CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = F1142S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31142F1142SF1960SnonsyntTctCc28230.8214296143-6145
ORF1ab/nsp31142F1142SF1960SnonsyntTCtCT2850.1785716143-6145

Details of the mutation F1142S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31142F1142StTctCc2328All0.000004
ORF1ab/nsp31142F1142StTCtCT528All0.000001
ORF1ab/nsp31142F1142StTctCc55B.1.1.70.000004
ORF1ab/nsp31142F1142StTctCc33B.1.20.000026
ORF1ab/nsp31142F1142StTctCc22AY.250.000012
ORF1ab/nsp31142F1142StTctCc12AY.440.000006
ORF1ab/nsp31142F1142StTCtCT12AY.440.000006
ORF1ab/nsp31142F1142StTctCc22B0.000256
ORF1ab/nsp31142F1142StTctCc22B.10.000018
ORF1ab/nsp31142F1142StTCtCT22B.1.617.20.000008
ORF1ab/nsp31142F1142StTctCc11A.20.000662
ORF1ab/nsp31142F1142StTctCc11AY.1030.000006
ORF1ab/nsp31142F1142StTctCc11AY.40.000002
ORF1ab/nsp31142F1142StTctCc11AY.430.000004
ORF1ab/nsp31142F1142StTCtCT11AY.46.60.000072
ORF1ab/nsp31142F1142StTctCc11B.1.1.2940.001266
ORF1ab/nsp31142F1142StTCtCT11B.1.2580.000067
ORF1ab/nsp31142F1142StTctCc11B.1.3960.000706
ORF1ab/nsp31142F1142StTctCc11B.1.5650.00081
ORF1ab/nsp31142F1142StTctCc11D.20.000075