CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = F1354F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31354F1354FF2172FsynttCttT8522852216779-6781

Details of the mutation F1354F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31354F1354FttCttT85228522All0.00163
ORF1ab/nsp31354F1354FttCttT18931893B.1.617.20.007128
ORF1ab/nsp31354F1354FttCttT12071207B.1.1.70.001081
ORF1ab/nsp31354F1354FttCttT852852AY.40.001326
ORF1ab/nsp31354F1354FttCttT493493AY.1030.003061
ORF1ab/nsp31354F1354FttCttT260260AY.430.001152
ORF1ab/nsp31354F1354FttCttT247247AY.390.006104
ORF1ab/nsp31354F1354FttCttT176176AY.470.005475
ORF1ab/nsp31354F1354FttCttT164164B.10.001502
ORF1ab/nsp31354F1354FttCttT161161B.1.5260.003784
ORF1ab/nsp31354F1354FttCttT159159B.1.2320.085438
ORF1ab/nsp31354F1354FttCttT139139AY.540.013253
ORF1ab/nsp31354F1354FttCttT130130B.1.20.001145
ORF1ab/nsp31354F1354FttCttT118118B.1.1.1280.836879
ORF1ab/nsp31354F1354FttCttT114114B.1.1.2220.023256
ORF1ab/nsp31354F1354FttCttT105105P.10.001654
ORF1ab/nsp31354F1354FttCttT101101AY.1200.003755
ORF1ab/nsp31354F1354FttCttT9090AY.250.000541
ORF1ab/nsp31354F1354FttCttT9090B.1.4270.004545
ORF1ab/nsp31354F1354FttCttT7474AY.50.001528
ORF1ab/nsp31354F1354FttCttT7373B.1.1.3750.869048
ORF1ab/nsp31354F1354FttCttT7272AY.360.010671
ORF1ab/nsp31354F1354FttCttT7070B.1.10.00127
ORF1ab/nsp31354F1354FttCttT6969AY.140.006073
ORF1ab/nsp31354F1354FttCttT6868AY.30.000676
ORF1ab/nsp31354F1354FttCttT6868B.1.1600.002121
ORF1ab/nsp31354F1354FttCttT6363AY.440.000383
ORF1ab/nsp31354F1354FttCttT6262P.20.011571
ORF1ab/nsp31354F1354FttCttT4949B.1.4290.001153
ORF1ab/nsp31354F1354FttCttT4747AY.700.0098
ORF1ab/nsp31354F1354FttCttT4040B.1.177.450.01525
ORF1ab/nsp31354F1354FttCttT3434B.1.2340.004486
ORF1ab/nsp31354F1354FttCttT3333B.1.1770.000435
ORF1ab/nsp31354F1354FttCttT3333B.1.177.600.007208
ORF1ab/nsp31354F1354FttCttT3131AY.290.000489
ORF1ab/nsp31354F1354FttCttT3030AY.1020.000795
ORF1ab/nsp31354F1354FttCttT3030B.1.2430.002088
ORF1ab/nsp31354F1354FttCttT3030B.1.3480.545455
ORF1ab/nsp31354F1354FttCttT2828B.1.1.5190.001112
ORF1ab/nsp31354F1354FttCttT2727AY.330.001803
ORF1ab/nsp31354F1354FttCttT2424AY.260.000679
ORF1ab/nsp31354F1354FttCttT2121AY.200.000816
ORF1ab/nsp31354F1354FttCttT2121B.1.6370.001535
ORF1ab/nsp31354F1354FttCttT1919AY.90.001284
ORF1ab/nsp31354F1354FttCttT1919B.1.1.2140.001054
ORF1ab/nsp31354F1354FttCttT1919B.1.5640.008092
ORF1ab/nsp31354F1354FttCttT1919B.1.5880.017288
ORF1ab/nsp31354F1354FttCttT1818B.1.3510.000535
ORF1ab/nsp31354F1354FttCttT1717AY.920.004884
ORF1ab/nsp31354F1354FttCttT1616AY.1140.003698
ORF1ab/nsp31354F1354FttCttT1616AY.1190.000565
ORF1ab/nsp31354F1354FttCttT1616C.370.001857
ORF1ab/nsp31354F1354FttCttT1515AY.34.10.007649
