CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = F1516del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31516F1516delF2334deldelTTC---747417265-7267

Details of the mutation F1516del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31516F1516delTTC---7474All0.000014
ORF1ab/nsp31516F1516delTTC---1313B.1.1.70.000012
ORF1ab/nsp31516F1516delTTC---66B.1.617.20.000023
ORF1ab/nsp31516F1516delTTC---44B.10.000037
ORF1ab/nsp31516F1516delTTC---44B.1.10.000073
ORF1ab/nsp31516F1516delTTC---33B.1.1770.00004
ORF1ab/nsp31516F1516delTTC---33B.1.4110.011111
ORF1ab/nsp31516F1516delTTC---220.111111
ORF1ab/nsp31516F1516delTTC---22AY.40.000003
ORF1ab/nsp31516F1516delTTC---22AY.420.00008
ORF1ab/nsp31516F1516delTTC---22AY.430.000009
ORF1ab/nsp31516F1516delTTC---22AY.9.20.000073
ORF1ab/nsp31516F1516delTTC---22B.1.1.2180.015385
ORF1ab/nsp31516F1516delTTC---22B.1.177.620.002384
ORF1ab/nsp31516F1516delTTC---22B.1.617.10.000258
ORF1ab/nsp31516F1516delTTC---11AD.20.000219
ORF1ab/nsp31516F1516delTTC---11AY.1010.00049
ORF1ab/nsp31516F1516delTTC---11AY.1200.000037
ORF1ab/nsp31516F1516delTTC---11AY.250.000006
ORF1ab/nsp31516F1516delTTC---11AY.360.000148
ORF1ab/nsp31516F1516delTTC---11AY.4.30.000842
ORF1ab/nsp31516F1516delTTC---11AY.4.50.000107
ORF1ab/nsp31516F1516delTTC---11AY.440.000006
ORF1ab/nsp31516F1516delTTC---11AY.50.000021
ORF1ab/nsp31516F1516delTTC---11AY.660.00107
ORF1ab/nsp31516F1516delTTC---11AY.760.004831
ORF1ab/nsp31516F1516delTTC---11AY.840.000437
ORF1ab/nsp31516F1516delTTC---11AY.990.001049
ORF1ab/nsp31516F1516delTTC---11B.1.1.370.000193
ORF1ab/nsp31516F1516delTTC---11B.1.1.460.004367
ORF1ab/nsp31516F1516delTTC---11B.1.1.4640.001473
ORF1ab/nsp31516F1516delTTC---11B.1.1.5250.005464
ORF1ab/nsp31516F1516delTTC---11B.1.2100.002132
ORF1ab/nsp31516F1516delTTC---11B.1.4150.014286
ORF1ab/nsp31516F1516delTTC---11B.1.416.10.001563
ORF1ab/nsp31516F1516delTTC---11B.1.4530.003236
ORF1ab/nsp31516F1516delTTC---11B.1.5260.000024
ORF1ab/nsp31516F1516delTTC---11B.1.575.10.002439
ORF1ab/nsp31516F1516delTTC---11B.1.6210.000089
ORF1ab/nsp31516F1516delTTC---11P.1.150.000232