1ab/nsp31274H1274YCacTac1414AY.370.004425
ORF1ab/nsp31274H1274YCacTac1414B.1.1.2620.212121
ORF1ab/nsp31274H1274YCacTac1313AY.580.011797
ORF1ab/nsp31274H1274YCacTac1313AY.980.001027
ORF1ab/nsp31274H1274YCacTac1313B.1.4260.013118
ORF1ab/nsp31274H1274YCacTac1313B.1.5170.005551
ORF1ab/nsp31274H1274YCacTac1212AY.270.000777
ORF1ab/nsp31274H1274YCacTac1212AY.410.003527
ORF1ab/nsp31274H1274YCacTac1212AY.530.00345
ORF1ab/nsp31274H1274YCacTac1212AY.620.005229
ORF1ab/nsp31274H1274YCacTac1212AY.7.10.001352
ORF1ab/nsp31274H1274YCacTac1212B.1.1.610.105263
ORF1ab/nsp31274H1274YCacTac1212B.1.177.120.00182
ORF1ab/nsp31274H1274YCacTac1212B.1.5960.001046
ORF1ab/nsp31274H1274YCacTac1111AY.1190.000388
ORF1ab/nsp31274H1274YCacTac1111P.1.120.005324
ORF1ab/nsp31274H1274YCacTac1010AY.1000.00046
ORF1ab/nsp31274H1274YCacTac1010AY.1180.000626
ORF1ab/nsp31274H1274YCacTac1010AY.240.00431
ORF1ab/nsp31274H1274YCacTac1010AY.280.018904
ORF1ab/nsp31274H1274YCacTac1010AY.850.004272
ORF1ab/nsp31274H1274YCacTac1010AY.860.008299
ORF1ab/nsp31274H1274YCacTac1010AY.98.10.000484
ORF1ab/nsp31274H1274YCacTac1010B.1.177.560.006676
ORF1ab/nsp31274H1274YCacTac1010B.1.5670.033333
ORF1ab/nsp31274H1274YCacTac1010C.360.009107
ORF1ab/nsp31274H1274YCacTac99AY.1160.002581
ORF1ab/nsp31274H1274YCacTac99AY.190.010262
ORF1ab/nsp31274H1274YCacTac99AY.670.004178
ORF1ab/nsp31274H1274YCacTac99P.1.140.00043
ORF1ab/nsp31274H1274YCacTac88AD.20.001752
ORF1ab/nsp31274H1274YCacTac88AY.99.20.000737
ORF1ab/nsp31274H1274YCacTac78B.1.360.001021
ORF1ab/nsp31274H1274YCaCTaT18B.1.360.000146
ORF1ab/nsp31274H1274YCacTac88B.1.5610.003176
ORF1ab/nsp31274H1274YCacTac88B.1.6090.003835
ORF1ab/nsp31274H1274YCacTac88B.1.617.10.001032
ORF1ab/nsp31274H1274YCacTac88C.36.30.004538
ORF1ab/nsp31274H1274YCacTac77AY.1070.003262
ORF1ab/nsp31274H1274YCacTac77AY.510.006364
ORF1ab/nsp31274H1274YCacTac77AY.920.002011
ORF1ab/nsp31274H1274YCacTac77B.1.1.2140.000388
ORF1ab/nsp31274H1274YCacTac77B.1.1.4320.008861
ORF1ab/nsp31274H1274YCacTac77B.1.258.170.000728
ORF1ab/nsp31274H1274YCacTac66AY.100.00318
ORF1ab/nsp31274H1274YCacTac66AY.46.40.000987
ORF1ab/nsp31274H1274YCacTac66AY.90.000406
ORF1ab/nsp31274H1274YCacTac66AZ.20.004926
ORF1ab/nsp31274H1274YCacTac66B.1.1.10.00196
ORF1ab/nsp31274H1274YCacTac66B.1.1.280.001867
ORF1ab/nsp31274H1274YCacTac66B.1.1.3180.001811
ORF1ab/nsp31274H1274YCacTac66B.1.177.820.002864
ORF1ab/nsp31274H1274YCacTac66B.1.2210.000426
ORF1ab/nsp31274H1274YCacTac66B.1.466.20.002347
ORF1ab/nsp31274H1274YCacTac66B.1.5750.00182
ORF1ab/nsp31274H1274YCacTac66B.1.6190.005226
ORF1ab/nsp31274H1274YCacTac66B.1.6280.002114
ORF1ab/nsp31274H1274YCacTac55AY.320.002662
ORF1ab/nsp31274H1274YCacTac55AY.480.002326
ORF1ab/nsp31274H1274YCacTac55AY.640.002976
ORF1ab/nsp31274H1274YCacTac55AY.710.002375