ORF1ab/nsp31354F1354FttCttT1515AY.98.10.000726
ORF1ab/nsp31354F1354FttCttT1414AY.4.20.000304
ORF1ab/nsp31354F1354FttCttT1414B.1.5820.006869
ORF1ab/nsp31354F1354FttCttT1313AY.340.001261
ORF1ab/nsp31354F1354FttCttT1313B.1.2210.000923
ORF1ab/nsp31354F1354FttCttT1313C.1.11
ORF1ab/nsp31354F1354FttCttT1212AY.1180.000752
ORF1ab/nsp31354F1354FttCttT1212B.1.1.630.00463
ORF1ab/nsp31354F1354FttCttT1212P.1.70.003831
ORF1ab/nsp31354F1354FttCttT1111AY.3.10.000938
ORF1ab/nsp31354F1354FttCttT1111AY.60.000452
ORF1ab/nsp31354F1354FttCttT1111B.1.1110.012926
ORF1ab/nsp31354F1354FttCttT1111B.1.930.010271
ORF1ab/nsp31354F1354FttCttT1111P.1.150.002556
ORF1ab/nsp31354F1354FttCttT1010AY.9.20.000367
ORF1ab/nsp31354F1354FttCttT1010B.1.1.1760.004394
ORF1ab/nsp31354F1354FttCttT1010B.1.2580.000665
ORF1ab/nsp31354F1354FttCttT99AY.420.000362
ORF1ab/nsp31354F1354FttCttT99AY.710.004276
ORF1ab/nsp31354F1354FttCttT99B.1.1.100.010033
ORF1ab/nsp31354F1354FttCttT99B.1.3110.002471
ORF1ab/nsp31354F1354FttCttT99B.1.36.170.004447
ORF1ab/nsp31354F1354FttCttT88AY.1070.003728
ORF1ab/nsp31354F1354FttCttT88AY.450.000973
ORF1ab/nsp31354F1354FttCttT88B.1.1.10.002614
ORF1ab/nsp31354F1354FttCttT88B.1.177.440.004152
ORF1ab/nsp31354F1354FttCttT88B.1.177.620.009535
ORF1ab/nsp31354F1354FttCttT88B.1.2400.001725
ORF1ab/nsp31354F1354FttCttT88B.1.4360.00823
ORF1ab/nsp31354F1354FttCttT77AY.1160.002007
ORF1ab/nsp31354F1354FttCttT77AY.650.003731
ORF1ab/nsp31354F1354FttCttT77B.1.1280.004447
ORF1ab/nsp31354F1354FttCttT77B.1.177.150.004416
ORF1ab/nsp31354F1354FttCttT77P.1.50.538462
ORF1ab/nsp31354F1354FttCttT66AY.39.10.000238
ORF1ab/nsp31354F1354FttCttT66AY.460.000624
ORF1ab/nsp31354F1354FttCttT66AY.46.60.000433
ORF1ab/nsp31354F1354FttCttT66AY.620.002614
ORF1ab/nsp31354F1354FttCttT66AY.730.003992
ORF1ab/nsp31354F1354FttCttT66AY.980.000474
ORF1ab/nsp31354F1354FttCttT66AY.99.20.000553
ORF1ab/nsp31354F1354FttCttT66B.1.1.250.003411
ORF1ab/nsp31354F1354FttCttT66B.1.1.3060.00263
ORF1ab/nsp31354F1354FttCttT66B.1.4390.035503
ORF1ab/nsp31354F1354FttCttT66B.1.6210.000531
ORF1ab/nsp31354F1354FttCttT66B.30.004983
ORF1ab/nsp31354F1354FttCttT55AY.1000.00023
ORF1ab/nsp31354F1354FttCttT55B0.000639
ORF1ab/nsp31354F1354FttCttT55B.1.1.4340.001743
ORF1ab/nsp31354F1354FttCttT55B.1.360.00073
ORF1ab/nsp31354F1354FttCttT55B.1.4000.002145
ORF1ab/nsp31354F1354FttCttT55B.1.4700.007022
ORF1ab/nsp31354F1354FttCttT55B.1.5250.000566
ORF1ab/nsp31354F1354FttCttT55B.1.5960.000436
ORF1ab/nsp31354F1354FttCttT55D.20.000375
ORF1ab/nsp31354F1354FttCttT55Q.10.000632
ORF1ab/nsp31354F1354FttCttT44AY.1170.000338
ORF1ab/nsp31354F1354FttCttT44AY.130.000644
ORF1ab/nsp31354F1354FttCttT44AY.380.001997
ORF1ab/nsp31354F1354FttCttT44AY.750.000224
ORF1ab/nsp31354F1354FttCttT44B.1.1.330.001684
ORF1ab/nsp31354F1354FttCttT44B.1.1040.01476
