CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = E378del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3378E378del1E1196del1delgAag-a860.753851-3853
ORF1ab/nsp3378E378del1E1196del1delgaAga-810.1253851-3853
ORF1ab/nsp3378E378del1E1196del1delGaa-aa810.1253851-3853

Details of the mutation E378del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3378E378del1gAag-a68All0.000001
ORF1ab/nsp3378E378del1gaAga-18All0
ORF1ab/nsp3378E378del1Gaa-aa18All0
ORF1ab/nsp3378E378del1gAag-a22B.1.617.20.000008
ORF1ab/nsp3378E378del1gAag-a11AY.1200.000037
ORF1ab/nsp3378E378del1gaAga-11AY.40.000002
ORF1ab/nsp3378E378del1gAag-a11B0.000128
ORF1ab/nsp3378E378del1Gaa-aa11B.10.000009
ORF1ab/nsp3378E378del1gAag-a11B.1.1.2980.000862
ORF1ab/nsp3378E378del1gAag-a11B.1.20.000009