CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = F1516del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31516F1516del1F2334del1delTtc-tc320.6666677265-7267
ORF1ab/nsp31516F1516del1F2334del1delttCtt-310.3333337265-7267

Details of the mutation F1516del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31516F1516del1Ttc-tc23All0
ORF1ab/nsp31516F1516del1ttCtt-13All0
ORF1ab/nsp31516F1516del1ttCtt-11AY.540.000095
ORF1ab/nsp31516F1516del1Ttc-tc11AY.670.000464
ORF1ab/nsp31516F1516del1Ttc-tc11B.1.1.70.000001