ORF1ab/nsp31354F1354FttCttT44B.1.177.430.005908
ORF1ab/nsp31354F1354FttCttT44B.1.2290.038835
ORF1ab/nsp31354F1354FttCttT44B.1.6090.001918
ORF1ab/nsp31354F1354FttCttT33AY.160.001139
ORF1ab/nsp31354F1354FttCttT33AY.16.10.00141
ORF1ab/nsp31354F1354FttCttT33AY.4.50.000322
ORF1ab/nsp31354F1354FttCttT33AY.630.001161
ORF1ab/nsp31354F1354FttCttT33AY.75.10.000541
ORF1ab/nsp31354F1354FttCttT33B.1.1.1740.010135
ORF1ab/nsp31354F1354FttCttT33B.1.1.2430.012245
ORF1ab/nsp31354F1354FttCttT33B.1.1.2840.000322
ORF1ab/nsp31354F1354FttCttT33B.1.177.570.000843
ORF1ab/nsp31354F1354FttCttT33B.1.3690.000856
ORF1ab/nsp31354F1354FttCttT33B.1.4280.003061
ORF1ab/nsp31354F1354FttCttT33B.1.5970.013889
ORF1ab/nsp31354F1354FttCttT33P.1.140.000143
ORF1ab/nsp31354F1354FttCttT33P.1.90.014423
ORF1ab/nsp31354F1354FttCttT33Q.20.00184
ORF1ab/nsp31354F1354FttCttT33Q.70.003333
ORF1ab/nsp31354F1354FttCttT22A.2.5.30.020619
ORF1ab/nsp31354F1354FttCttT22AH.30.007605
ORF1ab/nsp31354F1354FttCttT22AY.1050.001286
ORF1ab/nsp31354F1354FttCttT22AY.1130.000285
ORF1ab/nsp31354F1354FttCttT22AY.120.000632
ORF1ab/nsp31354F1354FttCttT22AY.230.000139
ORF1ab/nsp31354F1354FttCttT22AY.240.000862
ORF1ab/nsp31354F1354FttCttT22AY.270.000129
ORF1ab/nsp31354F1354FttCttT22AY.410.000588
ORF1ab/nsp31354F1354FttCttT22AY.5.40.000553
ORF1ab/nsp31354F1354FttCttT22AY.520.001629
ORF1ab/nsp31354F1354FttCttT22AY.600.001876
ORF1ab/nsp31354F1354FttCttT22AY.850.000854
ORF1ab/nsp31354F1354FttCttT22AY.9.10.000167
ORF1ab/nsp31354F1354FttCttT22AY.910.001461
ORF1ab/nsp31354F1354FttCttT22B.1.1.1350.00939
ORF1ab/nsp31354F1354FttCttT22B.1.1.1980.002937
ORF1ab/nsp31354F1354FttCttT22B.1.1.2630.003115
ORF1ab/nsp31354F1354FttCttT22B.1.1.3040.005618
ORF1ab/nsp31354F1354FttCttT22B.1.1.3070.005063
ORF1ab/nsp31354F1354FttCttT22B.1.1.3550.030769
ORF1ab/nsp31354F1354FttCttT22B.1.1.3620.011236
ORF1ab/nsp31354F1354FttCttT22B.1.1.370.000386
ORF1ab/nsp31354F1354FttCttT22B.1.1.4860.003155
ORF1ab/nsp31354F1354FttCttT22B.1.1.500.001358
ORF1ab/nsp31354F1354FttCttT22B.1.177.160.001329
ORF1ab/nsp31354F1354FttCttT22B.1.177.210.000153
ORF1ab/nsp31354F1354FttCttT22B.1.177.320.002699
ORF1ab/nsp31354F1354FttCttT22B.1.258.110.000793
ORF1ab/nsp31354F1354FttCttT22B.1.258.170.000208
ORF1ab/nsp31354F1354FttCttT22B.1.3620.003082
ORF1ab/nsp31354F1354FttCttT22B.1.438.10.000215
ORF1ab/nsp31354F1354FttCttT22B.1.4510.016393
ORF1ab/nsp31354F1354FttCttT22B.1.4740.003802
ORF1ab/nsp31354F1354FttCttT22B.1.5240.002813
ORF1ab/nsp31354F1354FttCttT22B.1.5750.000607
ORF1ab/nsp31354F1354FttCttT22B.1.5950.000522
ORF1ab/nsp31354F1354FttCttT22B.1.6190.001742
ORF1ab/nsp31354F1354FttCttT22B.400.000729
ORF1ab/nsp31354F1354FttCttT22C.60.074074
ORF1ab/nsp31354F1354FttCttT22P.1.170.000324
