CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = G251V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3251G251VG1069VnonsyngGagTa1161150.9913793470-3472
ORF1ab/nsp3251G251VG1069VnonsyngGAgTG11610.008620693470-3472

Details of the mutation G251V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3251G251VgGagTa115116All0.000022
ORF1ab/nsp3251G251VgGAgTG1116All0
ORF1ab/nsp3251G251VgGagTa1920AY.1030.000118
ORF1ab/nsp3251G251VgGAgTG120AY.1030.000006
ORF1ab/nsp3251G251VgGagTa1313B.10.000119
ORF1ab/nsp3251G251VgGagTa99B.1.1.70.000008
ORF1ab/nsp3251G251VgGagTa88R.10.00072
ORF1ab/nsp3251G251VgGagTa77AY.40.000011
ORF1ab/nsp3251G251VgGagTa66AY.460.000624
ORF1ab/nsp3251G251VgGagTa55AY.330.000334
ORF1ab/nsp3251G251VgGagTa44B.1.617.20.000015
ORF1ab/nsp3251G251VgGagTa33AY.1190.000106
ORF1ab/nsp3251G251VgGagTa33AY.250.000018
ORF1ab/nsp3251G251VgGagTa33B.1.4270.000151
ORF1ab/nsp3251G251VgGagTa33P.10.000047
ORF1ab/nsp3251G251VgGagTa22AB.10.016393
ORF1ab/nsp3251G251VgGagTa22AY.1170.000169
ORF1ab/nsp3251G251VgGagTa22AY.380.000999
ORF1ab/nsp3251G251VgGagTa22B.1.1770.000026
ORF1ab/nsp3251G251VgGagTa22B.1.20.000018
ORF1ab/nsp3251G251VgGagTa22B.1.3690.00057
ORF1ab/nsp3251G251VgGagTa22B.1.466.20.000782
ORF1ab/nsp3251G251VgGagTa22D.20.00015
ORF1ab/nsp3251G251VgGagTa11A0.000387
ORF1ab/nsp3251G251VgGagTa11AY.1130.000142
ORF1ab/nsp3251G251VgGagTa11AY.260.000028
ORF1ab/nsp3251G251VgGagTa11AY.30.00001
ORF1ab/nsp3251G251VgGagTa11AY.4.20.000022
ORF1ab/nsp3251G251VgGagTa11AY.4.2.10.000149
ORF1ab/nsp3251G251VgGagTa11AY.430.000004
ORF1ab/nsp3251G251VgGagTa11AY.470.000031
ORF1ab/nsp3251G251VgGagTa11AY.9.20.000037
ORF1ab/nsp3251G251VgGagTa11AY.980.000079
ORF1ab/nsp3251G251VgGagTa11B.1.1.2800.003086
ORF1ab/nsp3251G251VgGagTa11B.1.1.5190.00004
ORF1ab/nsp3251G251VgGagTa11B.1.1.700.000341
ORF1ab/nsp3251G251VgGagTa11B.1.2790.000514
ORF1ab/nsp3251G251VgGagTa11B.1.4160.001269
ORF1ab/nsp3251G251VgGagTa11B.1.4970.000315

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

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