CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = F1405del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31405F1405del2F2223del2deltTTt--210.56932-6934
ORF1ab/nsp31405F1405del2F2223del2delTTt--t210.56932-6934

Details of the mutation F1405del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31405F1405del2tTTt--12All0
ORF1ab/nsp31405F1405del2TTt--t12All0
ORF1ab/nsp31405F1405del2TTt--t11AY.40.000002
ORF1ab/nsp31405F1405del2tTTt--11B.1.1.70.000001