ORF1ab/nsp31354F1354FttCttT22Q.30.00029
ORF1ab/nsp31354F1354FttCttT22Q.80.00033
ORF1ab/nsp31354F1354FttCttT22R.10.00018
ORF1ab/nsp31354F1354FttCttT110.055556
ORF1ab/nsp31354F1354FttCttT11A.10.000282
ORF1ab/nsp31354F1354FttCttT11A.180.05
ORF1ab/nsp31354F1354FttCttT11A.2.20.001689
ORF1ab/nsp31354F1354FttCttT11A.2.5.20.001572
ORF1ab/nsp31354F1354FttCttT11AU.20.002421
ORF1ab/nsp31354F1354FttCttT11AY.1060.000335
ORF1ab/nsp31354F1354FttCttT11AY.1080.001103
ORF1ab/nsp31354F1354FttCttT11AY.1090.00074
ORF1ab/nsp31354F1354FttCttT11AY.1100.000113
ORF1ab/nsp31354F1354FttCttT11AY.1210.000135
ORF1ab/nsp31354F1354FttCttT11AY.170.008197
ORF1ab/nsp31354F1354FttCttT11AY.20.000356
ORF1ab/nsp31354F1354FttCttT11AY.23.10.000417
ORF1ab/nsp31354F1354FttCttT11AY.370.000316
ORF1ab/nsp31354F1354FttCttT11AY.4.10.000737
ORF1ab/nsp31354F1354FttCttT11AY.4.2.10.000149
ORF1ab/nsp31354F1354FttCttT11AY.46.50.000198
ORF1ab/nsp31354F1354FttCttT11AY.5.30.000337
ORF1ab/nsp31354F1354FttCttT11AY.510.000909
ORF1ab/nsp31354F1354FttCttT11AY.530.000288
ORF1ab/nsp31354F1354FttCttT11AY.590.00053
ORF1ab/nsp31354F1354FttCttT11AY.610.000105
ORF1ab/nsp31354F1354FttCttT11AY.670.000464
ORF1ab/nsp31354F1354FttCttT11AY.690.000187
ORF1ab/nsp31354F1354FttCttT11AY.7.10.000113
ORF1ab/nsp31354F1354FttCttT11AY.740.000116
ORF1ab/nsp31354F1354FttCttT11AY.790.001211
ORF1ab/nsp31354F1354FttCttT11AY.820.001357
ORF1ab/nsp31354F1354FttCttT11AY.900.000684
ORF1ab/nsp31354F1354FttCttT11AY.99.10.001553
ORF1ab/nsp31354F1354FttCttT11AZ.60.008403
ORF1ab/nsp31354F1354FttCttT11B.1.1.1810.004545
ORF1ab/nsp31354F1354FttCttT11B.1.1.2040.00304
ORF1ab/nsp31354F1354FttCttT11B.1.1.2160.00089
ORF1ab/nsp31354F1354FttCttT11B.1.1.2200.001859
ORF1ab/nsp31354F1354FttCttT11B.1.1.2210.010101
ORF1ab/nsp31354F1354FttCttT11B.1.1.2800.003086
ORF1ab/nsp31354F1354FttCttT11B.1.1.3160.000925
ORF1ab/nsp31354F1354FttCttT11B.1.1.3180.000302
ORF1ab/nsp31354F1354FttCttT11B.1.1.340.013158
ORF1ab/nsp31354F1354FttCttT11B.1.1.3480.000796
ORF1ab/nsp31354F1354FttCttT11B.1.1.3720.000689
ORF1ab/nsp31354F1354FttCttT11B.1.1.3910.008547
ORF1ab/nsp31354F1354FttCttT11B.1.1.3980.003226
ORF1ab/nsp31354F1354FttCttT11B.1.1.4090.002833
ORF1ab/nsp31354F1354FttCttT11B.1.1.4160.000905
ORF1ab/nsp31354F1354FttCttT11B.1.1.4480.002033
ORF1ab/nsp31354F1354FttCttT11B.1.1.4640.001473
ORF1ab/nsp31354F1354FttCttT11B.1.1.470.005348
ORF1ab/nsp31354F1354FttCttT11B.1.1.540.003021
ORF1ab/nsp31354F1354FttCttT11B.1.1.700.000341
ORF1ab/nsp31354F1354FttCttT11B.1.1.80.003584
ORF1ab/nsp31354F1354FttCttT11B.1.1060.03125
ORF1ab/nsp31354F1354FttCttT11B.1.110.30.000718
ORF1ab/nsp31354F1354FttCttT11B.1.1260.001276
ORF1ab/nsp31354F1354FttCttT11B.1.160.150.00495
ORF1ab/nsp31354F1354FttCttT11B.1.160.200.008929
ORF1ab/nsp31354F1354FttCttT11B.1.177.170.000821
