CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = F460L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3460F460LF1278LnonsynTtcCtc43280.6511634097-4099
ORF1ab/nsp3460F460LF1278LnonsynttCttA43120.279074097-4099
ORF1ab/nsp3460F460LF1278LnonsynttCttG4320.04651164097-4099
ORF1ab/nsp3460F460LF1278LnonsynTtCCtT4310.02325584097-4099

Details of the mutation F460L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3460F460LTtcCtc2843All0.000005
ORF1ab/nsp3460F460LttCttA1243All0.000002
ORF1ab/nsp3460F460LttCttG243All0
ORF1ab/nsp3460F460LTtCCtT143All0
ORF1ab/nsp3460F460LTtcCtc67B.1.1.70.000005
ORF1ab/nsp3460F460LttCttA17B.1.1.70.000001
ORF1ab/nsp3460F460LttCttA77P.10.00011
ORF1ab/nsp3460F460LTtcCtc55AY.30.00005
ORF1ab/nsp3460F460LTtcCtc44AY.40.000006
ORF1ab/nsp3460F460LTtCCtT120.055556
ORF1ab/nsp3460F460LTtcCtc120.055556
ORF1ab/nsp3460F460LTtcCtc22AY.250.000012
ORF1ab/nsp3460F460LttCttA22B.10.000018
ORF1ab/nsp3460F460LttCttG22B.1.160.70.004158
ORF1ab/nsp3460F460LTtcCtc12B.1.4290.000024
ORF1ab/nsp3460F460LttCttA12B.1.4290.000024
ORF1ab/nsp3460F460LTtcCtc11AY.330.000067
ORF1ab/nsp3460F460LTtcCtc11AY.460.000104
ORF1ab/nsp3460F460LTtcCtc11B.1.1.1210.002427
ORF1ab/nsp3460F460LTtcCtc11B.1.1.2140.000055
ORF1ab/nsp3460F460LTtcCtc11B.1.160.260.002421
ORF1ab/nsp3460F460LTtcCtc11B.1.20.000009
ORF1ab/nsp3460F460LTtcCtc11B.1.2360.002053
ORF1ab/nsp3460F460LTtcCtc11B.1.3690.000285
ORF1ab/nsp3460F460LTtcCtc11B.1.617.20.000004
ORF1ab/nsp3460F460LttCttA11Q.10.000126