ORF1ab/nsp31274H1274YCacTac55AY.800.005643
ORF1ab/nsp31274H1274YCacTac55AY.840.002187
ORF1ab/nsp31274H1274YCacTac55B.1.1.2220.00102
ORF1ab/nsp31274H1274YCacTac55B.1.1.330.002104
ORF1ab/nsp31274H1274YCacTac55B.1.177.670.038168
ORF1ab/nsp31274H1274YCacTac55B.1.177.80.003762
ORF1ab/nsp31274H1274YCacTac55B.1.36.10.005701
ORF1ab/nsp31274H1274YCacTac55Q.80.000825
ORF1ab/nsp31274H1274YCacTac44AY.1040.007937
ORF1ab/nsp31274H1274YCacTac44AY.1060.00134
ORF1ab/nsp31274H1274YCacTac44AY.1100.000451
ORF1ab/nsp31274H1274YCacTac44AY.140.000352
ORF1ab/nsp31274H1274YCacTac44AY.380.001997
ORF1ab/nsp31274H1274YCacTac44AY.4.2.10.000596
ORF1ab/nsp31274H1274YCacTac44AY.5.40.001107
ORF1ab/nsp31274H1274YCacTac44AY.7.20.002237
ORF1ab/nsp31274H1274YCacTac44AY.730.002661
ORF1ab/nsp31274H1274YCacTac44AY.770.00451
ORF1ab/nsp31274H1274YCacTac44B.1.1.370.000771
ORF1ab/nsp31274H1274YCacTac44B.1.1.700.001364
ORF1ab/nsp31274H1274YCacTac44B.1.1700.017241
ORF1ab/nsp31274H1274YCacTac44B.1.177.420.003578
ORF1ab/nsp31274H1274YCacTac44B.1.2140.014652
ORF1ab/nsp31274H1274YCacTac44B.1.258.30.0067
ORF1ab/nsp31274H1274YCacTac44B.1.3980.011905
ORF1ab/nsp31274H1274YCacTac44B.1.466.10.028777
ORF1ab/nsp31274H1274YCacTac44P.1.20.004624
ORF1ab/nsp31274H1274YCacTac44P.1.70.001277
ORF1ab/nsp31274H1274YCacTac44P.60.012579
ORF1ab/nsp31274H1274YCacTac44R.10.00036
ORF1ab/nsp31274H1274YCacTac33AY.1130.000427
ORF1ab/nsp31274H1274YCacTac33AY.1140.000693
ORF1ab/nsp31274H1274YCacTac33AY.210.005693
ORF1ab/nsp31274H1274YCacTac33AY.3.10.000256
ORF1ab/nsp31274H1274YCacTac33AY.500.002398
ORF1ab/nsp31274H1274YCacTac33AY.780.004622
ORF1ab/nsp31274H1274YCacTac33AY.80.001818
ORF1ab/nsp31274H1274YCacTac33B0.000383
ORF1ab/nsp31274H1274YCacTac33B.1.1.1700.003741
ORF1ab/nsp31274H1274YCacTac33B.1.1.500.002037
ORF1ab/nsp31274H1274YCacTac33B.1.1.710.018182
ORF1ab/nsp31274H1274YCacTac33B.1.1570.008955
ORF1ab/nsp31274H1274YCacTac33B.1.214.20.001799
ORF1ab/nsp31274H1274YCacTac33B.1.2250.046154
ORF1ab/nsp31274H1274YCacTac33B.1.2340.000396
ORF1ab/nsp31274H1274YCacTac33B.1.3400.012876
ORF1ab/nsp31274H1274YCacTac33B.1.3750.002459
ORF1ab/nsp31274H1274YCacTac33B.1.4000.001287
ORF1ab/nsp31274H1274YCacTac33B.1.5680.003333
ORF1ab/nsp31274H1274YCacTac33B.1.6370.000219
ORF1ab/nsp31274H1274YCacTac33C.160.003181
ORF1ab/nsp31274H1274YCacTac33C.170.166667
ORF1ab/nsp31274H1274YCacTac33P.1.100.000808
ORF1ab/nsp31274H1274YCacTac33P.1.150.000697
ORF1ab/nsp31274H1274YCacTac22A.2.50.000998
ORF1ab/nsp31274H1274YCacTac22AY.1050.001286
ORF1ab/nsp31274H1274YCacTac22AY.1090.001479
ORF1ab/nsp31274H1274YCacTac22AY.1110.000366
ORF1ab/nsp31274H1274YCacTac22AY.120.000632
ORF1ab/nsp31274H1274YCacTac22AY.120.20.002571
ORF1ab/nsp31274H1274YCacTac22AY.29.10.000441
ORF1ab/nsp31274H1274YCacTac22AY.360.000296
ORF1ab/nsp31274H1274YCacTac22AY.39.20.003082