ORF1ab/nsp31354F1354FttCttT11B.1.177.20.004545
ORF1ab/nsp31354F1354FttCttT11B.1.177.350.000691
ORF1ab/nsp31354F1354FttCttT11B.1.177.40.000211
ORF1ab/nsp31354F1354FttCttT11B.1.177.400.005155
ORF1ab/nsp31354F1354FttCttT11B.1.177.50.001242
ORF1ab/nsp31354F1354FttCttT11B.1.177.510.004566
ORF1ab/nsp31354F1354FttCttT11B.1.177.530.002392
ORF1ab/nsp31354F1354FttCttT11B.1.177.550.002331
ORF1ab/nsp31354F1354FttCttT11B.1.177.70.000165
ORF1ab/nsp31354F1354FttCttT11B.1.177.740.015152
ORF1ab/nsp31354F1354FttCttT11B.1.177.750.001041
ORF1ab/nsp31354F1354FttCttT11B.1.177.790.002342
ORF1ab/nsp31354F1354FttCttT11B.1.177.810.000189
ORF1ab/nsp31354F1354FttCttT11B.1.177.820.000477
ORF1ab/nsp31354F1354FttCttT11B.1.177.90.001332
ORF1ab/nsp31354F1354FttCttT11B.1.1820.007246
ORF1ab/nsp31354F1354FttCttT11B.1.2180.005155
ORF1ab/nsp31354F1354FttCttT11B.1.2270.047619
ORF1ab/nsp31354F1354FttCttT11B.1.2350.002519
ORF1ab/nsp31354F1354FttCttT11B.1.2360.002053
ORF1ab/nsp31354F1354FttCttT11B.1.2410.000812
ORF1ab/nsp31354F1354FttCttT11B.1.258.160.001637
ORF1ab/nsp31354F1354FttCttT11B.1.2650.001271
ORF1ab/nsp31354F1354FttCttT11B.1.2740.011905
ORF1ab/nsp31354F1354FttCttT11B.1.3190.003049
ORF1ab/nsp31354F1354FttCttT11B.1.3200.001245
ORF1ab/nsp31354F1354FttCttT11B.1.3240.001605
ORF1ab/nsp31354F1354FttCttT11B.1.3360.002439
ORF1ab/nsp31354F1354FttCttT11B.1.3380.008621
ORF1ab/nsp31354F1354FttCttT11B.1.3400.004292
ORF1ab/nsp31354F1354FttCttT11B.1.350.008475
ORF1ab/nsp31354F1354FttCttT11B.1.351.50.0006
ORF1ab/nsp31354F1354FttCttT11B.1.36.10.00114
ORF1ab/nsp31354F1354FttCttT11B.1.36.180.00042
ORF1ab/nsp31354F1354FttCttT11B.1.36.310.001751
ORF1ab/nsp31354F1354FttCttT11B.1.3990.001934
ORF1ab/nsp31354F1354FttCttT11B.1.4040.001302
ORF1ab/nsp31354F1354FttCttT11B.1.4090.000781
ORF1ab/nsp31354F1354FttCttT11B.1.466.10.007194
ORF1ab/nsp31354F1354FttCttT11B.1.466.20.000391
ORF1ab/nsp31354F1354FttCttT11B.1.5090.000866
ORF1ab/nsp31354F1354FttCttT11B.1.5610.000397
ORF1ab/nsp31354F1354FttCttT11B.1.564.10.001577
ORF1ab/nsp31354F1354FttCttT11B.1.5650.00081
ORF1ab/nsp31354F1354FttCttT11B.1.6000.005848
ORF1ab/nsp31354F1354FttCttT11B.1.617.10.000129
ORF1ab/nsp31354F1354FttCttT11B.1.6200.000946
ORF1ab/nsp31354F1354FttCttT11B.1.6250.002353
ORF1ab/nsp31354F1354FttCttT11B.1.9.50.005682
ORF1ab/nsp31354F1354FttCttT11C.10.002392
ORF1ab/nsp31354F1354FttCttT11C.160.00106
ORF1ab/nsp31354F1354FttCttT11C.180.002591
ORF1ab/nsp31354F1354FttCttT11C.260.007353
ORF1ab/nsp31354F1354FttCttT11C.36.30.000567
ORF1ab/nsp31354F1354FttCttT11L.20.011364
ORF1ab/nsp31354F1354FttCttT11P.1.10.000318
ORF1ab/nsp31354F1354FttCttT11P.1.100.000269
ORF1ab/nsp31354F1354FttCttT11P.1.120.000484
ORF1ab/nsp31354F1354FttCttT11P.40.003802
ORF1ab/nsp31354F1354FttCttT11W.40.001351