CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = E92del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp392E92del1E910del1delgaGga-650.8333332993-2995
ORF1ab/nsp392E92del1E910del1delgAgg-g610.1666672993-2995

Details of the mutation E92del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp392E92del1gaGga-56All0.000001
ORF1ab/nsp392E92del1gAgg-g16All0
ORF1ab/nsp392E92del1gaGga-11B0.000128
ORF1ab/nsp392E92del1gaGga-11B.1.10.000018
ORF1ab/nsp392E92del1gaGga-11B.1.177.860.000183
ORF1ab/nsp392E92del1gaGga-11B.1.20.000009
ORF1ab/nsp392E92del1gAgg-g11B.1.617.20.000004
ORF1ab/nsp392E92del1gaGga-11B.390.002331