ORF1ab/nsp31274H1274YCacTac22AY.4.50.000215
ORF1ab/nsp31274H1274YCacTac22AY.46.20.001271
ORF1ab/nsp31274H1274YCacTac22AY.5.30.000675
ORF1ab/nsp31274H1274YCacTac22AY.570.001312
ORF1ab/nsp31274H1274YCacTac22AZ.10.001735
ORF1ab/nsp31274H1274YCacTac22B.1.1.100.00223
ORF1ab/nsp31274H1274YCacTac22B.1.1.1810.009091
ORF1ab/nsp31274H1274YCacTac22B.1.1.2650.006309
ORF1ab/nsp31274H1274YCacTac22B.1.1.3110.000716
ORF1ab/nsp31274H1274YCacTac22B.1.1.3680.006173
ORF1ab/nsp31274H1274YCacTac22B.1.1.3890.012121
ORF1ab/nsp31274H1274YCacTac22B.1.1.390.001019
ORF1ab/nsp31274H1274YCacTac22B.1.1.3970.004505
ORF1ab/nsp31274H1274YCacTac22B.1.1.4340.000697
ORF1ab/nsp31274H1274YCacTac22B.1.110.30.001437
ORF1ab/nsp31274H1274YCacTac22B.1.1470.001512
ORF1ab/nsp31274H1274YCacTac22B.1.177.240.002591
ORF1ab/nsp31274H1274YCacTac22B.1.177.40.000422
ORF1ab/nsp31274H1274YCacTac22B.1.177.440.001038
ORF1ab/nsp31274H1274YCacTac22B.1.177.730.001133
ORF1ab/nsp31274H1274YCacTac22B.1.177.810.000379
ORF1ab/nsp31274H1274YCacTac22B.1.177.890.04878
ORF1ab/nsp31274H1274YCacTac22B.1.2320.001075
ORF1ab/nsp31274H1274YCacTac22B.1.2400.000431
ORF1ab/nsp31274H1274YCacTac22B.1.2650.002541
ORF1ab/nsp31274H1274YCacTac22B.1.3130.013158
ORF1ab/nsp31274H1274YCacTac22B.1.3560.003454
ORF1ab/nsp31274H1274YCacTac22B.1.3960.001411
ORF1ab/nsp31274H1274YCacTac22B.1.5090.001732
ORF1ab/nsp31274H1274YCacTac22B.1.5600.009259
ORF1ab/nsp31274H1274YCacTac22B.1.5650.001621
ORF1ab/nsp31274H1274YCacTac22B.1.5990.007299
ORF1ab/nsp31274H1274YCacTac22B.1.6210.000177
ORF1ab/nsp31274H1274YCacTac22B.1.6250.004706
ORF1ab/nsp31274H1274YCacTac22B.1.88.10.009615
ORF1ab/nsp31274H1274YCacTac22P.1.170.000324
ORF1ab/nsp31274H1274YCacTac22P.30.00319
ORF1ab/nsp31274H1274YCacTac22Q.10.000253
ORF1ab/nsp31274H1274YCacTac110.055556
ORF1ab/nsp31274H1274YCacTac11A.20.000662
ORF1ab/nsp31274H1274YCacTac11AM.40.003571
ORF1ab/nsp31274H1274YCacTac11AP.10.001502
ORF1ab/nsp31274H1274YCacTac11AU.10.001266
ORF1ab/nsp31274H1274YCacTac11AU.30.00211
ORF1ab/nsp31274H1274YCacTac11AY.1080.001103
ORF1ab/nsp31274H1274YCacTac11AY.110.001339
ORF1ab/nsp31274H1274YCacTac11AY.23.10.000417
ORF1ab/nsp31274H1274YCacTac11AY.34.10.00051
ORF1ab/nsp31274H1274YCacTac11AY.46.50.000198
ORF1ab/nsp31274H1274YCacTac11AY.600.000938
ORF1ab/nsp31274H1274YCacTac11AY.630.000387
ORF1ab/nsp31274H1274YCacTac11AY.690.000187
ORF1ab/nsp31274H1274YCacTac11AY.790.001211
ORF1ab/nsp31274H1274YCacTac11AY.810.001992
ORF1ab/nsp31274H1274YCacTac11AY.830.001724
ORF1ab/nsp31274H1274YCacTac11AY.870.000833
ORF1ab/nsp31274H1274YCacTac11AY.880.000884
ORF1ab/nsp31274H1274YCacTac11AY.950.000761
ORF1ab/nsp31274H1274YCacTac11AY.990.001049
ORF1ab/nsp31274H1274YCacTac11AY.99.10.001553
ORF1ab/nsp31274H1274YCacTac11B.1.1.1110.014706
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